Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022135
CDS Infomation

pacid=37456577 polypeptide=PGSC0003DMP400015090 locus=PGSC0003DMG400008588 ID=PGSC0003DMT400022135.v4.03 annot-version=v4.03
Sequence

ATGGCAGACGCTTTCCTTCAACTTCTGCTAGACAATCTCACTTCTTTCATCCATGGTAAA
CTAGTATTATTCTTCGGTTTCGAAAAGGAATTTGAAAAGCTCTCAAGCATGTTTTCCACA
ATTCAAGCTGTGCTTGAAGATGCTCAAGAGAAGCAATTGAAGGACAAGACAATAGAGAAT
TGGTTGCAGAAACTCAATGGTGCTGCGTATGAAGTCGATGACATATTGGACGAATGTAAA
AGTGAGGCAACAAGATTCGAGCAGTCTCGATTAGGGTTTTATCATCCAGGGATTATTACT
TTCCGTCACAAAATTGGGAAAAGGATGAAAGAGATAATGGAGAAAGTAGATGCAATTGCT
GAAGAAAGAAGGAAGTTTCATTTCCTTGAAAAAATTACAGAGAGACAAGCCTCTACGCGT
GAAACAGGTTTTGTTTTGACTGAACCAGAAGTCTATGGAAGGGACAAAGAGCAGGATGAG
ATAGTGAAAATTCTGATCAACAATGTTAATGTTGCCAAAGAACTTCCTGTGTTTCCTATA
ATTGGTATGGGGGGACTAGGAAAGACGACACTTGCCCAAATGATCTTCAATGATGAGAGA
GTGACTGAGCATTTCAATCCCAAAATATGGGTTTGTGTCTCAGATGATTTTGATGAGAAG
AGGTTGATAAAGACAATTGTAGGAAATATTGAAAGAAGATCTCTGGATGTTGAGGACTTG
GCTTCATTTCAGAAGAAGCTTCAGGAGTTATTGACTGGAAAACGATACTTGCTTGTCTTA
GATGATGTTTGGAATGATGATCAAGAAAAGTGGGCTAAGTTAAGAGCAGTCTTAAAGGTT
GGAGCAAGAGGTGCTTCTGTTCTAGCAACTACTCGTCTCGAAAAGGTTGGATCAATTATG
GGAACGTTAGAACCATATCGTTTGTCAAGTTTATCTCAACATGATGGCTTGCTGTTGTTT
ATGCAACGCGCGTTTGGGCAACAAAGAGAAATAAATTCTAATCTTGTGGCCGTTGGAAAG
GAGATTGTGAAGAAATGTGGTGGTGTGCCTTTAGCAGCCAAGACTCTTGGAGGTATTTTA
CGCTTCAAGAGAGAAGAAAGTGAATGGGAACATGTGAGAGATAATGAGATTTGGAATTTG
CCTCAAGATGAAAGTTCTATTCTACCTGCTCTGAGGCTGAGTTATCATCACCTTCCACTT
AATTTGAGACAATGTTTTGCATATTGTGCAGTGTTCCCAAAGGACACCAAAATGGAAAAG
GATAATCTAATCACTCTTTGGATGGCACATGGTTTTCTTTCATCGAAAGGAAATATGGAG
CTAGAAGATGTCGGTAACGAAGTATGGAAAGAATTATACATGAGGTCCTTTTTCCAAGAG
GTTGTAGTGGATGAATTTGGTAAAACGTATTTCAAGATGCATGACCTCATTCATGATTTG
GCTACATCTCTGATTTCAGCAAACACATCAAGCAGCAATATCCGTCAAGTACGAGTAGGA
GAGGAAAATAACATATTGTCCATTGGTTTTTCTAAAACAGTGCCTTCTTACTCTCCCTCA
CTCCTGAAAATGTTTGTCTCACTAAGGGTGCTTGATATGAGTTACTCGAGAGTGTATCAA
TTATCATCTTCCATCGGAAATCTAATACATTTAAGGCTCCTGAACCTGTCTAGCACTAGA
ATTCGTAGTCTTCCCAAGAGATTATGCAAGCTTCAAAATCTCCAGACTCTTAATCTAAAA
TCTTGTCGCTCACTTTCTTGTCTGCCAAAGCAAACAAGTAAACTAAGTAGTCTTCGGAAT
CTTCTGCTCGATTACTGTCCATTGACCTCAATGTCACCAAGAATAGGATCGTTGACATGC
CTTAAGACTCTAGATTGCTTTGTTATTGGCAAGAGAAAGGGCTATCGACTTGGTGAACTA
CGAAACCTAAACCTTGGTGGCTCACTTTCAATCACACACCTTGAGAGAGTGAAGAAGGAT
ATAGCTGCAAAAGAAGCCAATTTATCTGCTAAAGCAAATCTCTACTCTTTATGTATGAGT
TGGGATAGGTCCGATAGATATGAATCAGAAAATGATTTGGATGAGAAAGTGCTTAAATCC
CTCAAACCACACCCCAATCTGAAATCTTTAAAAGTAACTGGCTTCAGAGGTCTCCGTCTC
CCGGACTGGATGAACGGTTCAGTTTTGAAAAATGTTGTATCTATTGATATTGATAGCTGT
AAAAACTGTTTATGCCTTCCACCCTTTGGAGAGCTGCCTTGTCTAGAAAGTTTATGCTTA
TTCGGCGGGTCTGTGGATTATATTGAAGACAATGTTCATGGCTGTGGAAGGTTTCCATCG
TTGAGACGCCTTGTCATAAAAGGCTTTCCTAACCTGAAAGGATTGCTACAAAAGGAAGGA
AAAGATCAATTCCCCATACTTGAGGAAATGGAGATTCATGATTGCCCTATGCTCGTCTTT
CCAACCCTTGCTTGTGTCAAGAAATTGGAAGTTTGGGGCAACACAGATGCAACGTCTTTG
AGCTCCATATCTGATCTTAGCATTCTCACCTCATTGTGTATTAGTCATAACATCGAACAG
ACTTCACTCCCAGAAGAAATGTTCAAACGCCTTGCCTATCTCGAGTCCATGAGTATTTCA
TCCTTCAAAAAACTTAAAGAGCTGCCTACCAGCCTGGCCAGTCTAACTGCTTTGAAGCGT
TTGGATATTCGAAGTTGTCATTCACTAGAGAGTCTCCCCGAGCAAGTACTGGAAGGTTTA
ACTTCACTCACGGAGTTATTCATTCAGGATTGTGAGATGCTAAAAACTCTATCAGAGGGA
TTGCAACACCTAACAACCCTGACAAGATTAGTAGTTGCTCTTTGTCCAGAGATGGTGACC
TTGCCTTTCGGGATTCAAAACTTACACTCTCTTCAATCACTGGTGATCTGGAGTTGCCCT
CGCCTGCAATCACTTCCAGCTGGCATTATGGAAACAAAAAATCTGCAGGCGTTGCGAATT
GTTTATTGTCCAGAACTGGCAAAGCGCTGCGAGAAGGAGATAGGGGAGGACTGGAACAAA
ATTGCTCACATTCCAAATGTGTATATCAGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400015090
PEP Infomation

pacid=37456577 transcript=PGSC0003DMT400022135 locus=PGSC0003DMG400008588 ID=PGSC0003DMT400022135.v4.03 annot-version=v4.03
Sequence

MADAFLQLLLDNLTSFIHGKLVLFFGFEKEFEKLSSMFSTIQAVLEDAQEKQLKDKTIEN
WLQKLNGAAYEVDDILDECKSEATRFEQSRLGFYHPGIITFRHKIGKRMKEIMEKVDAIA
EERRKFHFLEKITERQASTRETGFVLTEPEVYGRDKEQDEIVKILINNVNVAKELPVFPI
IGMGGLGKTTLAQMIFNDERVTEHFNPKIWVCVSDDFDEKRLIKTIVGNIERRSLDVEDL
ASFQKKLQELLTGKRYLLVLDDVWNDDQEKWAKLRAVLKVGARGASVLATTRLEKVGSIM
GTLEPYRLSSLSQHDGLLLFMQRAFGQQREINSNLVAVGKEIVKKCGGVPLAAKTLGGIL
RFKREESEWEHVRDNEIWNLPQDESSILPALRLSYHHLPLNLRQCFAYCAVFPKDTKMEK
DNLITLWMAHGFLSSKGNMELEDVGNEVWKELYMRSFFQEVVVDEFGKTYFKMHDLIHDL
ATSLISANTSSSNIRQVRVGEENNILSIGFSKTVPSYSPSLLKMFVSLRVLDMSYSRVYQ
LSSSIGNLIHLRLLNLSSTRIRSLPKRLCKLQNLQTLNLKSCRSLSCLPKQTSKLSSLRN
LLLDYCPLTSMSPRIGSLTCLKTLDCFVIGKRKGYRLGELRNLNLGGSLSITHLERVKKD
IAAKEANLSAKANLYSLCMSWDRSDRYESENDLDEKVLKSLKPHPNLKSLKVTGFRGLRL
PDWMNGSVLKNVVSIDIDSCKNCLCLPPFGELPCLESLCLFGGSVDYIEDNVHGCGRFPS
LRRLVIKGFPNLKGLLQKEGKDQFPILEEMEIHDCPMLVFPTLACVKKLEVWGNTDATSL
SSISDLSILTSLCISHNIEQTSLPEEMFKRLAYLESMSISSFKKLKELPTSLASLTALKR
LDIRSCHSLESLPEQVLEGLTSLTELFIQDCEMLKTLSEGLQHLTTLTRLVVALCPEMVT
LPFGIQNLHSLQSLVIWSCPRLQSLPAGIMETKNLQALRIVYCPELAKRCEKEIGEDWNK
IAHIPNVYIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400022135
Transcript Infomation

pacid=37456577 locus=PGSC0003DMG400008588 ID=PGSC0003DMT400022135.v4.03 annot-version=v4.03
Sequence

ATGGCAGACGCTTTCCTTCAACTTCTGCTAGACAATCTCACTTCTTTCATCCATGGTAAA
CTAGTATTATTCTTCGGTTTCGAAAAGGAATTTGAAAAGCTCTCAAGCATGTTTTCCACA
ATTCAAGCTGTGCTTGAAGATGCTCAAGAGAAGCAATTGAAGGACAAGACAATAGAGAAT
TGGTTGCAGAAACTCAATGGTGCTGCGTATGAAGTCGATGACATATTGGACGAATGTAAA
AGTGAGGCAACAAGATTCGAGCAGTCTCGATTAGGGTTTTATCATCCAGGGATTATTACT
TTCCGTCACAAAATTGGGAAAAGGATGAAAGAGATAATGGAGAAAGTAGATGCAATTGCT
GAAGAAAGAAGGAAGTTTCATTTCCTTGAAAAAATTACAGAGAGACAAGCCTCTACGCGT
GAAACAGGTTTTGTTTTGACTGAACCAGAAGTCTATGGAAGGGACAAAGAGCAGGATGAG
ATAGTGAAAATTCTGATCAACAATGTTAATGTTGCCAAAGAACTTCCTGTGTTTCCTATA
ATTGGTATGGGGGGACTAGGAAAGACGACACTTGCCCAAATGATCTTCAATGATGAGAGA
GTGACTGAGCATTTCAATCCCAAAATATGGGTTTGTGTCTCAGATGATTTTGATGAGAAG
AGGTTGATAAAGACAATTGTAGGAAATATTGAAAGAAGATCTCTGGATGTTGAGGACTTG
GCTTCATTTCAGAAGAAGCTTCAGGAGTTATTGACTGGAAAACGATACTTGCTTGTCTTA
GATGATGTTTGGAATGATGATCAAGAAAAGTGGGCTAAGTTAAGAGCAGTCTTAAAGGTT
GGAGCAAGAGGTGCTTCTGTTCTAGCAACTACTCGTCTCGAAAAGGTTGGATCAATTATG
GGAACGTTAGAACCATATCGTTTGTCAAGTTTATCTCAACATGATGGCTTGCTGTTGTTT
ATGCAACGCGCGTTTGGGCAACAAAGAGAAATAAATTCTAATCTTGTGGCCGTTGGAAAG
GAGATTGTGAAGAAATGTGGTGGTGTGCCTTTAGCAGCCAAGACTCTTGGAGGTATTTTA
CGCTTCAAGAGAGAAGAAAGTGAATGGGAACATGTGAGAGATAATGAGATTTGGAATTTG
CCTCAAGATGAAAGTTCTATTCTACCTGCTCTGAGGCTGAGTTATCATCACCTTCCACTT
AATTTGAGACAATGTTTTGCATATTGTGCAGTGTTCCCAAAGGACACCAAAATGGAAAAG
GATAATCTAATCACTCTTTGGATGGCACATGGTTTTCTTTCATCGAAAGGAAATATGGAG
CTAGAAGATGTCGGTAACGAAGTATGGAAAGAATTATACATGAGGTCCTTTTTCCAAGAG
GTTGTAGTGGATGAATTTGGTAAAACGTATTTCAAGATGCATGACCTCATTCATGATTTG
GCTACATCTCTGATTTCAGCAAACACATCAAGCAGCAATATCCGTCAAGTACGAGTAGGA
GAGGAAAATAACATATTGTCCATTGGTTTTTCTAAAACAGTGCCTTCTTACTCTCCCTCA
CTCCTGAAAATGTTTGTCTCACTAAGGGTGCTTGATATGAGTTACTCGAGAGTGTATCAA
TTATCATCTTCCATCGGAAATCTAATACATTTAAGGCTCCTGAACCTGTCTAGCACTAGA
ATTCGTAGTCTTCCCAAGAGATTATGCAAGCTTCAAAATCTCCAGACTCTTAATCTAAAA
TCTTGTCGCTCACTTTCTTGTCTGCCAAAGCAAACAAGTAAACTAAGTAGTCTTCGGAAT
CTTCTGCTCGATTACTGTCCATTGACCTCAATGTCACCAAGAATAGGATCGTTGACATGC
CTTAAGACTCTAGATTGCTTTGTTATTGGCAAGAGAAAGGGCTATCGACTTGGTGAACTA
CGAAACCTAAACCTTGGTGGCTCACTTTCAATCACACACCTTGAGAGAGTGAAGAAGGAT
ATAGCTGCAAAAGAAGCCAATTTATCTGCTAAAGCAAATCTCTACTCTTTATGTATGAGT
TGGGATAGGTCCGATAGATATGAATCAGAAAATGATTTGGATGAGAAAGTGCTTAAATCC
CTCAAACCACACCCCAATCTGAAATCTTTAAAAGTAACTGGCTTCAGAGGTCTCCGTCTC
CCGGACTGGATGAACGGTTCAGTTTTGAAAAATGTTGTATCTATTGATATTGATAGCTGT
AAAAACTGTTTATGCCTTCCACCCTTTGGAGAGCTGCCTTGTCTAGAAAGTTTATGCTTA
TTCGGCGGGTCTGTGGATTATATTGAAGACAATGTTCATGGCTGTGGAAGGTTTCCATCG
TTGAGACGCCTTGTCATAAAAGGCTTTCCTAACCTGAAAGGATTGCTACAAAAGGAAGGA
AAAGATCAATTCCCCATACTTGAGGAAATGGAGATTCATGATTGCCCTATGCTCGTCTTT
CCAACCCTTGCTTGTGTCAAGAAATTGGAAGTTTGGGGCAACACAGATGCAACGTCTTTG
AGCTCCATATCTGATCTTAGCATTCTCACCTCATTGTGTATTAGTCATAACATCGAACAG
ACTTCACTCCCAGAAGAAATGTTCAAACGCCTTGCCTATCTCGAGTCCATGAGTATTTCA
TCCTTCAAAAAACTTAAAGAGCTGCCTACCAGCCTGGCCAGTCTAACTGCTTTGAAGCGT
TTGGATATTCGAAGTTGTCATTCACTAGAGAGTCTCCCCGAGCAAGTACTGGAAGGTTTA
ACTTCACTCACGGAGTTATTCATTCAGGATTGTGAGATGCTAAAAACTCTATCAGAGGGA
TTGCAACACCTAACAACCCTGACAAGATTAGTAGTTGCTCTTTGTCCAGAGATGGTGACC
TTGCCTTTCGGGATTCAAAACTTACACTCTCTTCAATCACTGGTGATCTGGAGTTGCCCT
CGCCTGCAATCACTTCCAGCTGGCATTATGGAAACAAAAAATCTGCAGGCGTTGCGAATT
GTTTATTGTCCAGAACTGGCAAAGCGCTGCGAGAAGGAGATAGGGGAGGACTGGAACAAA
ATTGCTCACATTCCAAATGTGTATATCAGTTAG