Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022817
CDS Infomation

pacid=37457933 polypeptide=PGSC0003DMP400015541 locus=PGSC0003DMG400008852 ID=PGSC0003DMT400022817.v4.03 annot-version=v4.03
Sequence

ATGTCTCTATCTGTTCCTCACTTCATCTCTGTCAGCAGATTTTCAGACCTCAATGGTGTA
AAGGTACGTGGTTCGCCAAGGTGTTTTCAGAGAGATTGTAAAGTATTTACAGTTATATCA
ATGTCAAAAGAGGCATCAAATTATATACCAGCAGCGCCTATATTTCTCCCTGAAGGACCA
TGGCAACAGATTCCAGGTGGTGTTACTGCTGCAAAGGGTTTCAAAGCTGCTGGGATGTAT
GGTGGATTGCGTGCTCTTGGAGAGAAACCTGATCTCGCACTTGTCACTTGTGATGTAGAT
GCCATATCTGCAGGGGCATTTACTACAAATGTTGTTGCAGCTGCACCTGTACTATACTGT
AAAAGCGCACTAAATGCATCTAAAACGGCTCGTGCGGTATTAATAAATGCTGGTCAAGCT
AATGCAGCAACGGGTGATGCAGGTTATCAAGATGTAATAGAGTGCTCAAGTGCACTAGCT
AAGTTACTTCAACTGAAGCAAGACGAAGTCTTGATCGAATCAACTGGTGTAATAGGTCAA
AGAATAAAGAAGGAAGCACTTCTCAACTCACTCCCACATCTTGTTAAACAGCTTTCACCA
ACCGTGGAGGGGGCAAATTCTGCAGCTGTAGCTATAACGACCACTGATCTTGTTAGTAAG
AGTGTGGCTGTTGAAACAGAGGTAAGAGGAACTCGAATCAGAGTTGGGGGCATGGCAAAG
GGTTCTGGGATGATTCATCCTAACATGGCAACAATGCTTGGTGTGGTAACTACTGATGCC
TCGGTTACAAGTGATGTTTGGAAAAAGATGGTACAAGTTGCTGTAAATCGAAGTTTTAAT
CAAATTACTGTTGATGGAGACACTAGTACAAATGATGCTGTCATTGCTCTTGCCAGTGGA
CTTTCAGAATCATATGAGATTTCTTCTTTGAACTCCTCCGAGGCAGAACACCTACAAAAC
TGCCTTGATGCTGTAATGCAGGGTCTAGCAAAATCAATAGCTTGGGATGGCGAAGGAGCA
ACATGTTTGATTGAGGTGAGGGTTGATGGTGCTGATAACGAAGCTGAAGCAGCAAAGATT
GCACGTTCAGTGGCTTCCTCTTCACTTGTCAAGGCTGCTGTATACGGTAGGGATCCAAAT
TGGGGCCGTATTGCTTGTGCTGCTGGCTATGCAGGTATCCCTTTCAACGCCGACAAGCTT
CGGATATCACTTGGAGATATTGTGCTTATGGAAGCAGGGCAACCACTTCCATTTGATAGG
GTTGCAGCTAGCAATTATCTCCGAAAGGCTGGTGAAGTCCATGGCACTGTTGAAATCCAA
ATATCTATTGGTGATGGTCCAGGAAGCGGACTAGCATGGGGCTGTGACTTGAGTTATGAT
TATGTCAAAATTAACGCAGAGTACACAACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400015541
PEP Infomation

pacid=37457933 transcript=PGSC0003DMT400022817 locus=PGSC0003DMG400008852 ID=PGSC0003DMT400022817.v4.03 annot-version=v4.03
Sequence

MSLSVPHFISVSRFSDLNGVKVRGSPRCFQRDCKVFTVISMSKEASNYIPAAPIFLPEGP
WQQIPGGVTAAKGFKAAGMYGGLRALGEKPDLALVTCDVDAISAGAFTTNVVAAAPVLYC
KSALNASKTARAVLINAGQANAATGDAGYQDVIECSSALAKLLQLKQDEVLIESTGVIGQ
RIKKEALLNSLPHLVKQLSPTVEGANSAAVAITTTDLVSKSVAVETEVRGTRIRVGGMAK
GSGMIHPNMATMLGVVTTDASVTSDVWKKMVQVAVNRSFNQITVDGDTSTNDAVIALASG
LSESYEISSLNSSEAEHLQNCLDAVMQGLAKSIAWDGEGATCLIEVRVDGADNEAEAAKI
ARSVASSSLVKAAVYGRDPNWGRIACAAGYAGIPFNADKLRISLGDIVLMEAGQPLPFDR
VAASNYLRKAGEVHGTVEIQISIGDGPGSGLAWGCDLSYDYVKINAEYTT*

Transcript Sequence

Transcript ID

PGSC0003DMT400022817
Transcript Infomation

pacid=37457933 locus=PGSC0003DMG400008852 ID=PGSC0003DMT400022817.v4.03 annot-version=v4.03
Sequence

ATGTCTCTATCTGTTCCTCACTTCATCTCTGTCAGCAGATTTTCAGACCTCAATGGTGTA
AAGGTACGTGGTTCGCCAAGGTGTTTTCAGAGAGATTGTAAAGTATTTACAGTTATATCA
ATGTCAAAAGAGGCATCAAATTATATACCAGCAGCGCCTATATTTCTCCCTGAAGGACCA
TGGCAACAGATTCCAGGTGGTGTTACTGCTGCAAAGGGTTTCAAAGCTGCTGGGATGTAT
GGTGGATTGCGTGCTCTTGGAGAGAAACCTGATCTCGCACTTGTCACTTGTGATGTAGAT
GCCATATCTGCAGGGGCATTTACTACAAATGTTGTTGCAGCTGCACCTGTACTATACTGT
AAAAGCGCACTAAATGCATCTAAAACGGCTCGTGCGGTATTAATAAATGCTGGTCAAGCT
AATGCAGCAACGGGTGATGCAGGTTATCAAGATGTAATAGAGTGCTCAAGTGCACTAGCT
AAGTTACTTCAACTGAAGCAAGACGAAGTCTTGATCGAATCAACTGGTGTAATAGGTCAA
AGAATAAAGAAGGAAGCACTTCTCAACTCACTCCCACATCTTGTTAAACAGCTTTCACCA
ACCGTGGAGGGGGCAAATTCTGCAGCTGTAGCTATAACGACCACTGATCTTGTTAGTAAG
AGTGTGGCTGTTGAAACAGAGGTAAGAGGAACTCGAATCAGAGTTGGGGGCATGGCAAAG
GGTTCTGGGATGATTCATCCTAACATGGCAACAATGCTTGGTGTGGTAACTACTGATGCC
TCGGTTACAAGTGATGTTTGGAAAAAGATGGTACAAGTTGCTGTAAATCGAAGTTTTAAT
CAAATTACTGTTGATGGAGACACTAGTACAAATGATGCTGTCATTGCTCTTGCCAGTGGA
CTTTCAGAATCATATGAGATTTCTTCTTTGAACTCCTCCGAGGCAGAACACCTACAAAAC
TGCCTTGATGCTGTAATGCAGGGTCTAGCAAAATCAATAGCTTGGGATGGCGAAGGAGCA
ACATGTTTGATTGAGGTGAGGGTTGATGGTGCTGATAACGAAGCTGAAGCAGCAAAGATT
GCACGTTCAGTGGCTTCCTCTTCACTTGTCAAGGCTGCTGTATACGGTAGGGATCCAAAT
TGGGGCCGTATTGCTTGTGCTGCTGGCTATGCAGGTATCCCTTTCAACGCCGACAAGCTT
CGGATATCACTTGGAGATATTGTGCTTATGGAAGCAGGGCAACCACTTCCATTTGATAGG
GTTGCAGCTAGCAATTATCTCCGAAAGGCTGGTGAAGTCCATGGCACTGTTGAAATCCAA
ATATCTATTGGTGATGGTCCAGGAAGCGGACTAGCATGGGGCTGTGACTTGAGTTATGAT
TATGTCAAAATTAACGCAGAGTACACAACATGA