Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022400
CDS Infomation

pacid=37477571 polypeptide=PGSC0003DMP400015269 locus=PGSC0003DMG400008686 ID=PGSC0003DMT400022400.v4.03 annot-version=v4.03
Sequence

ATGGCGTCAACACCTTCTGTCAAGAGTTCACTGGAAAAGCTGAATAAGTCAGCTGGAATT
CAAGCAGTGGAACGTAATCCTCGGAGATCAGCACCTTCCCAAGTTTCAAAGAGTAGCAAT
TCTGGGAGCACGACTTCCAAGGAGCTACAACACAATGATCGAGAAGTTGCATCTAAGCAA
CTTATGGCAGAAGCAACAACCAAAAAGAAGTCGAATAGCTATCAGCAAGTAGGATCTGCT
GACTTATTGGTTGATAAGTTTGATTCGAGCTTATATTTGGGAAATCTGAAGCATGCTCCA
AGCAGTGCAGCTTCCGCACCCTGTGAAGCAAAGGGCTCGCAATGCGCTATTGATCAGGAA
AAGAAGGCATCAGAAAATGGAGCCGTCAAGGATAACTCAGCCTCAGCCAAAGTCAGTGAT
GGGGCCGGTAGCCTTGCAAAAACAAGTGGAAGTGCCAAAGTTAGCGATCGAGCTGATTTT
GTTGAGAGTGGAAAGAGCAGCATCTGTAGGGGAAGCACAAGCACCGATGTAAGTGATGAA
AGTACTTGCAGCAGCTTTAGCACCAGTATTAATAAACCCCACAAAGCTAATGACTCAAGA
TGGGAAGCCATTCAAGCTATTCGAGCTAAAGATGGAACATTAGATTTGAGACATTTCCGG
TTGCTAAAGAAGTTGGGAAGTGGTGATATTGGAAGTGTCTATCTGTCGGAGTTGTGTGGA
ACAAAATGTTATTTTGCAATGAAAGTTATGGATAAAGCATCATTAGCTGGCCGTAAAAAA
TTGCTACGTGCTCAAACGGAGAGAGAGATATTGCAGTCCTTGGACCATCCATTTCTACCA
ACTTTATATACCCATTTTGAGACAGAAAAGTTTTCATGTCTTGTAATGGAGTTTTGCCCA
GGAGGTGACTTGCACACACTTCGTCAGAGGCAACCAGGGAAGCATTTTTCTGAACAAGCT
GTGAAGTTCTATGTAGCAGAGATCCTCCTTGCTATGGAATACCTCCACATGCTTGGCATT
GTTTATCGCGACCTCAAGCCAGAAAATGTGCTTGTTAGAGAAGATGGACACATAATGCTA
TCTGATTTTGATCTCTCTCTTCGCTGTACTGTGAGTCCAACACTTGTCAAGCTGTCGTCT
CTTGATGTGGAGCCTCTCCGAAAGAATTCCGGTTACTGTGTGCAGCCAGCATGCATTGAA
CCCTCCTGTATCCAGCCATCGTGTGCTGTTACTACAACATGTTTTGGGCCTCGCTTCTTT
TCTAGTAAGTCGAAGAAAGAAAAGAAATCTAAAAATGATACAGGGAACCAAGTTAGCCCA
TTACCAGAACTTATGGCTGAGCCTACTGGAGCACGTTCGATGTCTTTCGTTGGGACACAC
GAATATTTAGCACCTGAAATAATCAAAGGTGAAGGGCATGGGAGTGCAGTGGACTGGTGG
ACCTTTGGTATCTTTCTTTACGAGTTATTGTTTGGTAAGACACCCTTCAAGGGATCAGGA
AACCGTGCTACACTTTTCAATGTTGTAGGTCAGCCCCTCCGTTTTCCAGAATCTCCAGTG
GTAAGTTTTTCAGCTAGAGATCTTATACGAGGCTTGCTCGTGAAAGAGCCACAAAATCGA
TTGGCATACAAAAGAGGAGCTACAGAAATCAAGCAGCATCCCTTCTTCGAAGGTGTAAAC
TGGGCTTTGATTCGTTGTGCAAGCCCTCCGGAGATCCCAAGACCTGTTGAATTCGAGAGA
ATCTCAGCACAGCAGCCATCATCAACTAGTGAGAAACCTGTGGCTGTAACTGTCCAATAC
CAGCAAAAGTCTGATAACTATCTCGAATTTGATTTCTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400015269
PEP Infomation

pacid=37477571 transcript=PGSC0003DMT400022400 locus=PGSC0003DMG400008686 ID=PGSC0003DMT400022400.v4.03 annot-version=v4.03
Sequence

MASTPSVKSSLEKLNKSAGIQAVERNPRRSAPSQVSKSSNSGSTTSKELQHNDREVASKQ
LMAEATTKKKSNSYQQVGSADLLVDKFDSSLYLGNLKHAPSSAASAPCEAKGSQCAIDQE
KKASENGAVKDNSASAKVSDGAGSLAKTSGSAKVSDRADFVESGKSSICRGSTSTDVSDE
STCSSFSTSINKPHKANDSRWEAIQAIRAKDGTLDLRHFRLLKKLGSGDIGSVYLSELCG
TKCYFAMKVMDKASLAGRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCP
GGDLHTLRQRQPGKHFSEQAVKFYVAEILLAMEYLHMLGIVYRDLKPENVLVREDGHIML
SDFDLSLRCTVSPTLVKLSSLDVEPLRKNSGYCVQPACIEPSCIQPSCAVTTTCFGPRFF
SSKSKKEKKSKNDTGNQVSPLPELMAEPTGARSMSFVGTHEYLAPEIIKGEGHGSAVDWW
TFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFSARDLIRGLLVKEPQNR
LAYKRGATEIKQHPFFEGVNWALIRCASPPEIPRPVEFERISAQQPSSTSEKPVAVTVQY
QQKSDNYLEFDFF*

Transcript Sequence

Transcript ID

PGSC0003DMT400022400
Transcript Infomation

pacid=37477571 locus=PGSC0003DMG400008686 ID=PGSC0003DMT400022400.v4.03 annot-version=v4.03
Sequence

ATGGCGTCAACACCTTCTGTCAAGAGTTCACTGGAAAAGCTGAATAAGTCAGCTGGAATT
CAAGCAGTGGAACGTAATCCTCGGAGATCAGCACCTTCCCAAGTTTCAAAGAGTAGCAAT
TCTGGGAGCACGACTTCCAAGGAGCTACAACACAATGATCGAGAAGTTGCATCTAAGCAA
CTTATGGCAGAAGCAACAACCAAAAAGAAGTCGAATAGCTATCAGCAAGTAGGATCTGCT
GACTTATTGGTTGATAAGTTTGATTCGAGCTTATATTTGGGAAATCTGAAGCATGCTCCA
AGCAGTGCAGCTTCCGCACCCTGTGAAGCAAAGGGCTCGCAATGCGCTATTGATCAGGAA
AAGAAGGCATCAGAAAATGGAGCCGTCAAGGATAACTCAGCCTCAGCCAAAGTCAGTGAT
GGGGCCGGTAGCCTTGCAAAAACAAGTGGAAGTGCCAAAGTTAGCGATCGAGCTGATTTT
GTTGAGAGTGGAAAGAGCAGCATCTGTAGGGGAAGCACAAGCACCGATGTAAGTGATGAA
AGTACTTGCAGCAGCTTTAGCACCAGTATTAATAAACCCCACAAAGCTAATGACTCAAGA
TGGGAAGCCATTCAAGCTATTCGAGCTAAAGATGGAACATTAGATTTGAGACATTTCCGG
TTGCTAAAGAAGTTGGGAAGTGGTGATATTGGAAGTGTCTATCTGTCGGAGTTGTGTGGA
ACAAAATGTTATTTTGCAATGAAAGTTATGGATAAAGCATCATTAGCTGGCCGTAAAAAA
TTGCTACGTGCTCAAACGGAGAGAGAGATATTGCAGTCCTTGGACCATCCATTTCTACCA
ACTTTATATACCCATTTTGAGACAGAAAAGTTTTCATGTCTTGTAATGGAGTTTTGCCCA
GGAGGTGACTTGCACACACTTCGTCAGAGGCAACCAGGGAAGCATTTTTCTGAACAAGCT
GTGAAGTTCTATGTAGCAGAGATCCTCCTTGCTATGGAATACCTCCACATGCTTGGCATT
GTTTATCGCGACCTCAAGCCAGAAAATGTGCTTGTTAGAGAAGATGGACACATAATGCTA
TCTGATTTTGATCTCTCTCTTCGCTGTACTGTGAGTCCAACACTTGTCAAGCTGTCGTCT
CTTGATGTGGAGCCTCTCCGAAAGAATTCCGGTTACTGTGTGCAGCCAGCATGCATTGAA
CCCTCCTGTATCCAGCCATCGTGTGCTGTTACTACAACATGTTTTGGGCCTCGCTTCTTT
TCTAGTAAGTCGAAGAAAGAAAAGAAATCTAAAAATGATACAGGGAACCAAGTTAGCCCA
TTACCAGAACTTATGGCTGAGCCTACTGGAGCACGTTCGATGTCTTTCGTTGGGACACAC
GAATATTTAGCACCTGAAATAATCAAAGGTGAAGGGCATGGGAGTGCAGTGGACTGGTGG
ACCTTTGGTATCTTTCTTTACGAGTTATTGTTTGGTAAGACACCCTTCAAGGGATCAGGA
AACCGTGCTACACTTTTCAATGTTGTAGGTCAGCCCCTCCGTTTTCCAGAATCTCCAGTG
GTAAGTTTTTCAGCTAGAGATCTTATACGAGGCTTGCTCGTGAAAGAGCCACAAAATCGA
TTGGCATACAAAAGAGGAGCTACAGAAATCAAGCAGCATCCCTTCTTCGAAGGTGTAAAC
TGGGCTTTGATTCGTTGTGCAAGCCCTCCGGAGATCCCAAGACCTGTTGAATTCGAGAGA
ATCTCAGCACAGCAGCCATCATCAACTAGTGAGAAACCTGTGGCTGTAACTGTCCAATAC
CAGCAAAAGTCTGATAACTATCTCGAATTTGATTTCTTTTGA