Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022442
CDS Infomation

pacid=37454131 polypeptide=PGSC0003DMP400015292 locus=PGSC0003DMG400008698 ID=PGSC0003DMT400022442.v4.03 annot-version=v4.03
Sequence

ATGGCCGGAAAAGGAGAAGGTCCGGCGATCGGGATCGATCTCGGAACAACGTACTCCTGC
GTCGGCATTTGGCAGGATGATCATGTAGAGATCATCGCAAATGACCAAGGCAATCGTACG
ACGCCGTCTTTCGTTGCTTTCACTGACACCGAGCGTCTCATTGGTGACTCCGCTATGAAT
CAGGCCGGCGAAAACGCTACAAACACTGTTTTCAGTAAGCTCTCACCTATCAATCTCAAT
TTTTATGATAATGCTGTGGTAACTGTACCTGCATACTTCAATGACTCGCAACGTCAGGCT
ACTAAGGATGCTGGTGTCATTGCTGGTCTAAATGTCACACGTATTATCAATGAGCCTACG
GCTGCTGCCATTGCTTATGGTCTGGATAAAAAAGCTAGCAGTGTAGGTGAGAAGAATGTG
CTTATCTTTGATCTTGGTGGTGGTACTTTTGATGTCTCCCTCCTCACTATTGAAGAGGGA
ATTTTTGAGGTCAAATCTACAACAGGAGATACTCATCTTGGAGGAGAAGATTTTGACCAG
AAATTGGTCGGTCAGTTTGTCCTGGATTTCAAGAGAAAGCATAGGAAGGACTTAACAAGT
AATCCTAGATCCTTAAGAAAATTGAGGACAGCTTGCGAGAGGGCGAAGAGAACTCTTTCT
TCAACCGAACAGGCAACTGTTGAAATTGATTCACTATATGAGGGAATTGACTTCAAATCC
AGCATCACGCGTGCCAAATTTGAGGAGTTGAACATGGAACTCTTCAAGAAGTGTGTGGAT
CCAATTGAGAAATGTTTGAGGGATGCTAGAGTGGACAAGGACAGTGTCCATGAAATCGTT
CTTGTTGGTGGATCAACTAGAATTCCCAAGGTGCAGGAGCTGTTGCAGAACTTCTTTAAC
GGGAAGGAACTTTGCAAGAGCATCAACCCCGACGAAGCTGTTGCTTATGGCGCTGCTGTG
CAAGCAGCCATTCTTAGTGGAGAGGGTAATGTGAAAGTTAAAGATTTGCGCCTTTTGGAT
GTCACCCCTTTATCGCTAGGACTCGAAACTGCTGGAGGACTTATGACTGTCCTGATTCCA
AGGAACACCACCATTCCTGCAAAGAGAAAGAAGATATTTTCAACTTATTCTGATAACCAA
TCTGAAGAGTTAATTCAGGTTTACGAGGGAGAGAGAGCAAGGACAAAAGACAACAACTTG
TTGGGTAAATTTGAGCTCTCTGGTATACATCCTGCACCAAGGGGTATTCTTCAGATAACT
GTCTGCTTTGACATTGATGCCAATGGCATCTTAAATGTTTCCGCCGAGGACAATACCACC
GGACAGAGGAAAAAAATTACAATTACGAATGACAAAGGTAGGCTGTCGAAGGAAGAGATT
GAGAAGATGGTCCAGGATGCTGAGAAGTACAAGGCAGATGATGAAGAACACAAGAAAAAA
TTAGAGGGAAAGTTGGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400015292
PEP Infomation

pacid=37454131 transcript=PGSC0003DMT400022442 locus=PGSC0003DMG400008698 ID=PGSC0003DMT400022442.v4.03 annot-version=v4.03
Sequence

MAGKGEGPAIGIDLGTTYSCVGIWQDDHVEIIANDQGNRTTPSFVAFTDTERLIGDSAMN
QAGENATNTVFSKLSPINLNFYDNAVVTVPAYFNDSQRQATKDAGVIAGLNVTRIINEPT
AAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKSTTGDTHLGGEDFDQ
KLVGQFVLDFKRKHRKDLTSNPRSLRKLRTACERAKRTLSSTEQATVEIDSLYEGIDFKS
SITRAKFEELNMELFKKCVDPIEKCLRDARVDKDSVHEIVLVGGSTRIPKVQELLQNFFN
GKELCKSINPDEAVAYGAAVQAAILSGEGNVKVKDLRLLDVTPLSLGLETAGGLMTVLIP
RNTTIPAKRKKIFSTYSDNQSEELIQVYEGERARTKDNNLLGKFELSGIHPAPRGILQIT
VCFDIDANGILNVSAEDNTTGQRKKITITNDKGRLSKEEIEKMVQDAEKYKADDEEHKKK
LEGKLA*

Transcript Sequence

Transcript ID

PGSC0003DMT400022442
Transcript Infomation

pacid=37454131 locus=PGSC0003DMG400008698 ID=PGSC0003DMT400022442.v4.03 annot-version=v4.03
Sequence

ATGGCCGGAAAAGGAGAAGGTCCGGCGATCGGGATCGATCTCGGAACAACGTACTCCTGC
GTCGGCATTTGGCAGGATGATCATGTAGAGATCATCGCAAATGACCAAGGCAATCGTACG
ACGCCGTCTTTCGTTGCTTTCACTGACACCGAGCGTCTCATTGGTGACTCCGCTATGAAT
CAGGCCGGCGAAAACGCTACAAACACTGTTTTCAGTAAGCTCTCACCTATCAATCTCAAT
TTTTATGATAATGCTGTGGTAACTGTACCTGCATACTTCAATGACTCGCAACGTCAGGCT
ACTAAGGATGCTGGTGTCATTGCTGGTCTAAATGTCACACGTATTATCAATGAGCCTACG
GCTGCTGCCATTGCTTATGGTCTGGATAAAAAAGCTAGCAGTGTAGGTGAGAAGAATGTG
CTTATCTTTGATCTTGGTGGTGGTACTTTTGATGTCTCCCTCCTCACTATTGAAGAGGGA
ATTTTTGAGGTCAAATCTACAACAGGAGATACTCATCTTGGAGGAGAAGATTTTGACCAG
AAATTGGTCGGTCAGTTTGTCCTGGATTTCAAGAGAAAGCATAGGAAGGACTTAACAAGT
AATCCTAGATCCTTAAGAAAATTGAGGACAGCTTGCGAGAGGGCGAAGAGAACTCTTTCT
TCAACCGAACAGGCAACTGTTGAAATTGATTCACTATATGAGGGAATTGACTTCAAATCC
AGCATCACGCGTGCCAAATTTGAGGAGTTGAACATGGAACTCTTCAAGAAGTGTGTGGAT
CCAATTGAGAAATGTTTGAGGGATGCTAGAGTGGACAAGGACAGTGTCCATGAAATCGTT
CTTGTTGGTGGATCAACTAGAATTCCCAAGGTGCAGGAGCTGTTGCAGAACTTCTTTAAC
GGGAAGGAACTTTGCAAGAGCATCAACCCCGACGAAGCTGTTGCTTATGGCGCTGCTGTG
CAAGCAGCCATTCTTAGTGGAGAGGGTAATGTGAAAGTTAAAGATTTGCGCCTTTTGGAT
GTCACCCCTTTATCGCTAGGACTCGAAACTGCTGGAGGACTTATGACTGTCCTGATTCCA
AGGAACACCACCATTCCTGCAAAGAGAAAGAAGATATTTTCAACTTATTCTGATAACCAA
TCTGAAGAGTTAATTCAGGTTTACGAGGGAGAGAGAGCAAGGACAAAAGACAACAACTTG
TTGGGTAAATTTGAGCTCTCTGGTATACATCCTGCACCAAGGGGTATTCTTCAGATAACT
GTCTGCTTTGACATTGATGCCAATGGCATCTTAAATGTTTCCGCCGAGGACAATACCACC
GGACAGAGGAAAAAAATTACAATTACGAATGACAAAGGTAGGCTGTCGAAGGAAGAGATT
GAGAAGATGGTCCAGGATGCTGAGAAGTACAAGGCAGATGATGAAGAACACAAGAAAAAA
TTAGAGGGAAAGTTGGCTTGA