Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022804
CDS Infomation

pacid=37456784 polypeptide=PGSC0003DMP400015528 locus=PGSC0003DMG400008847 ID=PGSC0003DMT400022804.v4.03 annot-version=v4.03
Sequence

ATGGGGAGTCAAAGTGAAGCAAAACTCAAATTTTGTATCGACAGAGGGGGCACTTTTACT
GATGTCTATGCAGACATTCCTGGTAAACCTGAAGGCCGAGTCATGAAGTTGTTGTCAGTT
GATCCTTCTAATTATGATGATGCTCCAGTTGAAGGAATAAGGAGGATTTTGGAGGAATTT
ACTGGTAAGAAAATTCCCCGTAGTTCAAAGCTTCCTACCGATAAGATAGAATGGGTGAGG
ATGGGTACAACCGTGGCAACAAATGCATTGTTGGAGAGGAAGGGGGAGAGAATTGCACTG
TGTGTCACTCGAGGCTTCAGGGATTTGCTCCAGATTGGTAACCAGGCTCGTCCACATATA
TTTGACCTCACTGTATCAAAACCATCGAATCTGTATGAAGAGGTTGTAGAGGTTGATGAG
AGAGTTGAGCTGGTTCTTGATAAGGAGGGAGTAGATTTGAACCCTTCTCCATCACTTGTT
CAAGGTATTTCGGGCGAGCTTGTCAAGGTTGTAAAGCCACTTGATGAGGAAGCTCTGAAA
CCGTTACTGAATGCTTTGCTGCAAAAGGGTATTAGTTGCTTAGCTGTGGTTTTGCTTCAC
TCTTATACTTACCCAGATCATGAGATACTTCTGGAAAAGTTAGCGCTTAGTTTGGGCTTC
CGGCATGTATCTATATCATCTGCTTTAACTCCTATGGTTCGAGCTGTTCCTCGAGGTTTT
ACAGCAAGTGTAGATGCATATTTGACTCCCGTTATTAAAGAATACTTGTCAGGTTTTATG
TCCAAATTTGATGAAGGACAAGGGAAGTTGAATGTTTTATTCATGCAGTCGGATGGAGGG
CTTGCACCAGAAAATAGATTTTCAGGCCACAAAGCAATTTTGTCAGGTCCTGCTGGTGGT
GTAGTTGGTTACTCTCAGACACTCTTCGGGATTGAAACAGACAAGGCTCTAATCGGTTTC
GACATGGGTGGTACCTCCACTGATGTCAGCCGATATGCTGGTAGCTATGAACAAGTTATA
GAAACCCAGGTTGCTGGTGCAATAATTCAAGCACCTCAGCTCGATGTAAACACAGTCGCT
GCTGGCGGTGGATCAAAGTTAAAATTTCAGTTTGGTTCTTTCCGGGTGGGACCAGATTCA
GTGGGTGCACATCCAGGACCAGTTTGTTACAGGAAAGGAGGGCAACTAGCAGTTACAGAT
GCAAATCTTATTTTGGGTTATGTCATTCCTGAATTTTTCCCTTCCATTTTTGGTCCCAAT
GAAGACCAGCCATTAGATATTGATGCTACCAGGGAAGATTTTGAAAAACTTGCAAGGCAA
ATCAATTCCTACAGAAAGAGCCAGGATTCATCTGCGAGGGACATGACAGTTGAGGAGATT
GCACAAGGCTTTGTGAATGTTGCCAATGAGACCATGTGTCGTCCAATACGACAGTTGACA
GAAATGAAGGGCCATGAAACAAGCAACCATGCTCTTGCTTGCTTTGGAGGTGCAGGTCCT
CAACATTCCTGTGCCATTGCTAGATCACTTGGAATGAAGGAGGTTCTTATTCACAGGTTA
TGTGGGATCTTAAGTGCATATGGTATGGGGTTAGCTGATGTGGTAGAAGAGGCACAAGAG
CCATATTCAGCTGTTTATGGTCCTGATTCTGTGATTGAAGCCTGTCGCAGAGAAACTATC
TTGCTGGAGCAGGTGAAGTCTAAGCTGCAGGAGCAAGGGTTCGGAGAAGCAAGTATCACC
AGTGAAACATACTTAAACTTAAGGTACGAGGGAACAGACACCGCAATCATGGTAAAGAGA
CCAATCAATGATGATGGATCAGGAGGTGATTATGCTGCTGAATTTGTCAAGTTGTTCCAA
CGGGAATATGGATTTAAACTTCAAAACAGGAGTATAGTCATATGTGATGTTAGGGTTCGC
GGTGTTGGAGTCACTAACATACTGAAGCCTCGAGCCCTAGATGCTGCCCCTGGTGCCCCT
AAAATTGAAAGTCACTACAAGGTTTACTTTGAGAGTGGATGGAATGACACTCCTTTGTTC
AAGCTTGAAAATTTGGCATGTGGGCATGTTCTTCCTGGCCCAGCAATTATCATGAATGGC
AATAGTACTGTCATTGTTGAACCTAACTGCAAGGCCATTGTTACTAAATATGGTAACATT
AAAATAGAGATAGAGTCGACTTTCAATACGGCGAAGGTAGATGAAAAAGTTGCAGATGTT
GTACAGCTGTCAATTTTCAACAACCGGTTTATGGGAATAGCTGAACAGATGGGGCGCACC
TTGCAGAGGACTTCTATATCAACAAATATTAAAGAGCGGCTAGACTTTTCTTGTGCACTT
TTTGGCCATGATGGTGGGCTTGTGGCAAATGCACCCCATGTTCCTGTTCACTTGGGGGCT
ATGTCGAGCACCGTTCGATGGCAGCTGAAGTACTGGGGTGATAAACTAAATGAGGGAGAT
GTTTTAGTCACCAATCATCCTTCTGCTGGTGGTAGCCACTTGCCTGATATAACTGTTATT
ACACCTGTTTTTAACAAAGGTAGATTGATATTCTTTGTCGCAAGTAGAGGGCATCATGCA
GAGATTGGAGGTATTACTCCTGGAAGTATGCCACCTTTCTCAAAGTTCATATGGGAGGAA
GGAGCAGCAATAAAAACATTCAAGCTTGTTGAGAAGGGCATTTTTCAGGAAGAAGGAATC
ACCAAGCTTCTTTGTTACCCCTGTTCTGAAGAATCAACTCATAAGATTCCAGGGTCGCGC
AGGCTTCAGGATAATTTATCTGACCTTCACGCACAAGTAGCTGCAAATCAGAGAGGAATT
ACCCTTATTAATGAGCTTATTGAGCAATACGGTCTGGAAACTGTACAGGCATACATGAAC
CATGTACAGGCTAATGCTGAAGAAGCAGTGAGAGAAATGCTTAAATCTGTTGCTGGGAGA
GTTTCCTCCGAATCAAAAAGGTCTGCAGAGGGAGACTTAGTGACTATCGAAGAGGAAGAT
TACATGGATGATGGGTCTTCCATACACTTAAAGCTTACGATAGATTCTCGGAAGGGTGAA
GCATTTTTTGATTTCTCTGGGACCAGCACAGAGGTTTATGGTAATTGGAATGCTCCAGAA
GCAGTGACAGCTGCTGCAGTTATTTACTGTGTACGCTGTTTGGTGAATGTTGATATTCCT
CTCAATCAAGGTTGCTTGGCTCCTGTAAAGATTTATATACCTCCTGGTTCATTTCTCTCT
CCAAGTGACAAGGCTGCTGTGGTGGGTGGTAACGTTCTTACGTCACAAAGGGTCACCGAT
GTCGTTCTCACTGCATTCCAAGCTTGTGCTTGTTCCCAGGGTTGCATGAATAATCTAACC
TTTGGTGATGACACTTTTGGTTACTATGAAACAATCGGAGGTGGAAGTGGGGCTGGACCT
ACATGGGATGGGACGAGTGCAGTCCAGTGCCATATGACCAACACTCGCATGACAGATCCA
GAGATCTTTGAGCAAAGATACCCAGTTATATTGCATAAGTTTGGAATAAGAGAGAATAGT
GGTGGTGCTGGTCAACATAAAGGAGGTGATGGCATTATCAGGGAGATAGAATTCAAACGT
CCAGTCATCGTCAGTATCCTTTCAGAAAGACGTGTGCATGCCCCAAGGGGACTCATGGGT
GGAGCAGATGGGGCTCGGGGTGCTAATTTCCTCATCACCAAAGATAAAAGGAAGGTATAT
GTTGGTGGTAAAAACACAATTGAGGTGCAGGCTGGCGAAATACTTCAGATTCTTACTCCA
GGAGGTGGTGGCTGGGGTTCAATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400015528
PEP Infomation

pacid=37456784 transcript=PGSC0003DMT400022804 locus=PGSC0003DMG400008847 ID=PGSC0003DMT400022804.v4.03 annot-version=v4.03
Sequence

MGSQSEAKLKFCIDRGGTFTDVYADIPGKPEGRVMKLLSVDPSNYDDAPVEGIRRILEEF
TGKKIPRSSKLPTDKIEWVRMGTTVATNALLERKGERIALCVTRGFRDLLQIGNQARPHI
FDLTVSKPSNLYEEVVEVDERVELVLDKEGVDLNPSPSLVQGISGELVKVVKPLDEEALK
PLLNALLQKGISCLAVVLLHSYTYPDHEILLEKLALSLGFRHVSISSALTPMVRAVPRGF
TASVDAYLTPVIKEYLSGFMSKFDEGQGKLNVLFMQSDGGLAPENRFSGHKAILSGPAGG
VVGYSQTLFGIETDKALIGFDMGGTSTDVSRYAGSYEQVIETQVAGAIIQAPQLDVNTVA
AGGGSKLKFQFGSFRVGPDSVGAHPGPVCYRKGGQLAVTDANLILGYVIPEFFPSIFGPN
EDQPLDIDATREDFEKLARQINSYRKSQDSSARDMTVEEIAQGFVNVANETMCRPIRQLT
EMKGHETSNHALACFGGAGPQHSCAIARSLGMKEVLIHRLCGILSAYGMGLADVVEEAQE
PYSAVYGPDSVIEACRRETILLEQVKSKLQEQGFGEASITSETYLNLRYEGTDTAIMVKR
PINDDGSGGDYAAEFVKLFQREYGFKLQNRSIVICDVRVRGVGVTNILKPRALDAAPGAP
KIESHYKVYFESGWNDTPLFKLENLACGHVLPGPAIIMNGNSTVIVEPNCKAIVTKYGNI
KIEIESTFNTAKVDEKVADVVQLSIFNNRFMGIAEQMGRTLQRTSISTNIKERLDFSCAL
FGHDGGLVANAPHVPVHLGAMSSTVRWQLKYWGDKLNEGDVLVTNHPSAGGSHLPDITVI
TPVFNKGRLIFFVASRGHHAEIGGITPGSMPPFSKFIWEEGAAIKTFKLVEKGIFQEEGI
TKLLCYPCSEESTHKIPGSRRLQDNLSDLHAQVAANQRGITLINELIEQYGLETVQAYMN
HVQANAEEAVREMLKSVAGRVSSESKRSAEGDLVTIEEEDYMDDGSSIHLKLTIDSRKGE
AFFDFSGTSTEVYGNWNAPEAVTAAAVIYCVRCLVNVDIPLNQGCLAPVKIYIPPGSFLS
PSDKAAVVGGNVLTSQRVTDVVLTAFQACACSQGCMNNLTFGDDTFGYYETIGGGSGAGP
TWDGTSAVQCHMTNTRMTDPEIFEQRYPVILHKFGIRENSGGAGQHKGGDGIIREIEFKR
PVIVSILSERRVHAPRGLMGGADGARGANFLITKDKRKVYVGGKNTIEVQAGEILQILTP
GGGGWGSI*

Transcript Sequence

Transcript ID

PGSC0003DMT400022804
Transcript Infomation

pacid=37456784 locus=PGSC0003DMG400008847 ID=PGSC0003DMT400022804.v4.03 annot-version=v4.03
Sequence

ATGGGGAGTCAAAGTGAAGCAAAACTCAAATTTTGTATCGACAGAGGGGGCACTTTTACT
GATGTCTATGCAGACATTCCTGGTAAACCTGAAGGCCGAGTCATGAAGTTGTTGTCAGTT
GATCCTTCTAATTATGATGATGCTCCAGTTGAAGGAATAAGGAGGATTTTGGAGGAATTT
ACTGGTAAGAAAATTCCCCGTAGTTCAAAGCTTCCTACCGATAAGATAGAATGGGTGAGG
ATGGGTACAACCGTGGCAACAAATGCATTGTTGGAGAGGAAGGGGGAGAGAATTGCACTG
TGTGTCACTCGAGGCTTCAGGGATTTGCTCCAGATTGGTAACCAGGCTCGTCCACATATA
TTTGACCTCACTGTATCAAAACCATCGAATCTGTATGAAGAGGTTGTAGAGGTTGATGAG
AGAGTTGAGCTGGTTCTTGATAAGGAGGGAGTAGATTTGAACCCTTCTCCATCACTTGTT
CAAGGTATTTCGGGCGAGCTTGTCAAGGTTGTAAAGCCACTTGATGAGGAAGCTCTGAAA
CCGTTACTGAATGCTTTGCTGCAAAAGGGTATTAGTTGCTTAGCTGTGGTTTTGCTTCAC
TCTTATACTTACCCAGATCATGAGATACTTCTGGAAAAGTTAGCGCTTAGTTTGGGCTTC
CGGCATGTATCTATATCATCTGCTTTAACTCCTATGGTTCGAGCTGTTCCTCGAGGTTTT
ACAGCAAGTGTAGATGCATATTTGACTCCCGTTATTAAAGAATACTTGTCAGGTTTTATG
TCCAAATTTGATGAAGGACAAGGGAAGTTGAATGTTTTATTCATGCAGTCGGATGGAGGG
CTTGCACCAGAAAATAGATTTTCAGGCCACAAAGCAATTTTGTCAGGTCCTGCTGGTGGT
GTAGTTGGTTACTCTCAGACACTCTTCGGGATTGAAACAGACAAGGCTCTAATCGGTTTC
GACATGGGTGGTACCTCCACTGATGTCAGCCGATATGCTGGTAGCTATGAACAAGTTATA
GAAACCCAGGTTGCTGGTGCAATAATTCAAGCACCTCAGCTCGATGTAAACACAGTCGCT
GCTGGCGGTGGATCAAAGTTAAAATTTCAGTTTGGTTCTTTCCGGGTGGGACCAGATTCA
GTGGGTGCACATCCAGGACCAGTTTGTTACAGGAAAGGAGGGCAACTAGCAGTTACAGAT
GCAAATCTTATTTTGGGTTATGTCATTCCTGAATTTTTCCCTTCCATTTTTGGTCCCAAT
GAAGACCAGCCATTAGATATTGATGCTACCAGGGAAGATTTTGAAAAACTTGCAAGGCAA
ATCAATTCCTACAGAAAGAGCCAGGATTCATCTGCGAGGGACATGACAGTTGAGGAGATT
GCACAAGGCTTTGTGAATGTTGCCAATGAGACCATGTGTCGTCCAATACGACAGTTGACA
GAAATGAAGGGCCATGAAACAAGCAACCATGCTCTTGCTTGCTTTGGAGGTGCAGGTCCT
CAACATTCCTGTGCCATTGCTAGATCACTTGGAATGAAGGAGGTTCTTATTCACAGGTTA
TGTGGGATCTTAAGTGCATATGGTATGGGGTTAGCTGATGTGGTAGAAGAGGCACAAGAG
CCATATTCAGCTGTTTATGGTCCTGATTCTGTGATTGAAGCCTGTCGCAGAGAAACTATC
TTGCTGGAGCAGGTGAAGTCTAAGCTGCAGGAGCAAGGGTTCGGAGAAGCAAGTATCACC
AGTGAAACATACTTAAACTTAAGGTACGAGGGAACAGACACCGCAATCATGGTAAAGAGA
CCAATCAATGATGATGGATCAGGAGGTGATTATGCTGCTGAATTTGTCAAGTTGTTCCAA
CGGGAATATGGATTTAAACTTCAAAACAGGAGTATAGTCATATGTGATGTTAGGGTTCGC
GGTGTTGGAGTCACTAACATACTGAAGCCTCGAGCCCTAGATGCTGCCCCTGGTGCCCCT
AAAATTGAAAGTCACTACAAGGTTTACTTTGAGAGTGGATGGAATGACACTCCTTTGTTC
AAGCTTGAAAATTTGGCATGTGGGCATGTTCTTCCTGGCCCAGCAATTATCATGAATGGC
AATAGTACTGTCATTGTTGAACCTAACTGCAAGGCCATTGTTACTAAATATGGTAACATT
AAAATAGAGATAGAGTCGACTTTCAATACGGCGAAGGTAGATGAAAAAGTTGCAGATGTT
GTACAGCTGTCAATTTTCAACAACCGGTTTATGGGAATAGCTGAACAGATGGGGCGCACC
TTGCAGAGGACTTCTATATCAACAAATATTAAAGAGCGGCTAGACTTTTCTTGTGCACTT
TTTGGCCATGATGGTGGGCTTGTGGCAAATGCACCCCATGTTCCTGTTCACTTGGGGGCT
ATGTCGAGCACCGTTCGATGGCAGCTGAAGTACTGGGGTGATAAACTAAATGAGGGAGAT
GTTTTAGTCACCAATCATCCTTCTGCTGGTGGTAGCCACTTGCCTGATATAACTGTTATT
ACACCTGTTTTTAACAAAGGTAGATTGATATTCTTTGTCGCAAGTAGAGGGCATCATGCA
GAGATTGGAGGTATTACTCCTGGAAGTATGCCACCTTTCTCAAAGTTCATATGGGAGGAA
GGAGCAGCAATAAAAACATTCAAGCTTGTTGAGAAGGGCATTTTTCAGGAAGAAGGAATC
ACCAAGCTTCTTTGTTACCCCTGTTCTGAAGAATCAACTCATAAGATTCCAGGGTCGCGC
AGGCTTCAGGATAATTTATCTGACCTTCACGCACAAGTAGCTGCAAATCAGAGAGGAATT
ACCCTTATTAATGAGCTTATTGAGCAATACGGTCTGGAAACTGTACAGGCATACATGAAC
CATGTACAGGCTAATGCTGAAGAAGCAGTGAGAGAAATGCTTAAATCTGTTGCTGGGAGA
GTTTCCTCCGAATCAAAAAGGTCTGCAGAGGGAGACTTAGTGACTATCGAAGAGGAAGAT
TACATGGATGATGGGTCTTCCATACACTTAAAGCTTACGATAGATTCTCGGAAGGGTGAA
GCATTTTTTGATTTCTCTGGGACCAGCACAGAGGTTTATGGTAATTGGAATGCTCCAGAA
GCAGTGACAGCTGCTGCAGTTATTTACTGTGTACGCTGTTTGGTGAATGTTGATATTCCT
CTCAATCAAGGTTGCTTGGCTCCTGTAAAGATTTATATACCTCCTGGTTCATTTCTCTCT
CCAAGTGACAAGGCTGCTGTGGTGGGTGGTAACGTTCTTACGTCACAAAGGGTCACCGAT
GTCGTTCTCACTGCATTCCAAGCTTGTGCTTGTTCCCAGGGTTGCATGAATAATCTAACC
TTTGGTGATGACACTTTTGGTTACTATGAAACAATCGGAGGTGGAAGTGGGGCTGGACCT
ACATGGGATGGGACGAGTGCAGTCCAGTGCCATATGACCAACACTCGCATGACAGATCCA
GAGATCTTTGAGCAAAGATACCCAGTTATATTGCATAAGTTTGGAATAAGAGAGAATAGT
GGTGGTGCTGGTCAACATAAAGGAGGTGATGGCATTATCAGGGAGATAGAATTCAAACGT
CCAGTCATCGTCAGTATCCTTTCAGAAAGACGTGTGCATGCCCCAAGGGGACTCATGGGT
GGAGCAGATGGGGCTCGGGGTGCTAATTTCCTCATCACCAAAGATAAAAGGAAGGTATAT
GTTGGTGGTAAAAACACAATTGAGGTGCAGGCTGGCGAAATACTTCAGATTCTTACTCCA
GGAGGTGGTGGCTGGGGTTCAATATGA