Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022277
CDS Infomation

pacid=37463496 polypeptide=PGSC0003DMP400015188 locus=PGSC0003DMG400008643 ID=PGSC0003DMT400022277.v4.03 annot-version=v4.03
Sequence

ATGGGGAGGAGTTTGAGCCCAATACTTAGAAGAGAGCTGGAGAATTTGGATAAGGATGCT
GAGAGTAGAAAATGCGCAATGAAAGCATTGAAGTCATATGTGAAAGAGCTGGATTCCAAG
GCAATCCCTCTCTTTCTTGCTCAGGTTTCTGAAACCAAAGAATCCAATGCATCATCAGGA
GAATACACAATTTCACTCTATGAGGTACTTGCTCGTGTACATGGACCTAAAATTGTTCCT
CAGATTGATAACATCATGAGCACTATTTTCAAGACCCTGACATCCAGTGCTGGATCTTTT
GCCCTTCACCAAGCTTGTTCAAAAGTTGTTCCAGCCATTGCGAGGTACAGTATGGACCCA
ACGACACCAGAGGAAAAGAAAAGATACATTATACACTCCCTCTCAAAGCCCCTTTCAGAT
TGTCTTCTGGGGAGACAGGAGAGTTTATCTTCTGGAGCTGCTCTCTGCCTAAAGTCTCTG
GTGGATTCTGATAACTGGCGGGTTGCTTCAAATGAGATGGTTCATGAGGTTTGTCAAAGA
GTTGCCGGGGCTTTGGAGAAGCATACACAAACTAATTCTCATATGGCTCTAGTCACTTCA
TTAGCCAAACACAATAGCTTAATCATGGAAGCTTATGCAAGATTGTTGATACAGTCTGGA
TTACAAATTTTAAGTAGTAGCAGTGGAGAAGGGAATTCTCAAAAGAGATTGTCCGCCATT
CATATGGTCAACTCTTTGATGAAGTATTTGGATCAAAGAAGCATACATTCTGAGCTCAGA
ATGGTTATGGAGGAGATGGAAAAATGTCAATCTGACAAGATGCTTTATGTTAGAGGGGCT
GCATTTGAAGCATTACAGACTGCAAAGAGAATATGCTCTGAGAAGGGTTCGAAATTTGAG
AGAGATGTAGATTCAATGACTGGATCCAACTTTGACAGTAGAGGGAACATGAGGAGAAAT
CTGTGGGGATCTGGTGACCAATCATCTTTAACTGCATCACCAGAATCACGCACAATTAAT
TCGTTTGTTGACTATGAACCATTTGTGGACTCCCCCGTTTCAATCAATCAGGGCCCTTAT
GTTTTGGGTAATGATAGGAGTGTGAACCGAAAACTTTGGAAGAAGAGTGCAAATGGCGGT
GTTGATGTCTCTCTAAAGGATGGCATCTTCTCCGAATTCACACATGGAAATGGTGTCATA
AACTCTGAGCACAATGAGGTTCATAATGGTACCGGAGATAACACTGCTGAATTTGCTGGA
TTTTTGCCAAGATCTGCCCGAAATGGTTTTGTCAGAAGTGCTACTCCAAGTCCTCAGAGG
TCACGCTCTCATGTTAATGTCGAAAGTGTGAAGATCTTTGCAACACCAAGAAAACTTATT
CATCTCCTTCAGGATGCCAATGATGGGAACTCAGACATTTCTGAGAGGAAAACCAGAAGG
TATAGGAGTCCATCCCTGTGCAGGTGTGAAGGAAGTCCAGAAAAGTCTGAAGTTAATGGC
CTCTTCCATTGTGAAAGGCGTGAGTATAGAGAAGGGACAACATCTAATGATGAGAAACAC
TACCATCTGAACTCCGAATCAGTATCTTCAACAGAAGATGCTCAAGTTAATGGAGATGTG
CAAGTATCTTCAAATGATGTTGCCCATAATGGAACAGAATTTCAGGGAGTCATTCCCCAA
AAAGGCTATGCTTCTGCTCGCATATTGATTTTTAGTATCTTAGCTGTACTTTTGGCAGCA
TTCATACTTTCGTTGTGGATAGGCAATCAAGACCAAAGCTTCAACCTTGTTCCCACCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400015188
PEP Infomation

pacid=37463496 transcript=PGSC0003DMT400022277 locus=PGSC0003DMG400008643 ID=PGSC0003DMT400022277.v4.03 annot-version=v4.03
Sequence

MGRSLSPILRRELENLDKDAESRKCAMKALKSYVKELDSKAIPLFLAQVSETKESNASSG
EYTISLYEVLARVHGPKIVPQIDNIMSTIFKTLTSSAGSFALHQACSKVVPAIARYSMDP
TTPEEKKRYIIHSLSKPLSDCLLGRQESLSSGAALCLKSLVDSDNWRVASNEMVHEVCQR
VAGALEKHTQTNSHMALVTSLAKHNSLIMEAYARLLIQSGLQILSSSSGEGNSQKRLSAI
HMVNSLMKYLDQRSIHSELRMVMEEMEKCQSDKMLYVRGAAFEALQTAKRICSEKGSKFE
RDVDSMTGSNFDSRGNMRRNLWGSGDQSSLTASPESRTINSFVDYEPFVDSPVSINQGPY
VLGNDRSVNRKLWKKSANGGVDVSLKDGIFSEFTHGNGVINSEHNEVHNGTGDNTAEFAG
FLPRSARNGFVRSATPSPQRSRSHVNVESVKIFATPRKLIHLLQDANDGNSDISERKTRR
YRSPSLCRCEGSPEKSEVNGLFHCERREYREGTTSNDEKHYHLNSESVSSTEDAQVNGDV
QVSSNDVAHNGTEFQGVIPQKGYASARILIFSILAVLLAAFILSLWIGNQDQSFNLVPT*

Transcript Sequence

Transcript ID

PGSC0003DMT400022277
Transcript Infomation

pacid=37463496 locus=PGSC0003DMG400008643 ID=PGSC0003DMT400022277.v4.03 annot-version=v4.03
Sequence

ATGGGGAGGAGTTTGAGCCCAATACTTAGAAGAGAGCTGGAGAATTTGGATAAGGATGCT
GAGAGTAGAAAATGCGCAATGAAAGCATTGAAGTCATATGTGAAAGAGCTGGATTCCAAG
GCAATCCCTCTCTTTCTTGCTCAGGTTTCTGAAACCAAAGAATCCAATGCATCATCAGGA
GAATACACAATTTCACTCTATGAGGTACTTGCTCGTGTACATGGACCTAAAATTGTTCCT
CAGATTGATAACATCATGAGCACTATTTTCAAGACCCTGACATCCAGTGCTGGATCTTTT
GCCCTTCACCAAGCTTGTTCAAAAGTTGTTCCAGCCATTGCGAGGTACAGTATGGACCCA
ACGACACCAGAGGAAAAGAAAAGATACATTATACACTCCCTCTCAAAGCCCCTTTCAGAT
TGTCTTCTGGGGAGACAGGAGAGTTTATCTTCTGGAGCTGCTCTCTGCCTAAAGTCTCTG
GTGGATTCTGATAACTGGCGGGTTGCTTCAAATGAGATGGTTCATGAGGTTTGTCAAAGA
GTTGCCGGGGCTTTGGAGAAGCATACACAAACTAATTCTCATATGGCTCTAGTCACTTCA
TTAGCCAAACACAATAGCTTAATCATGGAAGCTTATGCAAGATTGTTGATACAGTCTGGA
TTACAAATTTTAAGTAGTAGCAGTGGAGAAGGGAATTCTCAAAAGAGATTGTCCGCCATT
CATATGGTCAACTCTTTGATGAAGTATTTGGATCAAAGAAGCATACATTCTGAGCTCAGA
ATGGTTATGGAGGAGATGGAAAAATGTCAATCTGACAAGATGCTTTATGTTAGAGGGGCT
GCATTTGAAGCATTACAGACTGCAAAGAGAATATGCTCTGAGAAGGGTTCGAAATTTGAG
AGAGATGTAGATTCAATGACTGGATCCAACTTTGACAGTAGAGGGAACATGAGGAGAAAT
CTGTGGGGATCTGGTGACCAATCATCTTTAACTGCATCACCAGAATCACGCACAATTAAT
TCGTTTGTTGACTATGAACCATTTGTGGACTCCCCCGTTTCAATCAATCAGGGCCCTTAT
GTTTTGGGTAATGATAGGAGTGTGAACCGAAAACTTTGGAAGAAGAGTGCAAATGGCGGT
GTTGATGTCTCTCTAAAGGATGGCATCTTCTCCGAATTCACACATGGAAATGGTGTCATA
AACTCTGAGCACAATGAGGTTCATAATGGTACCGGAGATAACACTGCTGAATTTGCTGGA
TTTTTGCCAAGATCTGCCCGAAATGGTTTTGTCAGAAGTGCTACTCCAAGTCCTCAGAGG
TCACGCTCTCATGTTAATGTCGAAAGTGTGAAGATCTTTGCAACACCAAGAAAACTTATT
CATCTCCTTCAGGATGCCAATGATGGGAACTCAGACATTTCTGAGAGGAAAACCAGAAGG
TATAGGAGTCCATCCCTGTGCAGGTGTGAAGGAAGTCCAGAAAAGTCTGAAGTTAATGGC
CTCTTCCATTGTGAAAGGCGTGAGTATAGAGAAGGGACAACATCTAATGATGAGAAACAC
TACCATCTGAACTCCGAATCAGTATCTTCAACAGAAGATGCTCAAGTTAATGGAGATGTG
CAAGTATCTTCAAATGATGTTGCCCATAATGGAACAGAATTTCAGGGAGTCATTCCCCAA
AAAGGCTATGCTTCTGCTCGCATATTGATTTTTAGTATCTTAGCTGTACTTTTGGCAGCA
TTCATACTTTCGTTGTGGATAGGCAATCAAGACCAAAGCTTCAACCTTGTTCCCACCTAA