Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022322
CDS Infomation

pacid=37464121 polypeptide=PGSC0003DMP400015218 locus=PGSC0003DMG403008663 ID=PGSC0003DMT400022322.v4.03 annot-version=v4.03
Sequence

ATGGCTTTCTCTTCATTGTTTTCCCGTTTACGTTCCTGCTCGAAACCCATTTACAGGAAC
CTACGAACTTCAAATTTTCAGAGACCCCATATTCCATCTAGCCTTACAGAGCCGGTAACT
TGCTCAAGAAAGGGGCAGGGGACAATCCCATCATGGGTTGCTTCTTTAATCCCTTTAGCC
CTTGCTGTCTCTGCTGGTTCTCTTGCATTGCAGTCACAGAACTACCCTTCACGCTGTCTG
AATGATGCTCCACTTTCTGACCCAAAAAGTGTGAAAACTGGTGGCAAAGGTAGCACAGAT
TATGTCGTGAAAGGTTCTCTTAGGAAAGTTCCACCAGAGCTTATAGAAGAATTGAAGGGA
ATTTGCCAGGATAACATGACAATGGATGAAGATGAGAGATATGTTCATGGGAAGCCACAG
AACAGCTTTCATAAAGCTGTAAACATTCCTGATGTTGTAGTTTATCCAAGGTCTGAGGAG
GAGGTGTCTAAGATAGTTAAGTCTTGTAACATGCATAAGGTCCCCATTGTTCCCTATGGT
GGAGCTACCTCTATCGAGGGACACACCTTATCTCCCTATGGTGGTGTTTGCATTGATATG
ACATTGATGAATCGTGTCAAAGCTTTGCATGTTGAGGACATGGATGTGGTGGTTGAACCA
GGCATTGGATGGATGGAGCTCAATGAATACTTGGAGTCGTATGGTCTCTTTTTCCCCCTT
GATCCTGGACCTGGGGCAACCATCGGAGGAATGTGTGCTACACGCTGCTCTGGTTCTTTA
GCAGTGAGGTATGGTACAATGCGTGATAATGTCATCAACCTCAAGGTTGTTCTAGCTGAT
GGAGAAGTTATGAAGACTGCATCCCGTGCCAGGAAAAGTGCTGCTGGATATGATTTGACA
CGGCTGCTGATTGGAAGTGAAGGCACTTTGGGTGTTATAACTGAAATTACTTTGCGCTTG
CAGAAACTTCCACAATCGTCAGTGGTTGCTATGTGCAACTTTCCTACAATTAAAGATGCA
GCGGATGTTGCTATAGCCACAATGCATTCTGGTATACAGGTGTCAAGAGTGGAGCTCTTG
GATGAAGTTCAAATTAGAGCAATCAATCTTGCAAATGACAAAAAATTGCCAGAGATTCCA
ACTTTGATGTTTGAATTTGTAGGCACAGAGGCATATGCGCGTGAGCAAACACAAATTGTT
CAGAAGATAGCTTCTGAGCACAATGGTTCTGATTTTGTTTTCGCTGAAGATCCTGAAGAG
AAAAAGGAACTCTGGAAGATAAGAAAGGAGGCACTTTGGGCTTGCTTTGCAATGAAACCT
AAGTTTGAGGCAATGATAACGGACGTGTGTGTACCCTTGTCACATCTTGCTGAACTAATT
TCAAGATCAAAACAAGAGCTGAATGCTTCTCCTTTAACGTGCACCGTCATTGCTCATGCT
GGTGATGGAAATTTCCACGTAGTAGTTCTATTTGATCCTACCAAAGAGGAACAACGACGA
GAAGCTGAAAGGTTAAACCACTTCATGGTCCATACCGCTTTATCAATGGAAGGCACCTGT
ACTGGAGAACATGGTGTTGGTACTGGGAAAATGAAGTATCTTGAAAAAGAACTTGGGATT
GAGAATTTGAGGACGATGAAAAGGATAAAGGATGCTTTAGATCCCAACAATATCATGAAC
CCCGGCAAGCTTATTCCCCCTCACATATGCTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400015218
PEP Infomation

pacid=37464121 transcript=PGSC0003DMT400022322 locus=PGSC0003DMG403008663 ID=PGSC0003DMT400022322.v4.03 annot-version=v4.03
Sequence

MAFSSLFSRLRSCSKPIYRNLRTSNFQRPHIPSSLTEPVTCSRKGQGTIPSWVASLIPLA
LAVSAGSLALQSQNYPSRCLNDAPLSDPKSVKTGGKGSTDYVVKGSLRKVPPELIEELKG
ICQDNMTMDEDERYVHGKPQNSFHKAVNIPDVVVYPRSEEEVSKIVKSCNMHKVPIVPYG
GATSIEGHTLSPYGGVCIDMTLMNRVKALHVEDMDVVVEPGIGWMELNEYLESYGLFFPL
DPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVVLADGEVMKTASRARKSAAGYDLT
RLLIGSEGTLGVITEITLRLQKLPQSSVVAMCNFPTIKDAADVAIATMHSGIQVSRVELL
DEVQIRAINLANDKKLPEIPTLMFEFVGTEAYAREQTQIVQKIASEHNGSDFVFAEDPEE
KKELWKIRKEALWACFAMKPKFEAMITDVCVPLSHLAELISRSKQELNASPLTCTVIAHA
GDGNFHVVVLFDPTKEEQRREAERLNHFMVHTALSMEGTCTGEHGVGTGKMKYLEKELGI
ENLRTMKRIKDALDPNNIMNPGKLIPPHICF*

Transcript Sequence

Transcript ID

PGSC0003DMT400022322
Transcript Infomation

pacid=37464121 locus=PGSC0003DMG403008663 ID=PGSC0003DMT400022322.v4.03 annot-version=v4.03
Sequence

ATGGCTTTCTCTTCATTGTTTTCCCGTTTACGTTCCTGCTCGAAACCCATTTACAGGAAC
CTACGAACTTCAAATTTTCAGAGACCCCATATTCCATCTAGCCTTACAGAGCCGGTAACT
TGCTCAAGAAAGGGGCAGGGGACAATCCCATCATGGGTTGCTTCTTTAATCCCTTTAGCC
CTTGCTGTCTCTGCTGGTTCTCTTGCATTGCAGTCACAGAACTACCCTTCACGCTGTCTG
AATGATGCTCCACTTTCTGACCCAAAAAGTGTGAAAACTGGTGGCAAAGGTAGCACAGAT
TATGTCGTGAAAGGTTCTCTTAGGAAAGTTCCACCAGAGCTTATAGAAGAATTGAAGGGA
ATTTGCCAGGATAACATGACAATGGATGAAGATGAGAGATATGTTCATGGGAAGCCACAG
AACAGCTTTCATAAAGCTGTAAACATTCCTGATGTTGTAGTTTATCCAAGGTCTGAGGAG
GAGGTGTCTAAGATAGTTAAGTCTTGTAACATGCATAAGGTCCCCATTGTTCCCTATGGT
GGAGCTACCTCTATCGAGGGACACACCTTATCTCCCTATGGTGGTGTTTGCATTGATATG
ACATTGATGAATCGTGTCAAAGCTTTGCATGTTGAGGACATGGATGTGGTGGTTGAACCA
GGCATTGGATGGATGGAGCTCAATGAATACTTGGAGTCGTATGGTCTCTTTTTCCCCCTT
GATCCTGGACCTGGGGCAACCATCGGAGGAATGTGTGCTACACGCTGCTCTGGTTCTTTA
GCAGTGAGGTATGGTACAATGCGTGATAATGTCATCAACCTCAAGGTTGTTCTAGCTGAT
GGAGAAGTTATGAAGACTGCATCCCGTGCCAGGAAAAGTGCTGCTGGATATGATTTGACA
CGGCTGCTGATTGGAAGTGAAGGCACTTTGGGTGTTATAACTGAAATTACTTTGCGCTTG
CAGAAACTTCCACAATCGTCAGTGGTTGCTATGTGCAACTTTCCTACAATTAAAGATGCA
GCGGATGTTGCTATAGCCACAATGCATTCTGGTATACAGGTGTCAAGAGTGGAGCTCTTG
GATGAAGTTCAAATTAGAGCAATCAATCTTGCAAATGACAAAAAATTGCCAGAGATTCCA
ACTTTGATGTTTGAATTTGTAGGCACAGAGGCATATGCGCGTGAGCAAACACAAATTGTT
CAGAAGATAGCTTCTGAGCACAATGGTTCTGATTTTGTTTTCGCTGAAGATCCTGAAGAG
AAAAAGGAACTCTGGAAGATAAGAAAGGAGGCACTTTGGGCTTGCTTTGCAATGAAACCT
AAGTTTGAGGCAATGATAACGGACGTGTGTGTACCCTTGTCACATCTTGCTGAACTAATT
TCAAGATCAAAACAAGAGCTGAATGCTTCTCCTTTAACGTGCACCGTCATTGCTCATGCT
GGTGATGGAAATTTCCACGTAGTAGTTCTATTTGATCCTACCAAAGAGGAACAACGACGA
GAAGCTGAAAGGTTAAACCACTTCATGGTCCATACCGCTTTATCAATGGAAGGCACCTGT
ACTGGAGAACATGGTGTTGGTACTGGGAAAATGAAGTATCTTGAAAAAGAACTTGGGATT
GAGAATTTGAGGACGATGAAAAGGATAAAGGATGCTTTAGATCCCAACAATATCATGAAC
CCCGGCAAGCTTATTCCCCCTCACATATGCTTTTGA