Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022426
CDS Infomation

pacid=37480067 polypeptide=PGSC0003DMP400015285 locus=PGSC0003DMG400008693 ID=PGSC0003DMT400022426.v4.03 annot-version=v4.03
Sequence

ATGACCACCACACTTCAAGATTTGGACGATCCTGATCGGAACAAGGTTGAAAGCAATGGG
TCCAGTGTTATTAATAACAATGCCCCTATTTTAGATGAGTCTAAAGGTAAAGGTATTGAA
ACTGCGGACCCAGTGGGTTCACCTCCCTCAGTGAAATCCTCACCAACAGCTAAAGGATTT
GGCTTGAAGAAATGGAGGAGGATCAGGCGGGAAGCACACAAGGATGAGGACAGTAACACA
GACAGTGCTAAGTTGTTGAAGCGTGGTTTGTCAAGCTCTGCTGCAAACTCAGCAAAACCT
GTACATTTGTCTGCTGGAACAATCCGAAATAGTGATGGATCTGTTTCTTCAGTAAATGCA
CTATTGAGTATCCCTGATGTTCTTGTTGATGGCTTTGGTCTTATTGGTAATTCTGGGTTG
GCGATTCAGCCTATATTTTTTGGTGGAACAGACTCGGACAATAGTGAGGATCGGAGTAGT
AGGTCTTCGTCTGCAGCCAGTGTTCCAAAGTCAAGGTACGAAGCACCTATCTTCCATGGT
TATGTGCCTGTTAAGAATGGGCAGAGGACTCTGAGTGGGAAGATGGGTACTTCAGCTCAG
CAATCTCATCGGGGAAAGGGTCAGGCTGAAACTAGTAAAAAGCCTAGAGGAGAAAGGGTC
AAAATCGAGAAGGAAAACTCTCATTCAAGCATGGAATCTGACTCACAAAGCTCCAATTTT
CTACCCACGCAGAGTAATAATCATGCAACAAGTAATGGTACGAAAGGTGGAAGCTCAGTG
AATAATGATGGACAATTCAGTGATGAAGTTCTCACCAGAGAAAGACCATTCAGCGAGGAA
CTTCAGACTGCTCTAGACAGAAGAAATGGTAAGGAGTGTGAAACTCAAGAAGATCTAGGC
GCTGAATCCACCTGGGAGGTTAAAGAAGAGAGGAGTGAGTATCAGGGGTTGTCCACAGAT
CATGATCCGCTGCTGGAGTCTATCTTCACCCTTCAAGCAGCTCAGGAAAATCTTGAAAGA
GAAATTCAGAAATGGAAAGAAATTAGAATAGAAGATGATATCATTGACCATTCTGTTCAG
GATGTTGGTATTATTTCAGATTTCAGTTCAGGTGACACAGATTTTCCTGGACCAGACACA
TCTGAACAGTCACAACCCAGTAACGGTATGCAACATTCATTTAACTCGTTGGAGTCTGAA
GTGGTCAGCTTAAAGCAGAATGTTATACTATTGCAAAACAAGCTTAATGATGAAGCAGAC
TTGATTAAGTTAAAGGAAGCCAGAGTTGCTGAACTGGAAGCCATCTTAAGTAGTAACGCA
GAGAAGGAAGAAAAGAAAACAGGAAATGACTTGCACCAGAGTAGTGGGGACATTGAAAAA
GAGCTTGAGGGCCTCTTTAGGCAGAAGATTGAAGCTGAACTTGAGTATTTAGTAATATCA
AGAACCATCCAAAAGTGGAGAGCTGCAGCAGTTGATCAAGTTACTCTCATGGAAGAACAA
AAAATATTAGCTACCGAACAAGCACAGATGGTAAAGAAGCTCGAAGATTCAGAAACAAAG
GTTGCAATGCACAAGTCGCAGGTTGAAACCTTGTACAATTACTGTGATAATGTAGCCAGC
ACTAATAAAACACTGGAGCTGCGGAAGGGAGTCCGCAAGTATTGTTCCTATTTTTTGATA
CAATTGGTATTGCTGGTTATCGTATTTGGACTGTATATGTTGCAGATGTCATCTGATGCT
GTTGAAGTTGTGCCAACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400015285
PEP Infomation

pacid=37480067 transcript=PGSC0003DMT400022426 locus=PGSC0003DMG400008693 ID=PGSC0003DMT400022426.v4.03 annot-version=v4.03
Sequence

MTTTLQDLDDPDRNKVESNGSSVINNNAPILDESKGKGIETADPVGSPPSVKSSPTAKGF
GLKKWRRIRREAHKDEDSNTDSAKLLKRGLSSSAANSAKPVHLSAGTIRNSDGSVSSVNA
LLSIPDVLVDGFGLIGNSGLAIQPIFFGGTDSDNSEDRSSRSSSAASVPKSRYEAPIFHG
YVPVKNGQRTLSGKMGTSAQQSHRGKGQAETSKKPRGERVKIEKENSHSSMESDSQSSNF
LPTQSNNHATSNGTKGGSSVNNDGQFSDEVLTRERPFSEELQTALDRRNGKECETQEDLG
AESTWEVKEERSEYQGLSTDHDPLLESIFTLQAAQENLEREIQKWKEIRIEDDIIDHSVQ
DVGIISDFSSGDTDFPGPDTSEQSQPSNGMQHSFNSLESEVVSLKQNVILLQNKLNDEAD
LIKLKEARVAELEAILSSNAEKEEKKTGNDLHQSSGDIEKELEGLFRQKIEAELEYLVIS
RTIQKWRAAAVDQVTLMEEQKILATEQAQMVKKLEDSETKVAMHKSQVETLYNYCDNVAS
TNKTLELRKGVRKYCSYFLIQLVLLVIVFGLYMLQMSSDAVEVVPT*

Transcript Sequence

Transcript ID

PGSC0003DMT400022426
Transcript Infomation

pacid=37480067 locus=PGSC0003DMG400008693 ID=PGSC0003DMT400022426.v4.03 annot-version=v4.03
Sequence

ATGACCACCACACTTCAAGATTTGGACGATCCTGATCGGAACAAGGTTGAAAGCAATGGG
TCCAGTGTTATTAATAACAATGCCCCTATTTTAGATGAGTCTAAAGGTAAAGGTATTGAA
ACTGCGGACCCAGTGGGTTCACCTCCCTCAGTGAAATCCTCACCAACAGCTAAAGGATTT
GGCTTGAAGAAATGGAGGAGGATCAGGCGGGAAGCACACAAGGATGAGGACAGTAACACA
GACAGTGCTAAGTTGTTGAAGCGTGGTTTGTCAAGCTCTGCTGCAAACTCAGCAAAACCT
GTACATTTGTCTGCTGGAACAATCCGAAATAGTGATGGATCTGTTTCTTCAGTAAATGCA
CTATTGAGTATCCCTGATGTTCTTGTTGATGGCTTTGGTCTTATTGGTAATTCTGGGTTG
GCGATTCAGCCTATATTTTTTGGTGGAACAGACTCGGACAATAGTGAGGATCGGAGTAGT
AGGTCTTCGTCTGCAGCCAGTGTTCCAAAGTCAAGGTACGAAGCACCTATCTTCCATGGT
TATGTGCCTGTTAAGAATGGGCAGAGGACTCTGAGTGGGAAGATGGGTACTTCAGCTCAG
CAATCTCATCGGGGAAAGGGTCAGGCTGAAACTAGTAAAAAGCCTAGAGGAGAAAGGGTC
AAAATCGAGAAGGAAAACTCTCATTCAAGCATGGAATCTGACTCACAAAGCTCCAATTTT
CTACCCACGCAGAGTAATAATCATGCAACAAGTAATGGTACGAAAGGTGGAAGCTCAGTG
AATAATGATGGACAATTCAGTGATGAAGTTCTCACCAGAGAAAGACCATTCAGCGAGGAA
CTTCAGACTGCTCTAGACAGAAGAAATGGTAAGGAGTGTGAAACTCAAGAAGATCTAGGC
GCTGAATCCACCTGGGAGGTTAAAGAAGAGAGGAGTGAGTATCAGGGGTTGTCCACAGAT
CATGATCCGCTGCTGGAGTCTATCTTCACCCTTCAAGCAGCTCAGGAAAATCTTGAAAGA
GAAATTCAGAAATGGAAAGAAATTAGAATAGAAGATGATATCATTGACCATTCTGTTCAG
GATGTTGGTATTATTTCAGATTTCAGTTCAGGTGACACAGATTTTCCTGGACCAGACACA
TCTGAACAGTCACAACCCAGTAACGGTATGCAACATTCATTTAACTCGTTGGAGTCTGAA
GTGGTCAGCTTAAAGCAGAATGTTATACTATTGCAAAACAAGCTTAATGATGAAGCAGAC
TTGATTAAGTTAAAGGAAGCCAGAGTTGCTGAACTGGAAGCCATCTTAAGTAGTAACGCA
GAGAAGGAAGAAAAGAAAACAGGAAATGACTTGCACCAGAGTAGTGGGGACATTGAAAAA
GAGCTTGAGGGCCTCTTTAGGCAGAAGATTGAAGCTGAACTTGAGTATTTAGTAATATCA
AGAACCATCCAAAAGTGGAGAGCTGCAGCAGTTGATCAAGTTACTCTCATGGAAGAACAA
AAAATATTAGCTACCGAACAAGCACAGATGGTAAAGAAGCTCGAAGATTCAGAAACAAAG
GTTGCAATGCACAAGTCGCAGGTTGAAACCTTGTACAATTACTGTGATAATGTAGCCAGC
ACTAATAAAACACTGGAGCTGCGGAAGGGAGTCCGCAAGTATTGTTCCTATTTTTTGATA
CAATTGGTATTGCTGGTTATCGTATTTGGACTGTATATGTTGCAGATGTCATCTGATGCT
GTTGAAGTTGTGCCAACATAA