Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022750
CDS Infomation

pacid=37455386 polypeptide=PGSC0003DMP400015497 locus=PGSC0003DMG400008825 ID=PGSC0003DMT400022750.v4.03 annot-version=v4.03
Sequence

ATGTTTCGAATCGGAGCTAAGCTCTTTAGAGCTGCCAGAATTGGTGGCTCCGCCGTGTCC
GATTTCAGGTTACCACCAACAAGATTTTTCTCCATTAACAACAATGTTAATACTGGTTTC
AAGACCAACCCAGTTGCTCTTCAAATGATCAATTATGCTATTTCCCTTGCTCGGGCACAA
AAATCAGATGAATCATATGCGCAAGCTCAATTGGTACTTGAGCAGTGCCACTCAACTCAG
TCGGATGAGAGTGCTAAAGGATTGGTTTTGCTCGCTATGTCTACCTTATTTTCTGAAAGA
GGGAATTTTGGTGAAGCCATTGAGAAGCTCCAGAAAATTCAAGATTTGGGCTTGTCATCT
TTAGCTGTTAGAGTTGCCGCCTCTGAAGCACTTGCTGGGCTTTATTTAGAATCATATCAA
GATGATTTTTCATCAGCAACTGCAGATATGTGCTTGCAACTGCTGGAAACCATAAGGCTA
GAGATTGGTGGTGGTGGATCTGACATTTTGGAAGCTCGTGCAAAAGCATTGAAAGGGCTG
GTTGAGTTGGTCCATGGTAATGTTGAATCAGCCCAGTCATTCTTTGAAGGATCTCAAGGT
GATAAAGGTTGCTTTGGCAACGTTGCACTATCTTTTGGTGAATTCCTGCATTGTAAGCGG
AATTTCCAAATGGCGAGGGAGTTATATCAAAGGGCAATGCAGGATGTATCAGAACGTAAA
GATTTTACTGACTCACAGTCCGTATCAGCTTGTAACATGAATTTGGAGGAGACTTTGTTA
GGAGCTACTTGTGCTCTAGGACAGCTTGAGGCTCATTTGGGGAATTTTGATGATGCTGAG
GAAATACTAACTGCAGCACTGAAGAAAGCAGAAGAGTGCTTTGGTAATTATCATCCAAAG
GTAGGTATTATTTTGACCTGCATAGCTCTCATGTATCGACATAAAGCAGCCATGGAGCGG
TCAAGCTCGCTTTTGATTCAAGAGGGACTCTATAGAAGAGCAATTGAAGTGCTCAAAGCT
CCACCCTTGGAAGTAGAAGGTGTTGGAGCGACACGGTCTAGAAGGGATATTCTTGCCCTT
GCAAGAGGTGGGTATGCAGAGACGCTTATCGTGCAACAAAACAGAAAAGCAGAAGGTGAA
AAAATGAAGCAGTGGGCTGAAACAGCTTGGACAAATCGCAGATTGTCACTCGCGGAGGCA
CTAGAGTCATCCGAGTCATCAACCAAAGTGTCTGTCATAGATACTCGAATAAGCCGAGTC
CTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400015497
PEP Infomation

pacid=37455386 transcript=PGSC0003DMT400022750 locus=PGSC0003DMG400008825 ID=PGSC0003DMT400022750.v4.03 annot-version=v4.03
Sequence

MFRIGAKLFRAARIGGSAVSDFRLPPTRFFSINNNVNTGFKTNPVALQMINYAISLARAQ
KSDESYAQAQLVLEQCHSTQSDESAKGLVLLAMSTLFSERGNFGEAIEKLQKIQDLGLSS
LAVRVAASEALAGLYLESYQDDFSSATADMCLQLLETIRLEIGGGGSDILEARAKALKGL
VELVHGNVESAQSFFEGSQGDKGCFGNVALSFGEFLHCKRNFQMARELYQRAMQDVSERK
DFTDSQSVSACNMNLEETLLGATCALGQLEAHLGNFDDAEEILTAALKKAEECFGNYHPK
VGIILTCIALMYRHKAAMERSSSLLIQEGLYRRAIEVLKAPPLEVEGVGATRSRRDILAL
ARGGYAETLIVQQNRKAEGEKMKQWAETAWTNRRLSLAEALESSESSTKVSVIDTRISRV
L*

Transcript Sequence

Transcript ID

PGSC0003DMT400022750
Transcript Infomation

pacid=37455386 locus=PGSC0003DMG400008825 ID=PGSC0003DMT400022750.v4.03 annot-version=v4.03
Sequence

ATGTTTCGAATCGGAGCTAAGCTCTTTAGAGCTGCCAGAATTGGTGGCTCCGCCGTGTCC
GATTTCAGGTTACCACCAACAAGATTTTTCTCCATTAACAACAATGTTAATACTGGTTTC
AAGACCAACCCAGTTGCTCTTCAAATGATCAATTATGCTATTTCCCTTGCTCGGGCACAA
AAATCAGATGAATCATATGCGCAAGCTCAATTGGTACTTGAGCAGTGCCACTCAACTCAG
TCGGATGAGAGTGCTAAAGGATTGGTTTTGCTCGCTATGTCTACCTTATTTTCTGAAAGA
GGGAATTTTGGTGAAGCCATTGAGAAGCTCCAGAAAATTCAAGATTTGGGCTTGTCATCT
TTAGCTGTTAGAGTTGCCGCCTCTGAAGCACTTGCTGGGCTTTATTTAGAATCATATCAA
GATGATTTTTCATCAGCAACTGCAGATATGTGCTTGCAACTGCTGGAAACCATAAGGCTA
GAGATTGGTGGTGGTGGATCTGACATTTTGGAAGCTCGTGCAAAAGCATTGAAAGGGCTG
GTTGAGTTGGTCCATGGTAATGTTGAATCAGCCCAGTCATTCTTTGAAGGATCTCAAGGT
GATAAAGGTTGCTTTGGCAACGTTGCACTATCTTTTGGTGAATTCCTGCATTGTAAGCGG
AATTTCCAAATGGCGAGGGAGTTATATCAAAGGGCAATGCAGGATGTATCAGAACGTAAA
GATTTTACTGACTCACAGTCCGTATCAGCTTGTAACATGAATTTGGAGGAGACTTTGTTA
GGAGCTACTTGTGCTCTAGGACAGCTTGAGGCTCATTTGGGGAATTTTGATGATGCTGAG
GAAATACTAACTGCAGCACTGAAGAAAGCAGAAGAGTGCTTTGGTAATTATCATCCAAAG
GTAGGTATTATTTTGACCTGCATAGCTCTCATGTATCGACATAAAGCAGCCATGGAGCGG
TCAAGCTCGCTTTTGATTCAAGAGGGACTCTATAGAAGAGCAATTGAAGTGCTCAAAGCT
CCACCCTTGGAAGTAGAAGGTGTTGGAGCGACACGGTCTAGAAGGGATATTCTTGCCCTT
GCAAGAGGTGGGTATGCAGAGACGCTTATCGTGCAACAAAACAGAAAAGCAGAAGGTGAA
AAAATGAAGCAGTGGGCTGAAACAGCTTGGACAAATCGCAGATTGTCACTCGCGGAGGCA
CTAGAGTCATCCGAGTCATCAACCAAAGTGTCTGTCATAGATACTCGAATAAGCCGAGTC
CTGTAG