Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022545
CDS Infomation

pacid=37445678 polypeptide=PGSC0003DMP400015372 locus=PGSC0003DMG400008739 ID=PGSC0003DMT400022545.v4.03 annot-version=v4.03
Sequence

ATGGCTTCGCCGGAAAACGACATTTACCGGCCATTTCTACAAAACAATGTAACATCATTA
TCACCACAATTATCCGAAACTCACAATTTCGAATCAAGCAACGAGCTCGAAACTGTGCTA
TTGGACACTGAAATACCTCTCTGGAGTAAACTCCGATTAGCGACATGGATCGAAATGAAG
TTCCTCTTCTTCCTTGCTGCTCCAGCGGTTATGGTTTACATGATTAATTACATCATGTCT
ATGTCTACTCAGATATTCTCCGGTCACTTGGGTAATCTTGAGCTTGCTGCTGCTTCACTT
GGAAATACTGGGATTCAAGTCTTTGCTTATGGTCTTATGTTGGGCATGGGAAGTGCAGTG
GAAACACTATGTGGTCAAGCATTTGGGGCAAAGAAATACGATATGCTTGGAGTTTATCTT
CAAAGATCGACAGTTCTGTTAACTCTAACAGGAATTTTACTCACCATAATGTACATTTTC
TGCAAGCCGATTCTAATATTTCTAGGCCAAACTGAGAGAATTGCAGCAGCAGCAGCGTTA
TTTGTGTACGGTTTAATCCCTCAGATATTTGCCTACGCCATTAATTTTCCGATTCAGAAA
TTCCTTCAAGCTCAGAGCATTGTAGCCCCGAGTGCCTACATCTCCGCTGCAACGTTAGTG
TTGCATTTGGGGTTGAGCTGGGTGGTGATTTTTAAGATCGGGCTCGGATTACTTGGGGCG
TCATTAGTGTTGAGTTTGTCATGGTGGATAATTGTTATAGGCCAATTTGTGTACATTGTG
AAGAGTGACAAGTGTAAACAGACATGGAAAGGGTTCAGTTGGATGGCGTTTACCGGCTTG
CCGGAGTTCTTCAAGCTATCGGCGGCCTCGGCAGTGATGCTGTGCTTGGAGACTTGGTAC
TTTCAGATTGTGGTGTTGCTTGCTGGCTTGCTTGAAAATCCTGAAGTGGCTTTGGATGCT
CTTTCTATTTGCATGTCAATTTCTGGTTGGGTCTTCATGATATCAGTTGGATTCAATGCA
GCAGCAAGTGTGAGAGTGAGCAATGAACTAGGAGCAAGGCATCCCAAATCAGCAGCTTTT
TCTGTTGTCGTGGTTACATCGTGGTCTTTCATTCTCTCAATGATTGCTGCAGTCATCGTT
CTTGCATTGCGTAATCTCATCAGTTATGCCTTCACTGAAGGTGAAGTCGTGGCTGAAGCT
GTCTCGGATCTTTGTCCATTGCTTGCGCTTTCCCTCATCCTCAACGGAATTCAGCCCGTC
TTGTCAGGTGTGGCCGTTGGCTGTGGATGGCAAGCCTTCGTGGCCTATGTCAATATAGGC
TGCTATTACATTGTCGGAGTTCCATTGGGTGTTCTTCTCGGCTTTTACTTCAAACTTGGC
GCTAAGGGAATATGGTCAGGAATGCTGGGAGGTACAGTGATGCAAACAATCATTTTAATA
TGGATCACCGCTCGAACTGATTGGAATAAAGAGGTGGAATCAGCTCAGAGTAGGTTGAAA
ATGTGGGATGACAAGAAAGAATCAATTCTAGAGGAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400015372
PEP Infomation

pacid=37445678 transcript=PGSC0003DMT400022545 locus=PGSC0003DMG400008739 ID=PGSC0003DMT400022545.v4.03 annot-version=v4.03
Sequence

MASPENDIYRPFLQNNVTSLSPQLSETHNFESSNELETVLLDTEIPLWSKLRLATWIEMK
FLFFLAAPAVMVYMINYIMSMSTQIFSGHLGNLELAAASLGNTGIQVFAYGLMLGMGSAV
ETLCGQAFGAKKYDMLGVYLQRSTVLLTLTGILLTIMYIFCKPILIFLGQTERIAAAAAL
FVYGLIPQIFAYAINFPIQKFLQAQSIVAPSAYISAATLVLHLGLSWVVIFKIGLGLLGA
SLVLSLSWWIIVIGQFVYIVKSDKCKQTWKGFSWMAFTGLPEFFKLSAASAVMLCLETWY
FQIVVLLAGLLENPEVALDALSICMSISGWVFMISVGFNAAASVRVSNELGARHPKSAAF
SVVVVTSWSFILSMIAAVIVLALRNLISYAFTEGEVVAEAVSDLCPLLALSLILNGIQPV
LSGVAVGCGWQAFVAYVNIGCYYIVGVPLGVLLGFYFKLGAKGIWSGMLGGTVMQTIILI
WITARTDWNKEVESAQSRLKMWDDKKESILEE*

Transcript Sequence

Transcript ID

PGSC0003DMT400022545
Transcript Infomation

pacid=37445678 locus=PGSC0003DMG400008739 ID=PGSC0003DMT400022545.v4.03 annot-version=v4.03
Sequence

ATGGCTTCGCCGGAAAACGACATTTACCGGCCATTTCTACAAAACAATGTAACATCATTA
TCACCACAATTATCCGAAACTCACAATTTCGAATCAAGCAACGAGCTCGAAACTGTGCTA
TTGGACACTGAAATACCTCTCTGGAGTAAACTCCGATTAGCGACATGGATCGAAATGAAG
TTCCTCTTCTTCCTTGCTGCTCCAGCGGTTATGGTTTACATGATTAATTACATCATGTCT
ATGTCTACTCAGATATTCTCCGGTCACTTGGGTAATCTTGAGCTTGCTGCTGCTTCACTT
GGAAATACTGGGATTCAAGTCTTTGCTTATGGTCTTATGTTGGGCATGGGAAGTGCAGTG
GAAACACTATGTGGTCAAGCATTTGGGGCAAAGAAATACGATATGCTTGGAGTTTATCTT
CAAAGATCGACAGTTCTGTTAACTCTAACAGGAATTTTACTCACCATAATGTACATTTTC
TGCAAGCCGATTCTAATATTTCTAGGCCAAACTGAGAGAATTGCAGCAGCAGCAGCGTTA
TTTGTGTACGGTTTAATCCCTCAGATATTTGCCTACGCCATTAATTTTCCGATTCAGAAA
TTCCTTCAAGCTCAGAGCATTGTAGCCCCGAGTGCCTACATCTCCGCTGCAACGTTAGTG
TTGCATTTGGGGTTGAGCTGGGTGGTGATTTTTAAGATCGGGCTCGGATTACTTGGGGCG
TCATTAGTGTTGAGTTTGTCATGGTGGATAATTGTTATAGGCCAATTTGTGTACATTGTG
AAGAGTGACAAGTGTAAACAGACATGGAAAGGGTTCAGTTGGATGGCGTTTACCGGCTTG
CCGGAGTTCTTCAAGCTATCGGCGGCCTCGGCAGTGATGCTGTGCTTGGAGACTTGGTAC
TTTCAGATTGTGGTGTTGCTTGCTGGCTTGCTTGAAAATCCTGAAGTGGCTTTGGATGCT
CTTTCTATTTGCATGTCAATTTCTGGTTGGGTCTTCATGATATCAGTTGGATTCAATGCA
GCAGCAAGTGTGAGAGTGAGCAATGAACTAGGAGCAAGGCATCCCAAATCAGCAGCTTTT
TCTGTTGTCGTGGTTACATCGTGGTCTTTCATTCTCTCAATGATTGCTGCAGTCATCGTT
CTTGCATTGCGTAATCTCATCAGTTATGCCTTCACTGAAGGTGAAGTCGTGGCTGAAGCT
GTCTCGGATCTTTGTCCATTGCTTGCGCTTTCCCTCATCCTCAACGGAATTCAGCCCGTC
TTGTCAGGTGTGGCCGTTGGCTGTGGATGGCAAGCCTTCGTGGCCTATGTCAATATAGGC
TGCTATTACATTGTCGGAGTTCCATTGGGTGTTCTTCTCGGCTTTTACTTCAAACTTGGC
GCTAAGGGAATATGGTCAGGAATGCTGGGAGGTACAGTGATGCAAACAATCATTTTAATA
TGGATCACCGCTCGAACTGATTGGAATAAAGAGGTGGAATCAGCTCAGAGTAGGTTGAAA
ATGTGGGATGACAAGAAAGAATCAATTCTAGAGGAATAG