Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022486
CDS Infomation

pacid=37459335 polypeptide=PGSC0003DMP400015322 locus=PGSC0003DMG400008716 ID=PGSC0003DMT400022486.v4.03 annot-version=v4.03
Sequence

ATGGAAAATACCTTGAGTGCACGAACTACTAAAGCTTCAAACAGTTCCATGGATGTGGCT
GTCGATGTAACTGGGTTTGCAAGAAGCAGCGACATCAGATTAGCTACGAAGGCAGATCCC
GATGAAACTGAATACTCAAGCTCATTTGTTGATTCTATATCAGAAAATGATAATGGTTCT
AGTGACGCTGAAGTGGAGTCACGGTTCTATGATGATAGTGGTTTGTCATCTTCGTTTGAT
GGGTTTAGCAGCTTGTTTCCAATAAGGAAGAAAAAGTTGACTTCTCACTGGAGAGACTTT
ATACGTCCCATAATGTGGCGGTGTAAATGGGCAGAACTCAAGATGAAAGAGCTTCAGTTG
CAGGAGGCAAAGTACAATAGGGAGATATCAGAACATAATAGGAAAAGACATAGGGAGTTC
GATCAAGCTTCTTTGGATGAGTCAGGCTCGAAATCGTTGCCATTTATTCATCCAAGGCAC
AGGAAAAAGGCCATGAAGAGGAGAAAGAGGAAGAGAGTTGAGCACGGAACAGATATTGCA
ACACACATGTCTACTCATAACCTTTTCTCTTATTTTGAAAATAAAAGGCTAGATTTGGAT
GCGACACCACCTGGAGATGATATTAGTAATGCAGCATTGGCAGAACAGAAAACCAATGGT
CAGGATGAGTTTGGAATTGATGATGATTTGTCAATTCTTGTAAGCAGCAACGGTTATCTT
GAGCAGATCCTTCGGAAAATTGAATTAGTACATAGTCGGGTTCATAAGCTGAAAGACCAG
CTTGATACAGTGATGACGAAAAATGCGATAAAGTTTTCTTCCTCTGAGAATTTAATGTCA
TTTGATGGACAGGCTAGCTCTATTCCTAGTCCTACATTCTCAGCATGCAATGGAGACACA
ACATCAGCTGGAGGTTTATATGCTACATCTCAGCATGTGGTAGATTATGATCTCGGAGAT
TTCATCATGCCTGACAGTGCAATGTCAAGCTATGGAGAGGCTATGCGTATTCCTGACATA
ATAGAAAGTACAGTAGGACTTTTGTCCTCTGTGGATGTCACGCAGCAGCAGGCGCAAGTT
GGAGATTCAAGTGAAAGAATTGTTGATAACATTCTCATACATAATGAAGTATCTGAAGTA
GGACACATTTTGGCGATTAATCATGATATATCCTTTGACAAGCATCAAGATGTGGGAAAT
AACGTGGAAGAAGAAAGCTTTAATCCAGCTCCCCCTGCATCAGAAGCTAATGCAGCAGGT
AAAGCATCCACATCTCAGGATCAATCAACATTGAAATCGTGCTTAGCCTCGGAGATCCAT
TTTCCCAAAAACAAAAGAAAGAGAGGAGAGCGTAAAGCCGGTTCGGGTGGTTGGAATCGT
AGGATGCCAGGTGAACCTGATAGCCAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400015322
PEP Infomation

pacid=37459335 transcript=PGSC0003DMT400022486 locus=PGSC0003DMG400008716 ID=PGSC0003DMT400022486.v4.03 annot-version=v4.03
Sequence

MENTLSARTTKASNSSMDVAVDVTGFARSSDIRLATKADPDETEYSSSFVDSISENDNGS
SDAEVESRFYDDSGLSSSFDGFSSLFPIRKKKLTSHWRDFIRPIMWRCKWAELKMKELQL
QEAKYNREISEHNRKRHREFDQASLDESGSKSLPFIHPRHRKKAMKRRKRKRVEHGTDIA
THMSTHNLFSYFENKRLDLDATPPGDDISNAALAEQKTNGQDEFGIDDDLSILVSSNGYL
EQILRKIELVHSRVHKLKDQLDTVMTKNAIKFSSSENLMSFDGQASSIPSPTFSACNGDT
TSAGGLYATSQHVVDYDLGDFIMPDSAMSSYGEAMRIPDIIESTVGLLSSVDVTQQQAQV
GDSSERIVDNILIHNEVSEVGHILAINHDISFDKHQDVGNNVEEESFNPAPPASEANAAG
KASTSQDQSTLKSCLASEIHFPKNKRKRGERKAGSGGWNRRMPGEPDSQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400022486
Transcript Infomation

pacid=37459335 locus=PGSC0003DMG400008716 ID=PGSC0003DMT400022486.v4.03 annot-version=v4.03
Sequence

ATGGAAAATACCTTGAGTGCACGAACTACTAAAGCTTCAAACAGTTCCATGGATGTGGCT
GTCGATGTAACTGGGTTTGCAAGAAGCAGCGACATCAGATTAGCTACGAAGGCAGATCCC
GATGAAACTGAATACTCAAGCTCATTTGTTGATTCTATATCAGAAAATGATAATGGTTCT
AGTGACGCTGAAGTGGAGTCACGGTTCTATGATGATAGTGGTTTGTCATCTTCGTTTGAT
GGGTTTAGCAGCTTGTTTCCAATAAGGAAGAAAAAGTTGACTTCTCACTGGAGAGACTTT
ATACGTCCCATAATGTGGCGGTGTAAATGGGCAGAACTCAAGATGAAAGAGCTTCAGTTG
CAGGAGGCAAAGTACAATAGGGAGATATCAGAACATAATAGGAAAAGACATAGGGAGTTC
GATCAAGCTTCTTTGGATGAGTCAGGCTCGAAATCGTTGCCATTTATTCATCCAAGGCAC
AGGAAAAAGGCCATGAAGAGGAGAAAGAGGAAGAGAGTTGAGCACGGAACAGATATTGCA
ACACACATGTCTACTCATAACCTTTTCTCTTATTTTGAAAATAAAAGGCTAGATTTGGAT
GCGACACCACCTGGAGATGATATTAGTAATGCAGCATTGGCAGAACAGAAAACCAATGGT
CAGGATGAGTTTGGAATTGATGATGATTTGTCAATTCTTGTAAGCAGCAACGGTTATCTT
GAGCAGATCCTTCGGAAAATTGAATTAGTACATAGTCGGGTTCATAAGCTGAAAGACCAG
CTTGATACAGTGATGACGAAAAATGCGATAAAGTTTTCTTCCTCTGAGAATTTAATGTCA
TTTGATGGACAGGCTAGCTCTATTCCTAGTCCTACATTCTCAGCATGCAATGGAGACACA
ACATCAGCTGGAGGTTTATATGCTACATCTCAGCATGTGGTAGATTATGATCTCGGAGAT
TTCATCATGCCTGACAGTGCAATGTCAAGCTATGGAGAGGCTATGCGTATTCCTGACATA
ATAGAAAGTACAGTAGGACTTTTGTCCTCTGTGGATGTCACGCAGCAGCAGGCGCAAGTT
GGAGATTCAAGTGAAAGAATTGTTGATAACATTCTCATACATAATGAAGTATCTGAAGTA
GGACACATTTTGGCGATTAATCATGATATATCCTTTGACAAGCATCAAGATGTGGGAAAT
AACGTGGAAGAAGAAAGCTTTAATCCAGCTCCCCCTGCATCAGAAGCTAATGCAGCAGGT
AAAGCATCCACATCTCAGGATCAATCAACATTGAAATCGTGCTTAGCCTCGGAGATCCAT
TTTCCCAAAAACAAAAGAAAGAGAGGAGAGCGTAAAGCCGGTTCGGGTGGTTGGAATCGT
AGGATGCCAGGTGAACCTGATAGCCAGTGA