Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022797
CDS Infomation

pacid=37457271 polypeptide=PGSC0003DMP400015524 locus=PGSC0003DMG400008844 ID=PGSC0003DMT400022797.v4.03 annot-version=v4.03
Sequence

ATGGAGAATCATCATCCTTCGACTCGTTTGTCCATGGATTCGAGTGCATCTTCTTCACAT
GATGAATTAGACCTCGAGATGAGTAGACAAGTAGTCATAACTTGTCCACCTGATATTAAT
TTGCCTTTATCAGCTGAGCGTAGCCCTCCTCCGCAGCCATGGAACTCGGAACATTGTGAT
ATTCTTGATGTCGGGCTTGGGACACAGGTTTATGAGCCTGAAAGTTCTATTAGTGCATCT
AAAGTTGGAAGGAAATGTGCGAAACGTTTGGATAGTATTTGGGGTGCTTGGGTTTTCTTT
AGCTTTTATTTTAGGCCTGTGTTAAATGAGAAATCGAAGGCAAAGATGGTAAGGGATAGT
AATGGATATTCCGGGTTTGATAAATCTGATCTCCAGCTTGATTTGTTCATGGTTCAGCAT
GACATGGAGAACCTGTATATGTGGATTTTCAAGGAAAGGCCTGAGAATGCACTTGGTAAG
ATGCAGCTCCGGAGTTACATGAATGGGCATTCTCGTCAAGGGGAGCGTCCGTTTCCCTTT
AGTGTTGACAAAGGTTTCGTTCGATCTCATAGAATGCAGAGGAAGCACTACAGGGGGCTG
TCGAATCCTCAGTGTATTCATGGTATTGAGGTTGTTTCATCTCCCAGTCTTATGGTTCTT
GATGAAGAGGAGCGCAAAAGATGGATGGAACTCACAGGTAGGGAACTCAACTTCAGTATT
CCACACGAAGCAAGCGATTACAGTTCATGGAGAAACCTCCCCAACACTGAATTTGAGCTT
GAGAGACCACTCCCACCAATTAAGAGTAATCCGCATTCCAATCCAAAGAAACTGGCTAAT
GGATCAGGGCTTAATTTGTTAACTCAGCCATCCAATCACAACAACGGGGATGCAATGGAT
CTACTACCTGCGAATGGCAAAAGGAAAAAGGATTTCTTCCCTCACGGTAACGAAGATGAG
TGTTACCTGCAAGTAAATCCTCCTTCCTATCAAACTCCGGATCTTGAAATTAACCCAACT
GAACCACATTGGTTACATGACTTTAGTGGGGTGATGAGGGATGTCTATGGGCCTGTAACA
GCTGCAAAAAGCATATATGAAGATGAACAAGGTTACTTAATCGTACTCAGTTTGCCATTT
GTAGATCTTCAAAGGGTGAAAGTTTCCTGGCGAAACACGCTCACACATGGTATAATAAAG
GTGTCTTGTTTAAGCACATCTCGCATGCCATTCATCAACAGACAAAACAGAACTTTCAAG
CTTGACGAGTCATCCTCAGAACACTGCCCTCCAGGTGAATTTGTCAGAGAAATTCCCCTG
TCAACAAGAATCCCAGAAGATGCCAAAATTGAAGCGTACTACGACGAATCAGGAACTGTG
CTCGAGATGTTGGTACCAAAACTTTGCGAAGGACCTGAAGAACATGAAGTTCGTGTTTGC
CTCCGTCCTCACCTTGGGGGAAATGACCTCATGTTGACCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400015524
PEP Infomation

pacid=37457271 transcript=PGSC0003DMT400022797 locus=PGSC0003DMG400008844 ID=PGSC0003DMT400022797.v4.03 annot-version=v4.03
Sequence

MENHHPSTRLSMDSSASSSHDELDLEMSRQVVITCPPDINLPLSAERSPPPQPWNSEHCD
ILDVGLGTQVYEPESSISASKVGRKCAKRLDSIWGAWVFFSFYFRPVLNEKSKAKMVRDS
NGYSGFDKSDLQLDLFMVQHDMENLYMWIFKERPENALGKMQLRSYMNGHSRQGERPFPF
SVDKGFVRSHRMQRKHYRGLSNPQCIHGIEVVSSPSLMVLDEEERKRWMELTGRELNFSI
PHEASDYSSWRNLPNTEFELERPLPPIKSNPHSNPKKLANGSGLNLLTQPSNHNNGDAMD
LLPANGKRKKDFFPHGNEDECYLQVNPPSYQTPDLEINPTEPHWLHDFSGVMRDVYGPVT
AAKSIYEDEQGYLIVLSLPFVDLQRVKVSWRNTLTHGIIKVSCLSTSRMPFINRQNRTFK
LDESSSEHCPPGEFVREIPLSTRIPEDAKIEAYYDESGTVLEMLVPKLCEGPEEHEVRVC
LRPHLGGNDLMLT*

Transcript Sequence

Transcript ID

PGSC0003DMT400022797
Transcript Infomation

pacid=37457271 locus=PGSC0003DMG400008844 ID=PGSC0003DMT400022797.v4.03 annot-version=v4.03
Sequence

ATGGAGAATCATCATCCTTCGACTCGTTTGTCCATGGATTCGAGTGCATCTTCTTCACAT
GATGAATTAGACCTCGAGATGAGTAGACAAGTAGTCATAACTTGTCCACCTGATATTAAT
TTGCCTTTATCAGCTGAGCGTAGCCCTCCTCCGCAGCCATGGAACTCGGAACATTGTGAT
ATTCTTGATGTCGGGCTTGGGACACAGGTTTATGAGCCTGAAAGTTCTATTAGTGCATCT
AAAGTTGGAAGGAAATGTGCGAAACGTTTGGATAGTATTTGGGGTGCTTGGGTTTTCTTT
AGCTTTTATTTTAGGCCTGTGTTAAATGAGAAATCGAAGGCAAAGATGGTAAGGGATAGT
AATGGATATTCCGGGTTTGATAAATCTGATCTCCAGCTTGATTTGTTCATGGTTCAGCAT
GACATGGAGAACCTGTATATGTGGATTTTCAAGGAAAGGCCTGAGAATGCACTTGGTAAG
ATGCAGCTCCGGAGTTACATGAATGGGCATTCTCGTCAAGGGGAGCGTCCGTTTCCCTTT
AGTGTTGACAAAGGTTTCGTTCGATCTCATAGAATGCAGAGGAAGCACTACAGGGGGCTG
TCGAATCCTCAGTGTATTCATGGTATTGAGGTTGTTTCATCTCCCAGTCTTATGGTTCTT
GATGAAGAGGAGCGCAAAAGATGGATGGAACTCACAGGTAGGGAACTCAACTTCAGTATT
CCACACGAAGCAAGCGATTACAGTTCATGGAGAAACCTCCCCAACACTGAATTTGAGCTT
GAGAGACCACTCCCACCAATTAAGAGTAATCCGCATTCCAATCCAAAGAAACTGGCTAAT
GGATCAGGGCTTAATTTGTTAACTCAGCCATCCAATCACAACAACGGGGATGCAATGGAT
CTACTACCTGCGAATGGCAAAAGGAAAAAGGATTTCTTCCCTCACGGTAACGAAGATGAG
TGTTACCTGCAAGTAAATCCTCCTTCCTATCAAACTCCGGATCTTGAAATTAACCCAACT
GAACCACATTGGTTACATGACTTTAGTGGGGTGATGAGGGATGTCTATGGGCCTGTAACA
GCTGCAAAAAGCATATATGAAGATGAACAAGGTTACTTAATCGTACTCAGTTTGCCATTT
GTAGATCTTCAAAGGGTGAAAGTTTCCTGGCGAAACACGCTCACACATGGTATAATAAAG
GTGTCTTGTTTAAGCACATCTCGCATGCCATTCATCAACAGACAAAACAGAACTTTCAAG
CTTGACGAGTCATCCTCAGAACACTGCCCTCCAGGTGAATTTGTCAGAGAAATTCCCCTG
TCAACAAGAATCCCAGAAGATGCCAAAATTGAAGCGTACTACGACGAATCAGGAACTGTG
CTCGAGATGTTGGTACCAAAACTTTGCGAAGGACCTGAAGAACATGAAGTTCGTGTTTGC
CTCCGTCCTCACCTTGGGGGAAATGACCTCATGTTGACCTAA