Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022134
CDS Infomation

pacid=37457353 polypeptide=PGSC0003DMP400015089 locus=PGSC0003DMG400008587 ID=PGSC0003DMT400022134.v4.03 annot-version=v4.03
Sequence

ATGTTTGGATGCAAATGCTTCCGTTGGAGCAAAATTTCAGATCTTTCTTCCCGAGAACCT
GATACTTTTCTTCTCCCAGAACCCATTCCTCAATGGCCTCAAGGATGTTCTGGTACAGGA
TTCGCTAGTGGTACAATTAAACTAGGGGAACTGGAGGTTCATAAAATCAGCAAGTTTGAC
TTTGTCTGGGGTTGTAATTTGTCACAAGATCGGAAACAGGGTGTTAGCTTTTATAAGCCA
AGGGGGGTGCCTGATGGATTTTTCAGCCTTGGCCACTACTGCCAATCTAACAAGAAGCCT
CTACGAGGGTTTGTGCTTGTTGCTCGGGAAGTGGCTAAACCTGAGGCAGAAGATCATTGC
AGTGGAAATCCTTGTTTGCCTGCGCTCCAGAATCCCCTTGATTACACGTTAGTCTGGAGT
TCTAATGATGGAACTGAAGAAAATTTCGATGGATCCGGTTACTTTTGGTTACCTCAACCA
CCTGAAGGTTATAAAGCCCTGGGGTTCATTGTGACTACTAATCCTGTTAAACCTGAGTTA
GGGGAAGTCAAATGTGTTCGAGGTGACCTCACTGATGAATGTGAAACTTACCGCTTGATA
CTTAAAACCAGCTCTGTGCTTTCAGAAGTACTGGCAATTTGGAGCATAAGACCGCGGCAT
AGAGGAATGCATGGTAAAGGTATTTCAGTTGGTACCTTTTTCTGCAGTAGCTATTGGAGC
ACAGGGCAAGAGTTAAACATCGCATGCCTAAAGAACTTCGATACGAGTCTACAAGCAATG
CCAAACCTTGATCAGATTCATGCAATCATTAGGCACTATGGTCCTACTTTGTTTTTTCAT
CCCAGCGAGACCTATCTTCCATCTTCTGTACAATGGTTCCTTGACAATGGCGCAATGCTC
TATACAAGAGGCGATTCAGTTGCTAAGCCCATTGAGCCTGAAGGTTCCAATTTACCTGGT
GGTGGGACAAACGATGGCCAATGTTGGATTGATTTGCCTAGCGATGTCCGCAGGGATATT
GTCATATTTGGAAATTTAGAGAGTGCAAAACTTTATGTTCATGTTAAGCCAGCCTTAGGT
GGTACTTTCACAGATCTTGCAATGTGGATTTTTTGCCCCTTCAATGGACCAGCTACTCTA
AAGGTAGGAGTAGTGAATGTTCCTCTAAGCAAAGTCGGTCAGCATGTAGGTGATTGGGAG
CATTTCACTCTCCGAGTGAGCAATTGCACAGGAGAGTTGTGGAGTATCTATTTTTCTCAA
CACAGTGGTGGTGAATGGGTGGATGCTTATGATTTGGAGTTCATTGCAGGAAATAAAGCT
ATTGTTTATTCATCAAAGGGTGGCCATGCTAGCTTTCCTCATCCTGGAACTTACATTCAA
GGGTCCTCAAAGCTAGGGATTGGAATTAGAAATGATGTTGCACGTAGTAATCTCTATGTA
GATTCAAGTACCCAGTATGAAATTATTGCAGCACAGTATCTCGGACATGAAGCTGTTAGT
GAGCCATGTTGGTTACAATACATGAGAGAGTGGGGTCCAACCATTATTTATGACTCAAGA
AAGGAGCTTGAGAAAATTGTTAATCGCTTGCCAATAATGGTTCGAAATTCAGTACAGAGT
ATTTTTGATAAGCTGCCAATGGAACTGTTTAAGGAGGAAGGCCCTACTGGGCCAAAGGAG
AAGAACAATTGGTTTGGAGACGAAAGATGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400015089
PEP Infomation

pacid=37457353 transcript=PGSC0003DMT400022134 locus=PGSC0003DMG400008587 ID=PGSC0003DMT400022134.v4.03 annot-version=v4.03
Sequence

MFGCKCFRWSKISDLSSREPDTFLLPEPIPQWPQGCSGTGFASGTIKLGELEVHKISKFD
FVWGCNLSQDRKQGVSFYKPRGVPDGFFSLGHYCQSNKKPLRGFVLVAREVAKPEAEDHC
SGNPCLPALQNPLDYTLVWSSNDGTEENFDGSGYFWLPQPPEGYKALGFIVTTNPVKPEL
GEVKCVRGDLTDECETYRLILKTSSVLSEVLAIWSIRPRHRGMHGKGISVGTFFCSSYWS
TGQELNIACLKNFDTSLQAMPNLDQIHAIIRHYGPTLFFHPSETYLPSSVQWFLDNGAML
YTRGDSVAKPIEPEGSNLPGGGTNDGQCWIDLPSDVRRDIVIFGNLESAKLYVHVKPALG
GTFTDLAMWIFCPFNGPATLKVGVVNVPLSKVGQHVGDWEHFTLRVSNCTGELWSIYFSQ
HSGGEWVDAYDLEFIAGNKAIVYSSKGGHASFPHPGTYIQGSSKLGIGIRNDVARSNLYV
DSSTQYEIIAAQYLGHEAVSEPCWLQYMREWGPTIIYDSRKELEKIVNRLPIMVRNSVQS
IFDKLPMELFKEEGPTGPKEKNNWFGDERW*

Transcript Sequence

Transcript ID

PGSC0003DMT400022134
Transcript Infomation

pacid=37457353 locus=PGSC0003DMG400008587 ID=PGSC0003DMT400022134.v4.03 annot-version=v4.03
Sequence

ATGTTTGGATGCAAATGCTTCCGTTGGAGCAAAATTTCAGATCTTTCTTCCCGAGAACCT
GATACTTTTCTTCTCCCAGAACCCATTCCTCAATGGCCTCAAGGATGTTCTGGTACAGGA
TTCGCTAGTGGTACAATTAAACTAGGGGAACTGGAGGTTCATAAAATCAGCAAGTTTGAC
TTTGTCTGGGGTTGTAATTTGTCACAAGATCGGAAACAGGGTGTTAGCTTTTATAAGCCA
AGGGGGGTGCCTGATGGATTTTTCAGCCTTGGCCACTACTGCCAATCTAACAAGAAGCCT
CTACGAGGGTTTGTGCTTGTTGCTCGGGAAGTGGCTAAACCTGAGGCAGAAGATCATTGC
AGTGGAAATCCTTGTTTGCCTGCGCTCCAGAATCCCCTTGATTACACGTTAGTCTGGAGT
TCTAATGATGGAACTGAAGAAAATTTCGATGGATCCGGTTACTTTTGGTTACCTCAACCA
CCTGAAGGTTATAAAGCCCTGGGGTTCATTGTGACTACTAATCCTGTTAAACCTGAGTTA
GGGGAAGTCAAATGTGTTCGAGGTGACCTCACTGATGAATGTGAAACTTACCGCTTGATA
CTTAAAACCAGCTCTGTGCTTTCAGAAGTACTGGCAATTTGGAGCATAAGACCGCGGCAT
AGAGGAATGCATGGTAAAGGTATTTCAGTTGGTACCTTTTTCTGCAGTAGCTATTGGAGC
ACAGGGCAAGAGTTAAACATCGCATGCCTAAAGAACTTCGATACGAGTCTACAAGCAATG
CCAAACCTTGATCAGATTCATGCAATCATTAGGCACTATGGTCCTACTTTGTTTTTTCAT
CCCAGCGAGACCTATCTTCCATCTTCTGTACAATGGTTCCTTGACAATGGCGCAATGCTC
TATACAAGAGGCGATTCAGTTGCTAAGCCCATTGAGCCTGAAGGTTCCAATTTACCTGGT
GGTGGGACAAACGATGGCCAATGTTGGATTGATTTGCCTAGCGATGTCCGCAGGGATATT
GTCATATTTGGAAATTTAGAGAGTGCAAAACTTTATGTTCATGTTAAGCCAGCCTTAGGT
GGTACTTTCACAGATCTTGCAATGTGGATTTTTTGCCCCTTCAATGGACCAGCTACTCTA
AAGGTAGGAGTAGTGAATGTTCCTCTAAGCAAAGTCGGTCAGCATGTAGGTGATTGGGAG
CATTTCACTCTCCGAGTGAGCAATTGCACAGGAGAGTTGTGGAGTATCTATTTTTCTCAA
CACAGTGGTGGTGAATGGGTGGATGCTTATGATTTGGAGTTCATTGCAGGAAATAAAGCT
ATTGTTTATTCATCAAAGGGTGGCCATGCTAGCTTTCCTCATCCTGGAACTTACATTCAA
GGGTCCTCAAAGCTAGGGATTGGAATTAGAAATGATGTTGCACGTAGTAATCTCTATGTA
GATTCAAGTACCCAGTATGAAATTATTGCAGCACAGTATCTCGGACATGAAGCTGTTAGT
GAGCCATGTTGGTTACAATACATGAGAGAGTGGGGTCCAACCATTATTTATGACTCAAGA
AAGGAGCTTGAGAAAATTGTTAATCGCTTGCCAATAATGGTTCGAAATTCAGTACAGAGT
ATTTTTGATAAGCTGCCAATGGAACTGTTTAAGGAGGAAGGCCCTACTGGGCCAAAGGAG
AAGAACAATTGGTTTGGAGACGAAAGATGGTAG