Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022422
CDS Infomation

pacid=37476584 polypeptide=PGSC0003DMP400015281 locus=PGSC0003DMG400008691 ID=PGSC0003DMT400022422.v4.03 annot-version=v4.03
Sequence

ATGGAACTGGTAGCTTACTCTGACCCCATGACTGAATCAAGTAACTCTAGTCCACCATGG
CAAGAAATGTTTAGATCTGCTGCAATGAAGAAAACAAAGAACTATGGCTCCCCACAGACT
CCTCCCAAAACCCCAGAAGCCAAAGAGAAAAAAGATCACAACTTTTTATCAGATGAAGCT
CAGGTACGCTTCGCCCTCTATATAGCGATGGCTCATGCTGGTCTTGCTTTCACAATTTTC
ATTCTTTATGCTGTTGGCAAATTGCTTGAAGAATATTTAAGGCCTATTTTGTGGGCTGTG
CTTTGTTCAATACCTTTGAGAGGAATTCAGCAAGCCCTTGTTGCATTTTGGTCTGAACCT
TTAAAGCTAGGCCTTACAGAGACCATTTTGGCGATCCCCGTTTCTGTACTCAGGATTTTT
GTTGGAACCCTTGTTGATATTAGGGAAATGATTTTCAGAGTTGTTCTACGGAGACAGAAA
GGTAGTGCTTTGAAGCGTAATCGAAGTGGATTTTTTATGTTGTTGAGGTGGCTAGTTTCA
TTTTGGGTGTTTGTGATGGCATATGAGCAAATTGGTCTCTTTGGATCAGTTGCTCTTCTT
GCATTGGGATTTATGTTTCCTGTTAACAGTGTGGAGTCTACAATGGATGCAGTAACATCT
TTCAGGAGTCATAGCTTTCGTAGACTGTCGATATCTGCTTTCTTCACTAGAGGGATATTG
AAAAGATTGAAAACCATTGTGGCAGTAGGACTTATTATTGGGCTGAGTGTAGGTTCTTTG
GCAGGTACGATTTTCTTCTCTTATGAGATTGGAGTTGAAGGAAAAGACGCTGTTATTGCG
TTGAAATCACGTGTAGAGGAGAGTAATTATGCTGAGAAAATTGGTGTCAAACAATGGATG
GATGAAAATGATGTCCCTGCTATGGTCGATAAGTACAGTAGTCAATTGTATGAGACTCTA
TTCTACCAACTAGATAGCTATGCTAAGCAGTATAATATGACTGAGTTTGTTTCCGGGATC
AAACACTTTATCACAACTCCGGTGAATAGCTCTTTTGAGCGGTCTACAGCTTTGTCATCC
CGCTCTAGATACACTAAAAAGATCATGAGCATAAAAAGGAGGATTAAGGATCGCGAATGG
AGACAAATGTATACAGAAATGGACGCGTTTTTCAAAGAATTGTTGATCACTAGAAAGGAC
TTGGTTGAAAAGGCAAAAGGATTTGCCCTTCAAGGAGCAAATATAATGCAAGGAGTAATT
ATTACTAGTACATCTCTTTTAGGTAGCAGTATGCAGGTCATGTTTTCGATTGGAAATTCT
ATACTTTCAGGAGCTGCAGGTCTTTTCAATTTCGTGTCTCAGTCGATGGTGTTCTTTTGG
GTACTTTATTATCTTATCACATCAGAGTCTGGAGGAGCAACGGAACAAGTAATATGTATG
CTTCCAATACCGCACTCTGCAAGGACTCGATGTGTTGAAGTTCTTGATAAAGCAATTTCT
GGTGTCATTTTAGCAACTGCTGAGATTGCATTCTTTCAGGGATGCCTGACTTGGCTCTTG
TTCAGATTATACTCGATACATTTTCTGTACATGTCGACTGTTCTTGCATTTATAAGTCCT
TTGTTTCCGATTTTCCCTGAGTGGCTTTCAACTATCCCAACAGCATTACAGTTAGTGTTT
GAAGGTCGATATGTATTGGCGATCAGCTTATCCTTTATCCATCTTGTGCTTATGGATTAT
GGTACTTCTGAAATTCAAGATGATATCCCTGGCTATAGTGCATATCTCACTGGTCTCAGC
ATCATCGGCGGAATGACACTGTGTTCTTCAGCAATTGAGGGAGCGATCATGGGGCCGCTA
ATAACTACTGTTGTGATTGGAATCAAAGATTTGTATGTTGAGTTTGTACTGGAAGCACAG
AAGGAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400015281
PEP Infomation

pacid=37476584 transcript=PGSC0003DMT400022422 locus=PGSC0003DMG400008691 ID=PGSC0003DMT400022422.v4.03 annot-version=v4.03
Sequence

MELVAYSDPMTESSNSSPPWQEMFRSAAMKKTKNYGSPQTPPKTPEAKEKKDHNFLSDEA
QVRFALYIAMAHAGLAFTIFILYAVGKLLEEYLRPILWAVLCSIPLRGIQQALVAFWSEP
LKLGLTETILAIPVSVLRIFVGTLVDIREMIFRVVLRRQKGSALKRNRSGFFMLLRWLVS
FWVFVMAYEQIGLFGSVALLALGFMFPVNSVESTMDAVTSFRSHSFRRLSISAFFTRGIL
KRLKTIVAVGLIIGLSVGSLAGTIFFSYEIGVEGKDAVIALKSRVEESNYAEKIGVKQWM
DENDVPAMVDKYSSQLYETLFYQLDSYAKQYNMTEFVSGIKHFITTPVNSSFERSTALSS
RSRYTKKIMSIKRRIKDREWRQMYTEMDAFFKELLITRKDLVEKAKGFALQGANIMQGVI
ITSTSLLGSSMQVMFSIGNSILSGAAGLFNFVSQSMVFFWVLYYLITSESGGATEQVICM
LPIPHSARTRCVEVLDKAISGVILATAEIAFFQGCLTWLLFRLYSIHFLYMSTVLAFISP
LFPIFPEWLSTIPTALQLVFEGRYVLAISLSFIHLVLMDYGTSEIQDDIPGYSAYLTGLS
IIGGMTLCSSAIEGAIMGPLITTVVIGIKDLYVEFVLEAQKE*

Transcript Sequence

Transcript ID

PGSC0003DMT400022422
Transcript Infomation

pacid=37476584 locus=PGSC0003DMG400008691 ID=PGSC0003DMT400022422.v4.03 annot-version=v4.03
Sequence

ATGGAACTGGTAGCTTACTCTGACCCCATGACTGAATCAAGTAACTCTAGTCCACCATGG
CAAGAAATGTTTAGATCTGCTGCAATGAAGAAAACAAAGAACTATGGCTCCCCACAGACT
CCTCCCAAAACCCCAGAAGCCAAAGAGAAAAAAGATCACAACTTTTTATCAGATGAAGCT
CAGGTACGCTTCGCCCTCTATATAGCGATGGCTCATGCTGGTCTTGCTTTCACAATTTTC
ATTCTTTATGCTGTTGGCAAATTGCTTGAAGAATATTTAAGGCCTATTTTGTGGGCTGTG
CTTTGTTCAATACCTTTGAGAGGAATTCAGCAAGCCCTTGTTGCATTTTGGTCTGAACCT
TTAAAGCTAGGCCTTACAGAGACCATTTTGGCGATCCCCGTTTCTGTACTCAGGATTTTT
GTTGGAACCCTTGTTGATATTAGGGAAATGATTTTCAGAGTTGTTCTACGGAGACAGAAA
GGTAGTGCTTTGAAGCGTAATCGAAGTGGATTTTTTATGTTGTTGAGGTGGCTAGTTTCA
TTTTGGGTGTTTGTGATGGCATATGAGCAAATTGGTCTCTTTGGATCAGTTGCTCTTCTT
GCATTGGGATTTATGTTTCCTGTTAACAGTGTGGAGTCTACAATGGATGCAGTAACATCT
TTCAGGAGTCATAGCTTTCGTAGACTGTCGATATCTGCTTTCTTCACTAGAGGGATATTG
AAAAGATTGAAAACCATTGTGGCAGTAGGACTTATTATTGGGCTGAGTGTAGGTTCTTTG
GCAGGTACGATTTTCTTCTCTTATGAGATTGGAGTTGAAGGAAAAGACGCTGTTATTGCG
TTGAAATCACGTGTAGAGGAGAGTAATTATGCTGAGAAAATTGGTGTCAAACAATGGATG
GATGAAAATGATGTCCCTGCTATGGTCGATAAGTACAGTAGTCAATTGTATGAGACTCTA
TTCTACCAACTAGATAGCTATGCTAAGCAGTATAATATGACTGAGTTTGTTTCCGGGATC
AAACACTTTATCACAACTCCGGTGAATAGCTCTTTTGAGCGGTCTACAGCTTTGTCATCC
CGCTCTAGATACACTAAAAAGATCATGAGCATAAAAAGGAGGATTAAGGATCGCGAATGG
AGACAAATGTATACAGAAATGGACGCGTTTTTCAAAGAATTGTTGATCACTAGAAAGGAC
TTGGTTGAAAAGGCAAAAGGATTTGCCCTTCAAGGAGCAAATATAATGCAAGGAGTAATT
ATTACTAGTACATCTCTTTTAGGTAGCAGTATGCAGGTCATGTTTTCGATTGGAAATTCT
ATACTTTCAGGAGCTGCAGGTCTTTTCAATTTCGTGTCTCAGTCGATGGTGTTCTTTTGG
GTACTTTATTATCTTATCACATCAGAGTCTGGAGGAGCAACGGAACAAGTAATATGTATG
CTTCCAATACCGCACTCTGCAAGGACTCGATGTGTTGAAGTTCTTGATAAAGCAATTTCT
GGTGTCATTTTAGCAACTGCTGAGATTGCATTCTTTCAGGGATGCCTGACTTGGCTCTTG
TTCAGATTATACTCGATACATTTTCTGTACATGTCGACTGTTCTTGCATTTATAAGTCCT
TTGTTTCCGATTTTCCCTGAGTGGCTTTCAACTATCCCAACAGCATTACAGTTAGTGTTT
GAAGGTCGATATGTATTGGCGATCAGCTTATCCTTTATCCATCTTGTGCTTATGGATTAT
GGTACTTCTGAAATTCAAGATGATATCCCTGGCTATAGTGCATATCTCACTGGTCTCAGC
ATCATCGGCGGAATGACACTGTGTTCTTCAGCAATTGAGGGAGCGATCATGGGGCCGCTA
ATAACTACTGTTGTGATTGGAATCAAAGATTTGTATGTTGAGTTTGTACTGGAAGCACAG
AAGGAATAA