Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022477
CDS Infomation

pacid=37436420 polypeptide=PGSC0003DMP400015316 locus=PGSC0003DMG400008712 ID=PGSC0003DMT400022477.v4.03 annot-version=v4.03
Sequence

ATGATGATGTTTGAAGACATTGGGTTTTGTGGTGATCTTGATTTCTTCCCTGCTCCGCTG
AAGGAGGCGGAAACAGTAGCTGCTGTTCCACTGATTGAGCCGGAGCCGATGATGGATGAT
GACGATAGTGATGAAGAGATCGATGTGGATGAGCTGGAGAAGAGGATGTGGAGGGACAAG
ATGAAGCTGAAAAGGCTGAAAGAAATGAGTAAGGGTAAGGAAGGTGTTGATGCTGTCAAA
CAACGCCAGTCTCAGGAGCAAGCTAGGAGGAAGAAGATGTCCAGGGCACAAGATGGGATC
TTGAAGTATATGTTGAAGATGATGGAAGTATGTAAAGCTCAGGGTTTTGTTTATGGAATT
ATCCCGGAGAAAGGCAAACCAGTGACTGGGGCATCGGATAATCTCAGGGAGTGGTGGAAG
GATAAAGTGAGGTTTGATCGCAACGGACCCGCTGCCATAGCAAAGTACCAAGCTGACAAT
GCCATCCCTGGCAAGAATGAGGGTTCTAATCCGATTGGTCCTACTCCTCACACTCTGCAG
GAGCTTCAAGATACCACCCTTGGCTCTTTACTGTCAGCTTTAATGCAACATTGTGATCCT
CCTCAGAGGCGATTTCCATTGGAAAAAGGTGTTTCACCTCCATGGTGGCCAAATGGACAG
GAGGATTGGTGGCCTCAATTGGGACTGCCAAATGATCAAGGTCCTCCACCTTATAAGAAG
CCTCATGATCTGAAGAAGGCTTGGAAGGTTGGTGTCCTCACAGCGGTGATCAAGCACATC
TCCCCTGATATTGCTAAGATTCGCAAGCTGGTAAGGCAATCGAAGTGCTTGCAGGACAAG
ATGACAGCGAAGGAAAGTGCAACTTGGCTTGCCATCATCAATCAGGAGGAAGTTTTGGCT
CGTGAACTTTATCCTGATCGCTGTCCACCTTTGTCCTCAGGTGGTGGTAGTGGAACCTTC
ACTATGAATGACAGCAGTGAGTATGATGTTGAAGGTGCTATTGATGACCCTATCTTTGAC
ATTCAAGAGCAAAAGCCAAACCATCTCAGTTTGCTGAATGTCAGTGTTGAGATGTTCAAG
GAGAAGCTGCCTCTGCTACAACAGTCTCAGCCAATGAAGGGTGACATTTTTGCCAACTTA
GATTTCACTCGCAAGAGGAAGCCGGCTGATGACTTGACTTTTCTGATGGATCCGAAGATA
TATACTTGTGAGTGTCTTCAATGTCCTCATAGTGAGCTTCGCAATGGTTTTCCAGACAGA
TCCAGCAGAGACAATCATCAGTTAACTTGCCTTTTCAGAAATACCTCCCAATTTGGAGTT
CCAAACTTTCACGTGGAGGAAGTCAAGCCAGTTGTCTTCCCTCAACAGTATGCTCAGCCA
AAGCAGGCTTCGCTTCCGGTCAACCCAGCTCCACCCTCCTTTGATACATCTGGACTTGGG
GTTCCTGCAGATGGGCAGAGGGTGATCAATGAGCTTATGTCATTCTATGAAAGTAATGTT
CAAGGAAACAAAAGCTCAATGGCGGGGAATGTTGTGATGTCCAAAGAGCAGCCTCTTCAA
CAACCTAGCATTCAACAGAACAATTACCTACAAAGCCAAGGGAATGTGTTGGAGGGAAGC
ATCTTCGGGGACACCAACATTTCTGCTAACAACTCCATGTTTGTGCAGGGAGATCGGTTT
GATCAGAGCAAGGTTTTAACTTCACCATTCAATGCAGGCTCTAATGATGATTTCAATTTC
ATGTTTGGATCTCCATTCAATTTGCAATCCACAGATCTCTCTGAATGTCTTTCTGGGATT
TCACATGATGACATGACGAAGCAAGACACATCGGTTTGGTACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400015316
PEP Infomation

pacid=37436420 transcript=PGSC0003DMT400022477 locus=PGSC0003DMG400008712 ID=PGSC0003DMT400022477.v4.03 annot-version=v4.03
Sequence

MMMFEDIGFCGDLDFFPAPLKEAETVAAVPLIEPEPMMDDDDSDEEIDVDELEKRMWRDK
MKLKRLKEMSKGKEGVDAVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGI
IPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGKNEGSNPIGPTPHTLQ
ELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPNGQEDWWPQLGLPNDQGPPPYKK
PHDLKKAWKVGVLTAVIKHISPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEVLA
RELYPDRCPPLSSGGGSGTFTMNDSSEYDVEGAIDDPIFDIQEQKPNHLSLLNVSVEMFK
EKLPLLQQSQPMKGDIFANLDFTRKRKPADDLTFLMDPKIYTCECLQCPHSELRNGFPDR
SSRDNHQLTCLFRNTSQFGVPNFHVEEVKPVVFPQQYAQPKQASLPVNPAPPSFDTSGLG
VPADGQRVINELMSFYESNVQGNKSSMAGNVVMSKEQPLQQPSIQQNNYLQSQGNVLEGS
IFGDTNISANNSMFVQGDRFDQSKVLTSPFNAGSNDDFNFMFGSPFNLQSTDLSECLSGI
SHDDMTKQDTSVWY*

Transcript Sequence

Transcript ID

PGSC0003DMT400022477
Transcript Infomation

pacid=37436420 locus=PGSC0003DMG400008712 ID=PGSC0003DMT400022477.v4.03 annot-version=v4.03
Sequence

ATGATGATGTTTGAAGACATTGGGTTTTGTGGTGATCTTGATTTCTTCCCTGCTCCGCTG
AAGGAGGCGGAAACAGTAGCTGCTGTTCCACTGATTGAGCCGGAGCCGATGATGGATGAT
GACGATAGTGATGAAGAGATCGATGTGGATGAGCTGGAGAAGAGGATGTGGAGGGACAAG
ATGAAGCTGAAAAGGCTGAAAGAAATGAGTAAGGGTAAGGAAGGTGTTGATGCTGTCAAA
CAACGCCAGTCTCAGGAGCAAGCTAGGAGGAAGAAGATGTCCAGGGCACAAGATGGGATC
TTGAAGTATATGTTGAAGATGATGGAAGTATGTAAAGCTCAGGGTTTTGTTTATGGAATT
ATCCCGGAGAAAGGCAAACCAGTGACTGGGGCATCGGATAATCTCAGGGAGTGGTGGAAG
GATAAAGTGAGGTTTGATCGCAACGGACCCGCTGCCATAGCAAAGTACCAAGCTGACAAT
GCCATCCCTGGCAAGAATGAGGGTTCTAATCCGATTGGTCCTACTCCTCACACTCTGCAG
GAGCTTCAAGATACCACCCTTGGCTCTTTACTGTCAGCTTTAATGCAACATTGTGATCCT
CCTCAGAGGCGATTTCCATTGGAAAAAGGTGTTTCACCTCCATGGTGGCCAAATGGACAG
GAGGATTGGTGGCCTCAATTGGGACTGCCAAATGATCAAGGTCCTCCACCTTATAAGAAG
CCTCATGATCTGAAGAAGGCTTGGAAGGTTGGTGTCCTCACAGCGGTGATCAAGCACATC
TCCCCTGATATTGCTAAGATTCGCAAGCTGGTAAGGCAATCGAAGTGCTTGCAGGACAAG
ATGACAGCGAAGGAAAGTGCAACTTGGCTTGCCATCATCAATCAGGAGGAAGTTTTGGCT
CGTGAACTTTATCCTGATCGCTGTCCACCTTTGTCCTCAGGTGGTGGTAGTGGAACCTTC
ACTATGAATGACAGCAGTGAGTATGATGTTGAAGGTGCTATTGATGACCCTATCTTTGAC
ATTCAAGAGCAAAAGCCAAACCATCTCAGTTTGCTGAATGTCAGTGTTGAGATGTTCAAG
GAGAAGCTGCCTCTGCTACAACAGTCTCAGCCAATGAAGGGTGACATTTTTGCCAACTTA
GATTTCACTCGCAAGAGGAAGCCGGCTGATGACTTGACTTTTCTGATGGATCCGAAGATA
TATACTTGTGAGTGTCTTCAATGTCCTCATAGTGAGCTTCGCAATGGTTTTCCAGACAGA
TCCAGCAGAGACAATCATCAGTTAACTTGCCTTTTCAGAAATACCTCCCAATTTGGAGTT
CCAAACTTTCACGTGGAGGAAGTCAAGCCAGTTGTCTTCCCTCAACAGTATGCTCAGCCA
AAGCAGGCTTCGCTTCCGGTCAACCCAGCTCCACCCTCCTTTGATACATCTGGACTTGGG
GTTCCTGCAGATGGGCAGAGGGTGATCAATGAGCTTATGTCATTCTATGAAAGTAATGTT
CAAGGAAACAAAAGCTCAATGGCGGGGAATGTTGTGATGTCCAAAGAGCAGCCTCTTCAA
CAACCTAGCATTCAACAGAACAATTACCTACAAAGCCAAGGGAATGTGTTGGAGGGAAGC
ATCTTCGGGGACACCAACATTTCTGCTAACAACTCCATGTTTGTGCAGGGAGATCGGTTT
GATCAGAGCAAGGTTTTAACTTCACCATTCAATGCAGGCTCTAATGATGATTTCAATTTC
ATGTTTGGATCTCCATTCAATTTGCAATCCACAGATCTCTCTGAATGTCTTTCTGGGATT
TCACATGATGACATGACGAAGCAAGACACATCGGTTTGGTACTAG