Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022155
CDS Infomation

pacid=37479772 polypeptide=PGSC0003DMP400015105 locus=PGSC0003DMG400008595 ID=PGSC0003DMT400022155.v4.03 annot-version=v4.03
Sequence

ATGGCTGATCCTGTAATTGGTGCTACTGTTCAAGTTGTGCTTGAAAAATTGCTTTCTCTC
ACTATTGAGGAGGTTAAAAGTTTAAGGAACTGCAAGAAAGATCTTGAAATGCTGGCGAAA
AATGTATCCTTGATCCAAGCTTTCATTCATGATGCTGAAAGACGACAAGTTGAAGATCAG
GCTGTTGAACAATGGCTCAAGATGCTCGAGAGAGTTGCTGAAGATGCTGAAAATGTGTTT
GACGAATTCAGGTATGAATCTCTCAAAAGACAAGTGAAGATCCGAAACAACCCAATGAAA
AAGGTCAGTGATTTCTTTTCTCATACAGATTTTAAGAGAAAAATGTCTCGAAAAATCAAC
AACATCAATGAGGAGTCGAGAGCTATCAATAAGTTAGCCAATGACCTCGGTCTCCAATCA
CTGATGGTTCCTCCTCGGCAAATACTACCAATTCGAGAAACAGATTCCGTAGTAGTTGAT
GTTGTTGGTAGAGACAAGGATGTTGCTGAAATAAAGGAGAAGATATTGACCATGAGAGAT
GATACTGATCTGTGCACCATTCCCATAGTGGGCATGGGGGGTTTAGGGAAAACAACTGTG
GCTAAGAGAATTTTTAATGATGAGCAGATCGAGAAACACTTTGAAAAGAGAGTTTGGTTG
TGTCTACCTGAAATGTCAGAAACAAAAAGCTTTCTTGAACTGATCCTCGAATCATTGACA
GAGAGGAAACTTGAGGTCCAGAGTAGAGATGTAATAGTCAAGAAGCTCCGAGATGAACTG
GCAGGAAGAAAGTATTTGCTTGTCCTGGATGATTTGTGGCGTGTTGACCCAACATTGTGG
CATGAGTTCTTGGACACTTTGAAGGGAATAAACACAACCAGAGGAAACTGCATTCTTGTG
ACGACTCGTATGAAACTGGTGGCATCCACAGTAGCTGTAGGTCTTCATATGTTGGGAAAA
TTAGCAGATGATCATTGTTGGTCCATTTTCAAACAAAGAGCATTCGTTGATGGGGAAGTT
CCAGAGGAAATGGTAATCACAGAGAACAGGATTGTTGAAATGTGTCAAGGTCTACCGTTG
GCAGCAAGTGTGTTGGGAGGCCTCATACGCAACAAGGAAAAACATGAATGGCAGGCAATT
CTTGATAGCAACTCCCTTGTTGCACATGAAGATGATCTTGGGGAAAATAGCATTAAAAAA
ATTCTAAAACTCAGCTATGTTTATCTACCATCTCCGCACCTGAAAAAATGTTTTGCTTAC
TTTGCAATGTTTCCAAAAGATTTTGAGTTTGAAAAGGACCAACTAATCCAACTCTGGATG
GCAGAAGGCTTTCTCCATCCATGTCAAGAGACCATTGTGATGGAAGATGTTGGGCACAAG
TTTTTTCAAATCTTGTTGCAAAATTCCTTGCTGCAAGATGTTAAGCTAGATGAGCACAAC
GTTATAACACACTGTAAGATGCATGATCTTGTGCATGATTTGGCTGGAGATATCTTAAAA
TCTAAACTATTTGATCCGAAAGGAGATGTTGGTGAAATGTCTTCTCAAGTTCGATATTTT
GGATTAGACTCACCAATTGATCAAATAGATAAGATAAATGAGCCAGGACGTTTGTGCGCA
TTGTTCTCGAGAAGCAATATACCTAATGATGTGCTATTTAGCTTTCAGTTCTTGAGAGTT
TTAAATTTGTCCAGATCAGGCATCAAGGAGTTGTCAGCCTCAATTGGCAAGTTAATATAC
TTGAGATATCTTGATCTCTCCTACAGTGGGATCAAAGCCTTGCCCAACTCCATTTGCAAG
CTCTACAATATGCAAACTTTGAGAGTTAGTAAATGCTTTTTACTGAAGGGGCTTCCAGAT
GAAATGGCACATATGATAAGTTTGAGACACGTTTATTACAATTCTCTGTGTATGGATAAT
AAACATTTTCAGATGCCATTTAACATGGGGAAATTGACTTGTCTTCAGACCCTACAGTTT
TTCAAAGTGGGTTTAGAGAAAGGCTGTCGAATAGAAGAAATAGGTCATTTGAAAAACCTG
AGAGGTGAATTGATGATTGGAGGTCTCCAATTGTTATGCAATAGAGAAGAAGCTCGAACA
GCGTATCTACAAGAGAAACCAAAAATCTACAAGCTGAAATATGTGTGGTCCCATGATGAA
CCAGAAGGATGTGAGACCAGTGATGAGTATGTGTTGGATGGTCTTCAACCGCATCCTAAC
TTGAAAACTTTAGCGGTAGTGGACTATTTGGGGACTAGGTTTCCTTCATGGTTCAGTGAA
GAGTTGCTACCAAATTTGGTCAAGTTGAAATTAAGTGGTTGCAAAAGGTGCAAAGAAATT
CCATCACTTGGTCAACTGAAATTCCTTCAGCATCTCGAGCTGGTAGGGTTCCATAAGGTG
GAATGCATCGGACCTACATTTTATGGTATTGATGGTAACAATAATGGATCAAGCAGCAAT
AACGCCAATATCCAAGTGTTTCCGTTACTTAAAGAACTATTATTGGAGGATATGCCTAGC
CTTACTGAGTGGAAGGAAGTGCAATTGTTACCAAAGGGAAATGTTGGTAGAGACAGACTT
GGAGTTAGAATGTTTCCTGTGCTTAAGAAGTTGACGATTAGGAACTGTCCTTTGCTAAAA
AGTACTCCAAATCAATTTGAGACCCTACGTGAATTGAGCATTGAAGGAGTTGACAGTGAA
ATTCCATTGTTGAACTTGTGCAGCAACTTGACATCTCTGGTAATGCTTATTATCAGAGAT
GTGAAACAGCTCACTTGTCTTACAGATGAGATACTATGCAACAATTTCTCTCTTGAACAT
CTTTTGGTCTTAAATTGTGGAGAGTTCCGTGAATTGCCACAAAGCTTGTACAATCTCCGT
TCTCTTAAAAGCTTAAGTATCGGCGACTGCACCAATTTCAGTTCCATTCCTGTTTCCAGA
GGAGTGAATCATTTGACTTCCCTCCTAAAACTTCGGTTATACAATTGTGATGGATTGACT
AGTTTATCAAGCGGACTGCTAGAGCATTGTCGGTCTTTGGAATCTCTGAATGTCAACAAA
TGTAACAACTTGGTTTCCTTGCCTTTACATGTGTGGGAAATGCCTTCACTTTCATATTTG
AATATATCAAAATGTCCCAAATTGGGAAGTGTACCTGCAGGGAGCCTTCACCGTCTCACA
GGGTTAAGGACATTGCATATTGGTCCTTTCTCAGAGTTGGTGGATTTTGAGGCATTCCAA
TTGATTTTTAATGGCATTCAGCAGCTATCATCCCTTTGTGTGCTGTGGGTGTACGGACAT
GCACACTGGGATTCTCTGCCCTATCAGCTTTTGGAATTCTCTTCCGTAACAGAGATCGGA
ATAACTGATTTTGGAATCAAGTCTTTTCCTATTGAAACATTGGAGCTAGTAAGCTGCAAA
CAGCTACAACATCTGCTGATCAATGATTGTCCGTACTTAGAAGCTCTGTCAGATGGGCTT
GGCAACCTTGTTTCTTTGGTAGAGTTAAGTTTATCTAACTGCAAAAATCTACAGCATCTT
CCATCCAGAGATGCCATGCGGCGCCTCACCAAATTACGGCGCCTGAACATTAAAGGCTGT
CCACAGTTGGAAGAAAGCTGCACCAATCGTAGTGGCACAAACTCACAGTGGTCCAAGATT
TCTCATATTCCACAAATTAGCGTGGAGTTCACGACAATTCAGGACTTGCGCGACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400015105
PEP Infomation

pacid=37479772 transcript=PGSC0003DMT400022155 locus=PGSC0003DMG400008595 ID=PGSC0003DMT400022155.v4.03 annot-version=v4.03
Sequence

MADPVIGATVQVVLEKLLSLTIEEVKSLRNCKKDLEMLAKNVSLIQAFIHDAERRQVEDQ
AVEQWLKMLERVAEDAENVFDEFRYESLKRQVKIRNNPMKKVSDFFSHTDFKRKMSRKIN
NINEESRAINKLANDLGLQSLMVPPRQILPIRETDSVVVDVVGRDKDVAEIKEKILTMRD
DTDLCTIPIVGMGGLGKTTVAKRIFNDEQIEKHFEKRVWLCLPEMSETKSFLELILESLT
ERKLEVQSRDVIVKKLRDELAGRKYLLVLDDLWRVDPTLWHEFLDTLKGINTTRGNCILV
TTRMKLVASTVAVGLHMLGKLADDHCWSIFKQRAFVDGEVPEEMVITENRIVEMCQGLPL
AASVLGGLIRNKEKHEWQAILDSNSLVAHEDDLGENSIKKILKLSYVYLPSPHLKKCFAY
FAMFPKDFEFEKDQLIQLWMAEGFLHPCQETIVMEDVGHKFFQILLQNSLLQDVKLDEHN
VITHCKMHDLVHDLAGDILKSKLFDPKGDVGEMSSQVRYFGLDSPIDQIDKINEPGRLCA
LFSRSNIPNDVLFSFQFLRVLNLSRSGIKELSASIGKLIYLRYLDLSYSGIKALPNSICK
LYNMQTLRVSKCFLLKGLPDEMAHMISLRHVYYNSLCMDNKHFQMPFNMGKLTCLQTLQF
FKVGLEKGCRIEEIGHLKNLRGELMIGGLQLLCNREEARTAYLQEKPKIYKLKYVWSHDE
PEGCETSDEYVLDGLQPHPNLKTLAVVDYLGTRFPSWFSEELLPNLVKLKLSGCKRCKEI
PSLGQLKFLQHLELVGFHKVECIGPTFYGIDGNNNGSSSNNANIQVFPLLKELLLEDMPS
LTEWKEVQLLPKGNVGRDRLGVRMFPVLKKLTIRNCPLLKSTPNQFETLRELSIEGVDSE
IPLLNLCSNLTSLVMLIIRDVKQLTCLTDEILCNNFSLEHLLVLNCGEFRELPQSLYNLR
SLKSLSIGDCTNFSSIPVSRGVNHLTSLLKLRLYNCDGLTSLSSGLLEHCRSLESLNVNK
CNNLVSLPLHVWEMPSLSYLNISKCPKLGSVPAGSLHRLTGLRTLHIGPFSELVDFEAFQ
LIFNGIQQLSSLCVLWVYGHAHWDSLPYQLLEFSSVTEIGITDFGIKSFPIETLELVSCK
QLQHLLINDCPYLEALSDGLGNLVSLVELSLSNCKNLQHLPSRDAMRRLTKLRRLNIKGC
PQLEESCTNRSGTNSQWSKISHIPQISVEFTTIQDLRD*

Transcript Sequence

Transcript ID

PGSC0003DMT400022155
Transcript Infomation

pacid=37479772 locus=PGSC0003DMG400008595 ID=PGSC0003DMT400022155.v4.03 annot-version=v4.03
Sequence

ATGGCTGATCCTGTAATTGGTGCTACTGTTCAAGTTGTGCTTGAAAAATTGCTTTCTCTC
ACTATTGAGGAGGTTAAAAGTTTAAGGAACTGCAAGAAAGATCTTGAAATGCTGGCGAAA
AATGTATCCTTGATCCAAGCTTTCATTCATGATGCTGAAAGACGACAAGTTGAAGATCAG
GCTGTTGAACAATGGCTCAAGATGCTCGAGAGAGTTGCTGAAGATGCTGAAAATGTGTTT
GACGAATTCAGGTATGAATCTCTCAAAAGACAAGTGAAGATCCGAAACAACCCAATGAAA
AAGGTCAGTGATTTCTTTTCTCATACAGATTTTAAGAGAAAAATGTCTCGAAAAATCAAC
AACATCAATGAGGAGTCGAGAGCTATCAATAAGTTAGCCAATGACCTCGGTCTCCAATCA
CTGATGGTTCCTCCTCGGCAAATACTACCAATTCGAGAAACAGATTCCGTAGTAGTTGAT
GTTGTTGGTAGAGACAAGGATGTTGCTGAAATAAAGGAGAAGATATTGACCATGAGAGAT
GATACTGATCTGTGCACCATTCCCATAGTGGGCATGGGGGGTTTAGGGAAAACAACTGTG
GCTAAGAGAATTTTTAATGATGAGCAGATCGAGAAACACTTTGAAAAGAGAGTTTGGTTG
TGTCTACCTGAAATGTCAGAAACAAAAAGCTTTCTTGAACTGATCCTCGAATCATTGACA
GAGAGGAAACTTGAGGTCCAGAGTAGAGATGTAATAGTCAAGAAGCTCCGAGATGAACTG
GCAGGAAGAAAGTATTTGCTTGTCCTGGATGATTTGTGGCGTGTTGACCCAACATTGTGG
CATGAGTTCTTGGACACTTTGAAGGGAATAAACACAACCAGAGGAAACTGCATTCTTGTG
ACGACTCGTATGAAACTGGTGGCATCCACAGTAGCTGTAGGTCTTCATATGTTGGGAAAA
TTAGCAGATGATCATTGTTGGTCCATTTTCAAACAAAGAGCATTCGTTGATGGGGAAGTT
CCAGAGGAAATGGTAATCACAGAGAACAGGATTGTTGAAATGTGTCAAGGTCTACCGTTG
GCAGCAAGTGTGTTGGGAGGCCTCATACGCAACAAGGAAAAACATGAATGGCAGGCAATT
CTTGATAGCAACTCCCTTGTTGCACATGAAGATGATCTTGGGGAAAATAGCATTAAAAAA
ATTCTAAAACTCAGCTATGTTTATCTACCATCTCCGCACCTGAAAAAATGTTTTGCTTAC
TTTGCAATGTTTCCAAAAGATTTTGAGTTTGAAAAGGACCAACTAATCCAACTCTGGATG
GCAGAAGGCTTTCTCCATCCATGTCAAGAGACCATTGTGATGGAAGATGTTGGGCACAAG
TTTTTTCAAATCTTGTTGCAAAATTCCTTGCTGCAAGATGTTAAGCTAGATGAGCACAAC
GTTATAACACACTGTAAGATGCATGATCTTGTGCATGATTTGGCTGGAGATATCTTAAAA
TCTAAACTATTTGATCCGAAAGGAGATGTTGGTGAAATGTCTTCTCAAGTTCGATATTTT
GGATTAGACTCACCAATTGATCAAATAGATAAGATAAATGAGCCAGGACGTTTGTGCGCA
TTGTTCTCGAGAAGCAATATACCTAATGATGTGCTATTTAGCTTTCAGTTCTTGAGAGTT
TTAAATTTGTCCAGATCAGGCATCAAGGAGTTGTCAGCCTCAATTGGCAAGTTAATATAC
TTGAGATATCTTGATCTCTCCTACAGTGGGATCAAAGCCTTGCCCAACTCCATTTGCAAG
CTCTACAATATGCAAACTTTGAGAGTTAGTAAATGCTTTTTACTGAAGGGGCTTCCAGAT
GAAATGGCACATATGATAAGTTTGAGACACGTTTATTACAATTCTCTGTGTATGGATAAT
AAACATTTTCAGATGCCATTTAACATGGGGAAATTGACTTGTCTTCAGACCCTACAGTTT
TTCAAAGTGGGTTTAGAGAAAGGCTGTCGAATAGAAGAAATAGGTCATTTGAAAAACCTG
AGAGGTGAATTGATGATTGGAGGTCTCCAATTGTTATGCAATAGAGAAGAAGCTCGAACA
GCGTATCTACAAGAGAAACCAAAAATCTACAAGCTGAAATATGTGTGGTCCCATGATGAA
CCAGAAGGATGTGAGACCAGTGATGAGTATGTGTTGGATGGTCTTCAACCGCATCCTAAC
TTGAAAACTTTAGCGGTAGTGGACTATTTGGGGACTAGGTTTCCTTCATGGTTCAGTGAA
GAGTTGCTACCAAATTTGGTCAAGTTGAAATTAAGTGGTTGCAAAAGGTGCAAAGAAATT
CCATCACTTGGTCAACTGAAATTCCTTCAGCATCTCGAGCTGGTAGGGTTCCATAAGGTG
GAATGCATCGGACCTACATTTTATGGTATTGATGGTAACAATAATGGATCAAGCAGCAAT
AACGCCAATATCCAAGTGTTTCCGTTACTTAAAGAACTATTATTGGAGGATATGCCTAGC
CTTACTGAGTGGAAGGAAGTGCAATTGTTACCAAAGGGAAATGTTGGTAGAGACAGACTT
GGAGTTAGAATGTTTCCTGTGCTTAAGAAGTTGACGATTAGGAACTGTCCTTTGCTAAAA
AGTACTCCAAATCAATTTGAGACCCTACGTGAATTGAGCATTGAAGGAGTTGACAGTGAA
ATTCCATTGTTGAACTTGTGCAGCAACTTGACATCTCTGGTAATGCTTATTATCAGAGAT
GTGAAACAGCTCACTTGTCTTACAGATGAGATACTATGCAACAATTTCTCTCTTGAACAT
CTTTTGGTCTTAAATTGTGGAGAGTTCCGTGAATTGCCACAAAGCTTGTACAATCTCCGT
TCTCTTAAAAGCTTAAGTATCGGCGACTGCACCAATTTCAGTTCCATTCCTGTTTCCAGA
GGAGTGAATCATTTGACTTCCCTCCTAAAACTTCGGTTATACAATTGTGATGGATTGACT
AGTTTATCAAGCGGACTGCTAGAGCATTGTCGGTCTTTGGAATCTCTGAATGTCAACAAA
TGTAACAACTTGGTTTCCTTGCCTTTACATGTGTGGGAAATGCCTTCACTTTCATATTTG
AATATATCAAAATGTCCCAAATTGGGAAGTGTACCTGCAGGGAGCCTTCACCGTCTCACA
GGGTTAAGGACATTGCATATTGGTCCTTTCTCAGAGTTGGTGGATTTTGAGGCATTCCAA
TTGATTTTTAATGGCATTCAGCAGCTATCATCCCTTTGTGTGCTGTGGGTGTACGGACAT
GCACACTGGGATTCTCTGCCCTATCAGCTTTTGGAATTCTCTTCCGTAACAGAGATCGGA
ATAACTGATTTTGGAATCAAGTCTTTTCCTATTGAAACATTGGAGCTAGTAAGCTGCAAA
CAGCTACAACATCTGCTGATCAATGATTGTCCGTACTTAGAAGCTCTGTCAGATGGGCTT
GGCAACCTTGTTTCTTTGGTAGAGTTAAGTTTATCTAACTGCAAAAATCTACAGCATCTT
CCATCCAGAGATGCCATGCGGCGCCTCACCAAATTACGGCGCCTGAACATTAAAGGCTGT
CCACAGTTGGAAGAAAGCTGCACCAATCGTAGTGGCACAAACTCACAGTGGTCCAAGATT
TCTCATATTCCACAAATTAGCGTGGAGTTCACGACAATTCAGGACTTGCGCGACTAG