Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022472
CDS Infomation

pacid=37436753 polypeptide=PGSC0003DMP400015312 locus=PGSC0003DMG400008710 ID=PGSC0003DMT400022472.v4.03 annot-version=v4.03
Sequence

ATGGAGGAAACACTGAAAAATGGGATCTTGGTTTTTGCTGTCAATGGAAAAAGATATGAG
CTTCCTAGTGTTGACCCTTCAACTACTTTGCTTCAGTTTTTGCGCACTGAAACTTGCTTC
AAAAGTCCCAAGTTAGGCTGTGGTGAAGGTGGTTGTGGTGCTTGTGTTGTTCTTCTCTCA
AAGTATGATCCCCAGCTTAAACGGGTTGAAGATTTTAGTGTGAGTTCATGCCTTACTCTT
CTTTGCAGTTTAAATGGTTGCGGAATTACTACAAGTGATGGCCTTGGAAACAACAAGGAT
GGTTTCCACTCAATTCATGAAAGGTTTGCAGGTTTTCATGCTTCTCAATGTGGATATTGC
ACTCCAGGAATGTGTATGTCCTTTTTCTCGGCTCTTATCAACGCTGATAAAGCAAACCAT
ACAGATCCTTCAGCAGGATTCTCTAAGTTGACTGCAGCTGAGGCCGAAAAGTCTATAGCA
GGGAACCTTTGTCGTTGTACTGGATACCGTCCCATTGCTGATGCCTGCAAGACTTTTGCT
GCAGATGTTGATATAGAGGATTTGGGGCTCAATTCTTTTTGGAAAAAGGAAGATTCCAGG
GATGTGAAAGTGAGTAAGTTACCTCCCTATGATCCAAGTAAGAACTTGAATTTTAGTACA
TTTCCTCGATTCTTGAAAAGTGAACCTGCAGCATATTTGGACTCCAGAAAGTATCCATGG
GATACTCCTGCTTCTGTTGATGAGCTTCGAAGTTTGTTGCAATCCAATTTGGCTGAAAAT
GGGGCAAGAATTAAGCTGGTTGTTGGTAACACAGGCACTGGATATTACAAGGAAACCCAG
AGATATGACCGATACATTGATCTGAGATATATCCCTGAGCTTTCAATCATCAGATTTAAT
CACATAGGAATTGAAGTAGGGGCTGCTGTGACTATCTCTAAACTTATTTCATTTTTGAAG
GAGGAAAACAAAATCAATTTGAGTTCATACGGAAAGCTGGTTAGTCAAAAGTTGGCTCAG
CACATGGAGAAGATTGCTTCACCGTTCGTTAGAAACTCAGCTAGTGTTGGGGGAAATTTG
GTTATGGCACAGAAAAACAGTTTCCCTTCCGATATTGCTACATTATTTCTTGGTCTGGAT
GCTACTATCTGTGTAATGACTAGTCAAGGACATGAAAAACTCACATTTGAGGAGTTCTTA
GCGAGACCACTGCTAGACTCGAGGAGTGTGCTGCTTACTCTTTTGATTCCATTTAAAAAG
GAAGGAAGTTCAACCTGTTCTAAGTTTTTGTTTGAAACCTATCGAGCTTCACCACGACCT
CTTGGAAATGCATTGGCATATGTACATGCTGCTTTCCTTGCTGATGTTTCTTCCCACGGG
AATGGGATCCTGATAAATGATATCCAGTTGGCTTTTGGTGGTTATGGCACAAAACATCCG
ACAAGAGCCAAACAAGTAGAAGAATATCTAACTGGGAAGATATTAAGCATTAATGTATTA
TCGGAAGCACTTAAATTAGTCAAACAAGCTGTGGTACCTGAAGATGGCACTACACACCCA
GATTACAGATCAAGCATGGTAGTCAGTTTTCTTTTCAAGTTTCTTTTTTGCTTCACCAAT
GTTGGTCCCATGATATCTGGTGGTTTGTTAAATGGGATTACTTTGGTAGAGGAGGTCTCG
GAAAGTAACAAAGATGGTTATATTAGTGAAGGGAAACCACACACACTATTATCTTCTGCT
AAGCAGGTTGTGGAATCAAGCAAAGAGTACCATCCAGTGGGTGAACCAATGAAAAAAATT
GGAGCCTCCATGCAAGCTTCTGGTGAAGCTGTTTATGTAGATGACATTCCATCACCACCA
AACTGCCTATATGGAGCATTTATCTATAGTACAAGACCATTAGCAGGGGTAAAGGGCATC
CACTTTGGGTCCAATTCATTACCTGATGGAGTTGCTGCCATTATTACTTTTAAAGATATC
CCGAGCGGAGGGGCAAATGTAGGATCTAAGACCATTTTTGCTCCCGAGCCTTTATTTGCA
GATGATCTCGCCCGATATGCTGGTGACCGAATTGCTTTTGTGGTTGCTGACAGTCAGAGG
TCTGCAGATGTGGCTGCAAGCATGGCCATTGTTGAATATGACACTGAAAATATAGATTCT
CCGATTTTAACTGTTGAGGAAGCCGTTCAGAGATCCAGTTTTTTCCAAGTCCCACCATTT
TTTTATCCAAAACAAGTTGGTGATTTCTCAAAAGGAATGACTGAAGCTGACCACAAGATT
CTCTCTGCTGAGACGAGACTTGGGTCTCAGTACTATTTTTATATGGAGACACAAACTGCT
CTAGCAGTTCCAGATGAAGATAACTGTATGGTTGTCTATGCATCAAGTCAGTGCCCTGAA
TACACAGGTAGTGCAATTGCTAGTTGTCTTGGTGTCCCCGAGCATAACATCCGTGTCGTC
ACAAGAAGGGTTGGAGGTGGCTTTGGAGGCAAGGCAGTGAAAGCAATGATTGTCTCCACA
GCTTGTGCACTTGCAGCGCTCAAGTTACAACGCCCTGTCAGGATGTACCTCAACCGAAAG
ACTGACATGATAATGGCAGGAGGGAGACACCCCATGAAAATAACATACAGTGTTGGATTT
AAGTCGAATGGCAAAATCACCGCCTTACATCTTGATTTATTGGTAAATGCTGGGATCACT
GAAGATATAAGCCCTGTGATACCTTCAAACTTTATCGGGGCTCTCAAAAAATATGATTGG
GGTGCCTTGTCTTTTGATGTAAAAGTATGTAAGACGAACCTTACCAGCAAATCAGCTATG
CGTGGCCCGGGGGAGGTGCAAGGATCTTATATTGCCGAAGCTATAATGGAACATGTAGCA
AGTGTACTGTATCTGGAGGTGGACTCCGTTAGAAACCAAAATGTTCATACCTTTGAAAGT
CTAAAATTATTCTATGAGGATTGTGCAGGAGATATAGGTGATTATACTTTGCCAGGTATC
ATTGATAAGTTGGCGACATCCTCAAATTTTGTCCAAAGAACTGAGATGATAGAACAATAT
AACCAGAAAAATATATGGAAGAAAAGGGGAATTTCTCGAGTGCCACTTGTTTATGAATCT
GTACAACGACCAACGCCTGGAAAAGTAAGCATTCTTTCGGACGGATCAGTAGTTGTAGAG
GTTGGAGGTATTGAAATCGGCCAGGGTCTATGGACAAAGGTCAAGCAAATGACTGCCTAT
GGTCTTAGCTTAATTGAAAGTAGTTGGAGTGAAGAACTTGTGGAGAAAGTACGCGTCATA
CAAGCAGACACTTTAAGTTTAGTGCAAGGCGGGTTTACTGCTGGAAGCACTACATCTGAA
TCGAGCTGTGAAGCAGTCAGACTGTGCTGCAAAATATTAGTTGAAAGACTAACCCCTCTG
AAGAAGAATTTGCAAGAACAAAATGGTTCGGTTGATTGGACTACACTGATTTACCAGGCA
AAATTTCAAGCGATAAACTTGTCAGCAAACTCTTATTATGTACCGGAATTCAGCTCCATG
AAATATCTGAACTATGGTGCTGCTGTCAGCGAGGTGGAGATAGACATCCTGACAGGAGAA
ACAAAAATTTTGCAAACAGATATTATATATGACTGTGGACAGAGTTTGAACCCAGCTGTT
GATATGGGACAGATCGAAGGGGCTTTTGTACAAGGTATTGGATTTTTTATGCTCGAAGAA
TATCTTACAAACACAGACGGATTGGTTGTTACAGATAGCACTTGGACATATAAGATCCCC
ACAATCGACACAATACCCAAAAGTTTCAATGTTCAAGTGCTAAACAGTGGACATCACGAG
AAACGTGTACTCTCGTCTAAAGCATCTGGTGAACCACCACTGCTTTTGGCATCCTCAGTT
CATTGTGCAACAAGAGCAGCCATTAAAGCAGCACGAAAACAGCTTAAACTTTGGGGTAAG
CTCGATGAGTCAGATACAGATTTCTATCTGGATGTCCCTGCAACATTGCCTGTAGTGAAG
ACACAGTGTGGCCTGAATTATGTGGAAAAATACTTGGAAACTTTGCTTGATCTGAAATCT
AGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400015312
PEP Infomation

pacid=37436753 transcript=PGSC0003DMT400022472 locus=PGSC0003DMG400008710 ID=PGSC0003DMT400022472.v4.03 annot-version=v4.03
Sequence

MEETLKNGILVFAVNGKRYELPSVDPSTTLLQFLRTETCFKSPKLGCGEGGCGACVVLLS
KYDPQLKRVEDFSVSSCLTLLCSLNGCGITTSDGLGNNKDGFHSIHERFAGFHASQCGYC
TPGMCMSFFSALINADKANHTDPSAGFSKLTAAEAEKSIAGNLCRCTGYRPIADACKTFA
ADVDIEDLGLNSFWKKEDSRDVKVSKLPPYDPSKNLNFSTFPRFLKSEPAAYLDSRKYPW
DTPASVDELRSLLQSNLAENGARIKLVVGNTGTGYYKETQRYDRYIDLRYIPELSIIRFN
HIGIEVGAAVTISKLISFLKEENKINLSSYGKLVSQKLAQHMEKIASPFVRNSASVGGNL
VMAQKNSFPSDIATLFLGLDATICVMTSQGHEKLTFEEFLARPLLDSRSVLLTLLIPFKK
EGSSTCSKFLFETYRASPRPLGNALAYVHAAFLADVSSHGNGILINDIQLAFGGYGTKHP
TRAKQVEEYLTGKILSINVLSEALKLVKQAVVPEDGTTHPDYRSSMVVSFLFKFLFCFTN
VGPMISGGLLNGITLVEEVSESNKDGYISEGKPHTLLSSAKQVVESSKEYHPVGEPMKKI
GASMQASGEAVYVDDIPSPPNCLYGAFIYSTRPLAGVKGIHFGSNSLPDGVAAIITFKDI
PSGGANVGSKTIFAPEPLFADDLARYAGDRIAFVVADSQRSADVAASMAIVEYDTENIDS
PILTVEEAVQRSSFFQVPPFFYPKQVGDFSKGMTEADHKILSAETRLGSQYYFYMETQTA
LAVPDEDNCMVVYASSQCPEYTGSAIASCLGVPEHNIRVVTRRVGGGFGGKAVKAMIVST
ACALAALKLQRPVRMYLNRKTDMIMAGGRHPMKITYSVGFKSNGKITALHLDLLVNAGIT
EDISPVIPSNFIGALKKYDWGALSFDVKVCKTNLTSKSAMRGPGEVQGSYIAEAIMEHVA
SVLYLEVDSVRNQNVHTFESLKLFYEDCAGDIGDYTLPGIIDKLATSSNFVQRTEMIEQY
NQKNIWKKRGISRVPLVYESVQRPTPGKVSILSDGSVVVEVGGIEIGQGLWTKVKQMTAY
GLSLIESSWSEELVEKVRVIQADTLSLVQGGFTAGSTTSESSCEAVRLCCKILVERLTPL
KKNLQEQNGSVDWTTLIYQAKFQAINLSANSYYVPEFSSMKYLNYGAAVSEVEIDILTGE
TKILQTDIIYDCGQSLNPAVDMGQIEGAFVQGIGFFMLEEYLTNTDGLVVTDSTWTYKIP
TIDTIPKSFNVQVLNSGHHEKRVLSSKASGEPPLLLASSVHCATRAAIKAARKQLKLWGK
LDESDTDFYLDVPATLPVVKTQCGLNYVEKYLETLLDLKSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400022472
Transcript Infomation

pacid=37436753 locus=PGSC0003DMG400008710 ID=PGSC0003DMT400022472.v4.03 annot-version=v4.03
Sequence

ATGGAGGAAACACTGAAAAATGGGATCTTGGTTTTTGCTGTCAATGGAAAAAGATATGAG
CTTCCTAGTGTTGACCCTTCAACTACTTTGCTTCAGTTTTTGCGCACTGAAACTTGCTTC
AAAAGTCCCAAGTTAGGCTGTGGTGAAGGTGGTTGTGGTGCTTGTGTTGTTCTTCTCTCA
AAGTATGATCCCCAGCTTAAACGGGTTGAAGATTTTAGTGTGAGTTCATGCCTTACTCTT
CTTTGCAGTTTAAATGGTTGCGGAATTACTACAAGTGATGGCCTTGGAAACAACAAGGAT
GGTTTCCACTCAATTCATGAAAGGTTTGCAGGTTTTCATGCTTCTCAATGTGGATATTGC
ACTCCAGGAATGTGTATGTCCTTTTTCTCGGCTCTTATCAACGCTGATAAAGCAAACCAT
ACAGATCCTTCAGCAGGATTCTCTAAGTTGACTGCAGCTGAGGCCGAAAAGTCTATAGCA
GGGAACCTTTGTCGTTGTACTGGATACCGTCCCATTGCTGATGCCTGCAAGACTTTTGCT
GCAGATGTTGATATAGAGGATTTGGGGCTCAATTCTTTTTGGAAAAAGGAAGATTCCAGG
GATGTGAAAGTGAGTAAGTTACCTCCCTATGATCCAAGTAAGAACTTGAATTTTAGTACA
TTTCCTCGATTCTTGAAAAGTGAACCTGCAGCATATTTGGACTCCAGAAAGTATCCATGG
GATACTCCTGCTTCTGTTGATGAGCTTCGAAGTTTGTTGCAATCCAATTTGGCTGAAAAT
GGGGCAAGAATTAAGCTGGTTGTTGGTAACACAGGCACTGGATATTACAAGGAAACCCAG
AGATATGACCGATACATTGATCTGAGATATATCCCTGAGCTTTCAATCATCAGATTTAAT
CACATAGGAATTGAAGTAGGGGCTGCTGTGACTATCTCTAAACTTATTTCATTTTTGAAG
GAGGAAAACAAAATCAATTTGAGTTCATACGGAAAGCTGGTTAGTCAAAAGTTGGCTCAG
CACATGGAGAAGATTGCTTCACCGTTCGTTAGAAACTCAGCTAGTGTTGGGGGAAATTTG
GTTATGGCACAGAAAAACAGTTTCCCTTCCGATATTGCTACATTATTTCTTGGTCTGGAT
GCTACTATCTGTGTAATGACTAGTCAAGGACATGAAAAACTCACATTTGAGGAGTTCTTA
GCGAGACCACTGCTAGACTCGAGGAGTGTGCTGCTTACTCTTTTGATTCCATTTAAAAAG
GAAGGAAGTTCAACCTGTTCTAAGTTTTTGTTTGAAACCTATCGAGCTTCACCACGACCT
CTTGGAAATGCATTGGCATATGTACATGCTGCTTTCCTTGCTGATGTTTCTTCCCACGGG
AATGGGATCCTGATAAATGATATCCAGTTGGCTTTTGGTGGTTATGGCACAAAACATCCG
ACAAGAGCCAAACAAGTAGAAGAATATCTAACTGGGAAGATATTAAGCATTAATGTATTA
TCGGAAGCACTTAAATTAGTCAAACAAGCTGTGGTACCTGAAGATGGCACTACACACCCA
GATTACAGATCAAGCATGGTAGTCAGTTTTCTTTTCAAGTTTCTTTTTTGCTTCACCAAT
GTTGGTCCCATGATATCTGGTGGTTTGTTAAATGGGATTACTTTGGTAGAGGAGGTCTCG
GAAAGTAACAAAGATGGTTATATTAGTGAAGGGAAACCACACACACTATTATCTTCTGCT
AAGCAGGTTGTGGAATCAAGCAAAGAGTACCATCCAGTGGGTGAACCAATGAAAAAAATT
GGAGCCTCCATGCAAGCTTCTGGTGAAGCTGTTTATGTAGATGACATTCCATCACCACCA
AACTGCCTATATGGAGCATTTATCTATAGTACAAGACCATTAGCAGGGGTAAAGGGCATC
CACTTTGGGTCCAATTCATTACCTGATGGAGTTGCTGCCATTATTACTTTTAAAGATATC
CCGAGCGGAGGGGCAAATGTAGGATCTAAGACCATTTTTGCTCCCGAGCCTTTATTTGCA
GATGATCTCGCCCGATATGCTGGTGACCGAATTGCTTTTGTGGTTGCTGACAGTCAGAGG
TCTGCAGATGTGGCTGCAAGCATGGCCATTGTTGAATATGACACTGAAAATATAGATTCT
CCGATTTTAACTGTTGAGGAAGCCGTTCAGAGATCCAGTTTTTTCCAAGTCCCACCATTT
TTTTATCCAAAACAAGTTGGTGATTTCTCAAAAGGAATGACTGAAGCTGACCACAAGATT
CTCTCTGCTGAGACGAGACTTGGGTCTCAGTACTATTTTTATATGGAGACACAAACTGCT
CTAGCAGTTCCAGATGAAGATAACTGTATGGTTGTCTATGCATCAAGTCAGTGCCCTGAA
TACACAGGTAGTGCAATTGCTAGTTGTCTTGGTGTCCCCGAGCATAACATCCGTGTCGTC
ACAAGAAGGGTTGGAGGTGGCTTTGGAGGCAAGGCAGTGAAAGCAATGATTGTCTCCACA
GCTTGTGCACTTGCAGCGCTCAAGTTACAACGCCCTGTCAGGATGTACCTCAACCGAAAG
ACTGACATGATAATGGCAGGAGGGAGACACCCCATGAAAATAACATACAGTGTTGGATTT
AAGTCGAATGGCAAAATCACCGCCTTACATCTTGATTTATTGGTAAATGCTGGGATCACT
GAAGATATAAGCCCTGTGATACCTTCAAACTTTATCGGGGCTCTCAAAAAATATGATTGG
GGTGCCTTGTCTTTTGATGTAAAAGTATGTAAGACGAACCTTACCAGCAAATCAGCTATG
CGTGGCCCGGGGGAGGTGCAAGGATCTTATATTGCCGAAGCTATAATGGAACATGTAGCA
AGTGTACTGTATCTGGAGGTGGACTCCGTTAGAAACCAAAATGTTCATACCTTTGAAAGT
CTAAAATTATTCTATGAGGATTGTGCAGGAGATATAGGTGATTATACTTTGCCAGGTATC
ATTGATAAGTTGGCGACATCCTCAAATTTTGTCCAAAGAACTGAGATGATAGAACAATAT
AACCAGAAAAATATATGGAAGAAAAGGGGAATTTCTCGAGTGCCACTTGTTTATGAATCT
GTACAACGACCAACGCCTGGAAAAGTAAGCATTCTTTCGGACGGATCAGTAGTTGTAGAG
GTTGGAGGTATTGAAATCGGCCAGGGTCTATGGACAAAGGTCAAGCAAATGACTGCCTAT
GGTCTTAGCTTAATTGAAAGTAGTTGGAGTGAAGAACTTGTGGAGAAAGTACGCGTCATA
CAAGCAGACACTTTAAGTTTAGTGCAAGGCGGGTTTACTGCTGGAAGCACTACATCTGAA
TCGAGCTGTGAAGCAGTCAGACTGTGCTGCAAAATATTAGTTGAAAGACTAACCCCTCTG
AAGAAGAATTTGCAAGAACAAAATGGTTCGGTTGATTGGACTACACTGATTTACCAGGCA
AAATTTCAAGCGATAAACTTGTCAGCAAACTCTTATTATGTACCGGAATTCAGCTCCATG
AAATATCTGAACTATGGTGCTGCTGTCAGCGAGGTGGAGATAGACATCCTGACAGGAGAA
ACAAAAATTTTGCAAACAGATATTATATATGACTGTGGACAGAGTTTGAACCCAGCTGTT
GATATGGGACAGATCGAAGGGGCTTTTGTACAAGGTATTGGATTTTTTATGCTCGAAGAA
TATCTTACAAACACAGACGGATTGGTTGTTACAGATAGCACTTGGACATATAAGATCCCC
ACAATCGACACAATACCCAAAAGTTTCAATGTTCAAGTGCTAAACAGTGGACATCACGAG
AAACGTGTACTCTCGTCTAAAGCATCTGGTGAACCACCACTGCTTTTGGCATCCTCAGTT
CATTGTGCAACAAGAGCAGCCATTAAAGCAGCACGAAAACAGCTTAAACTTTGGGGTAAG
CTCGATGAGTCAGATACAGATTTCTATCTGGATGTCCCTGCAACATTGCCTGTAGTGAAG
ACACAGTGTGGCCTGAATTATGTGGAAAAATACTTGGAAACTTTGCTTGATCTGAAATCT
AGCTAA