Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022119
CDS Infomation

pacid=37456155 polypeptide=PGSC0003DMP400015077 locus=PGSC0003DMG400008581 ID=PGSC0003DMT400022119.v4.03 annot-version=v4.03
Sequence

ATGAATTTATTAACCATTTTCATACTCTTCTTGTTCTACTATTACAGTTTTTTTGCTAAC
GGGGTGTTTGCGAAAGTTGATTTGAATGATGAGGTGTCTATTCTACTTTCTATTAAAGAA
AGTCTCGTTGATCCATTGGATCATCTTCGTGATTGGACAGTGCCCAATAATGCAGCTGCA
GGGAACAATAGAAGTATTATTGTTCCCTGCAGCTGGACGGGAGTTGAATGCAACTCCCAT
GGGGCTGTCGAGAAGCTTGATCTGTCCCACATGAATCTCACTGGCACAGTGTCTAATGAT
ATCCAAAAGTTGAAGAGTTTGACTTCTCTCAATCTATGCTGCAATGAGTTTTCATCGCCA
TTGCCGAAAAGTTTGTCAAATCTAACTGCATTGAGAAGCATTGATGTGAGCCAGAACTAT
TTTGTCTATGACTTCCCTGTAGGTCTTGGAATGTCAGAAGCGCTTATGTATTTGAATGCT
TCGAGTAATAACTTCTCCGGTTATCTTCCTGAGGATATTGGAAATGCTACATTGCTCGAG
ACATTGGATTTTCGAGGGAATTTCTTCGAAGGTTCAATTCCTAAATCTTATAGGAATTTG
GGGAAATTGAAGTTTTTAGGTCTTTCAGGGAACAATTTGACTGGCTACATTCCGGGAGAG
CTGGGGCAGCTTTCGTCGCTTGAGACTGTAGTACTGGGATACAATCTTTTTGAAGGTGGA
ATTCCAGCTGAATTTGGAAATCTGACAAATCTCAAGTATCTTGATCTTGCTATTGGAAAT
CTTGGAGGTTCAATTCCTTCTGAGCTAGGAAAGCTGAAGCTGCTTGATACGATTTTCTTG
TACAAGAACAAGTTTGAAGGCAAGATTCCGCCAGAGATTGGCAATATGACTTCATTGCAG
TTGCTTGATCTGTCTGATAACATGCTTACGGGTGAAATTCCAGCTGAGATTGCTGAACTT
AAGAATTTGCAGCTTTTGAATATAATGTCGAACAAATTATCAGGTTCAGTTCCCCCTGGG
ATTGGAGGTTTGACTCAGCTGGAAGTAGTTGAGCTGTGGAATAACAGCTTATCAGGTCCT
TTGCCAAGTGATCTTGGAAGAAATTCGCCATTGCAATGGGTGGATATTTCATCCAACTCA
TTTACCGGTCCAATTCCAGCAGGATTATGCGCCAAAGGTAACCTCACTAAGCTTATCATG
TTTAACAATGCTTTCTCTGGTCCAATTCCAACTGGTTTATCAACCTGCACGTCCCTCGTT
CGTGTAAGAATGCAGAACAATCTTCTTTCGGGGACGATCCCAGCAGGTTTTGGTAAACTT
GGGAAACTACAGAGGCTGGAACTGGCAAACAATAGTCTGACAGGACAAATCCCAAGTGAT
CTTGCTTCTTCTACCTCTCTTTCTTTTATTGATTTCTCTAGAAACCACATTCAGTCTTCT
ATTCCTTCATTCATTCTTGCAATTCCAACTCTTCAAAATTTCATTGCCTCCGACAATAAG
ATGACAGGCGAAATCCCGGATCAATTCCAGGATTGTCCTTCTCTTACTGTTCTGGATCTA
TCCACAAACCATTTCACTGGAGATCTTCCAGCTAGCATTGCTTCCTGTGAGAAGTTAGTA
ACTTTGAACCTTCGAAACAACCAATTAAACGGTCCAATTCCAAGAGCTATTTCCATGATG
CCCACATTAGCTATTCTAGATCTATCCAATAATTCTTTAACTGGTGGGATACCTGAGAAC
TTTGGCAATTCACCAGCACTAGAAATGCTGAATGTTTCTCATAACAAACTGGAGGGTCCT
GTTCCGGAAAATGGCATGTTGAGAACAATCAATCCAGATGACCTGATTGGAAATGCCGGT
CTATGTGGTGGAGTGCTTCCTCCATGTTCTCATAATGCAGCATACACATCAAAGCAGAAG
AGCTTGCACGCGAAGCACATCATCACAGGATGGCTAACTGGTGTAGCAGCTCTTCTGCTT
TTTTTGACAGCAGGTCTTGTAGCTAGATCTCTATACAAGAGATGGCATGAAAATGGGAGC
TGCTTTGAACCAAGCTTTGAGATGAGCCGTGGTGAATGGCCATGGAGGTTGATGGCATTC
CAGAGGCTAGGATTCACTAGTAATGACATCTTGGCTTGCCTTAAAGAGTCAAATGTCATT
GGAATGGGAGCAACAGGGGTTGTATACAAAGCTGAAATGCAACGCGAGAATATGGTTGTT
GCAGTAAAGAAGCTGTGGAAATCTGGAACTGATATTGAGATGGGGCACAGTGATGATCTC
GTAGGTGAGGTGAATGTTCTTGGAAAATTGAGGCATCGAAATATTGTCAGGCTTCTGGGG
TTCCTTCACAACAAACGTGATGCAATGATACTATACGAGTATATGCAAAATGGTAGCCTT
GGAGAGGTTTTACATGGTAAACAAGCAGCAGGGAGACTGCTTGTTGATTGGGTCACTCGA
TATAACATAGCCCTTGGAGTGGCACAAGGCCTTGCTTATCTCCATCATTACTGCCATCCA
CCAGTTATTCACCGGGATGTCAAGTCAAATAACATACTTCTTGATGCAAATCTAGAGGCA
AGAATTGCAGATTTTGGTTTGGCAAGAACGATGCTCAAGAAGAATGAAACAGTTTCCATG
GTTGCTGGATCTTATGGATACATAGCCCCCGAGTACGGATACACGTTGAAAGTGGATGAG
AAGAGTGATATTTACAGCTATGGAGTTGTTCTCATGGAGCTCCTAACGGGTAAACGACCT
CTAGATCCTGAATTTGGGGAATCTGTTGACATTGTAGAGTGGTTTCGGATGAAGATCCGA
GACAACAAGTCTTTAGAAGAAGCACTTGACCCACATGTAGGAGCAACACAACATGTTCAA
GAAGAAATGTTGTTAGTTTTAAGGATAGCAATTCTATGTATAGCCAAACTCCCCAAGGAC
AGACCATCCATGAGGGATGTTTTGACGATGCTCGAAGAGGCAAAGCCTCGGAGAAAAAGC
AGTAGCAACAGTGGAGATAGCCATGATGCTACTACTAACAAAGATAAGCCAATATTCAGT
ACATCACCTGTAAATGGTCTTTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400015077
PEP Infomation

pacid=37456155 transcript=PGSC0003DMT400022119 locus=PGSC0003DMG400008581 ID=PGSC0003DMT400022119.v4.03 annot-version=v4.03
Sequence

MNLLTIFILFLFYYYSFFANGVFAKVDLNDEVSILLSIKESLVDPLDHLRDWTVPNNAAA
GNNRSIIVPCSWTGVECNSHGAVEKLDLSHMNLTGTVSNDIQKLKSLTSLNLCCNEFSSP
LPKSLSNLTALRSIDVSQNYFVYDFPVGLGMSEALMYLNASSNNFSGYLPEDIGNATLLE
TLDFRGNFFEGSIPKSYRNLGKLKFLGLSGNNLTGYIPGELGQLSSLETVVLGYNLFEGG
IPAEFGNLTNLKYLDLAIGNLGGSIPSELGKLKLLDTIFLYKNKFEGKIPPEIGNMTSLQ
LLDLSDNMLTGEIPAEIAELKNLQLLNIMSNKLSGSVPPGIGGLTQLEVVELWNNSLSGP
LPSDLGRNSPLQWVDISSNSFTGPIPAGLCAKGNLTKLIMFNNAFSGPIPTGLSTCTSLV
RVRMQNNLLSGTIPAGFGKLGKLQRLELANNSLTGQIPSDLASSTSLSFIDFSRNHIQSS
IPSFILAIPTLQNFIASDNKMTGEIPDQFQDCPSLTVLDLSTNHFTGDLPASIASCEKLV
TLNLRNNQLNGPIPRAISMMPTLAILDLSNNSLTGGIPENFGNSPALEMLNVSHNKLEGP
VPENGMLRTINPDDLIGNAGLCGGVLPPCSHNAAYTSKQKSLHAKHIITGWLTGVAALLL
FLTAGLVARSLYKRWHENGSCFEPSFEMSRGEWPWRLMAFQRLGFTSNDILACLKESNVI
GMGATGVVYKAEMQRENMVVAVKKLWKSGTDIEMGHSDDLVGEVNVLGKLRHRNIVRLLG
FLHNKRDAMILYEYMQNGSLGEVLHGKQAAGRLLVDWVTRYNIALGVAQGLAYLHHYCHP
PVIHRDVKSNNILLDANLEARIADFGLARTMLKKNETVSMVAGSYGYIAPEYGYTLKVDE
KSDIYSYGVVLMELLTGKRPLDPEFGESVDIVEWFRMKIRDNKSLEEALDPHVGATQHVQ
EEMLLVLRIAILCIAKLPKDRPSMRDVLTMLEEAKPRRKSSSNSGDSHDATTNKDKPIFS
TSPVNGLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400022119
Transcript Infomation

pacid=37456155 locus=PGSC0003DMG400008581 ID=PGSC0003DMT400022119.v4.03 annot-version=v4.03
Sequence

ATGAATTTATTAACCATTTTCATACTCTTCTTGTTCTACTATTACAGTTTTTTTGCTAAC
GGGGTGTTTGCGAAAGTTGATTTGAATGATGAGGTGTCTATTCTACTTTCTATTAAAGAA
AGTCTCGTTGATCCATTGGATCATCTTCGTGATTGGACAGTGCCCAATAATGCAGCTGCA
GGGAACAATAGAAGTATTATTGTTCCCTGCAGCTGGACGGGAGTTGAATGCAACTCCCAT
GGGGCTGTCGAGAAGCTTGATCTGTCCCACATGAATCTCACTGGCACAGTGTCTAATGAT
ATCCAAAAGTTGAAGAGTTTGACTTCTCTCAATCTATGCTGCAATGAGTTTTCATCGCCA
TTGCCGAAAAGTTTGTCAAATCTAACTGCATTGAGAAGCATTGATGTGAGCCAGAACTAT
TTTGTCTATGACTTCCCTGTAGGTCTTGGAATGTCAGAAGCGCTTATGTATTTGAATGCT
TCGAGTAATAACTTCTCCGGTTATCTTCCTGAGGATATTGGAAATGCTACATTGCTCGAG
ACATTGGATTTTCGAGGGAATTTCTTCGAAGGTTCAATTCCTAAATCTTATAGGAATTTG
GGGAAATTGAAGTTTTTAGGTCTTTCAGGGAACAATTTGACTGGCTACATTCCGGGAGAG
CTGGGGCAGCTTTCGTCGCTTGAGACTGTAGTACTGGGATACAATCTTTTTGAAGGTGGA
ATTCCAGCTGAATTTGGAAATCTGACAAATCTCAAGTATCTTGATCTTGCTATTGGAAAT
CTTGGAGGTTCAATTCCTTCTGAGCTAGGAAAGCTGAAGCTGCTTGATACGATTTTCTTG
TACAAGAACAAGTTTGAAGGCAAGATTCCGCCAGAGATTGGCAATATGACTTCATTGCAG
TTGCTTGATCTGTCTGATAACATGCTTACGGGTGAAATTCCAGCTGAGATTGCTGAACTT
AAGAATTTGCAGCTTTTGAATATAATGTCGAACAAATTATCAGGTTCAGTTCCCCCTGGG
ATTGGAGGTTTGACTCAGCTGGAAGTAGTTGAGCTGTGGAATAACAGCTTATCAGGTCCT
TTGCCAAGTGATCTTGGAAGAAATTCGCCATTGCAATGGGTGGATATTTCATCCAACTCA
TTTACCGGTCCAATTCCAGCAGGATTATGCGCCAAAGGTAACCTCACTAAGCTTATCATG
TTTAACAATGCTTTCTCTGGTCCAATTCCAACTGGTTTATCAACCTGCACGTCCCTCGTT
CGTGTAAGAATGCAGAACAATCTTCTTTCGGGGACGATCCCAGCAGGTTTTGGTAAACTT
GGGAAACTACAGAGGCTGGAACTGGCAAACAATAGTCTGACAGGACAAATCCCAAGTGAT
CTTGCTTCTTCTACCTCTCTTTCTTTTATTGATTTCTCTAGAAACCACATTCAGTCTTCT
ATTCCTTCATTCATTCTTGCAATTCCAACTCTTCAAAATTTCATTGCCTCCGACAATAAG
ATGACAGGCGAAATCCCGGATCAATTCCAGGATTGTCCTTCTCTTACTGTTCTGGATCTA
TCCACAAACCATTTCACTGGAGATCTTCCAGCTAGCATTGCTTCCTGTGAGAAGTTAGTA
ACTTTGAACCTTCGAAACAACCAATTAAACGGTCCAATTCCAAGAGCTATTTCCATGATG
CCCACATTAGCTATTCTAGATCTATCCAATAATTCTTTAACTGGTGGGATACCTGAGAAC
TTTGGCAATTCACCAGCACTAGAAATGCTGAATGTTTCTCATAACAAACTGGAGGGTCCT
GTTCCGGAAAATGGCATGTTGAGAACAATCAATCCAGATGACCTGATTGGAAATGCCGGT
CTATGTGGTGGAGTGCTTCCTCCATGTTCTCATAATGCAGCATACACATCAAAGCAGAAG
AGCTTGCACGCGAAGCACATCATCACAGGATGGCTAACTGGTGTAGCAGCTCTTCTGCTT
TTTTTGACAGCAGGTCTTGTAGCTAGATCTCTATACAAGAGATGGCATGAAAATGGGAGC
TGCTTTGAACCAAGCTTTGAGATGAGCCGTGGTGAATGGCCATGGAGGTTGATGGCATTC
CAGAGGCTAGGATTCACTAGTAATGACATCTTGGCTTGCCTTAAAGAGTCAAATGTCATT
GGAATGGGAGCAACAGGGGTTGTATACAAAGCTGAAATGCAACGCGAGAATATGGTTGTT
GCAGTAAAGAAGCTGTGGAAATCTGGAACTGATATTGAGATGGGGCACAGTGATGATCTC
GTAGGTGAGGTGAATGTTCTTGGAAAATTGAGGCATCGAAATATTGTCAGGCTTCTGGGG
TTCCTTCACAACAAACGTGATGCAATGATACTATACGAGTATATGCAAAATGGTAGCCTT
GGAGAGGTTTTACATGGTAAACAAGCAGCAGGGAGACTGCTTGTTGATTGGGTCACTCGA
TATAACATAGCCCTTGGAGTGGCACAAGGCCTTGCTTATCTCCATCATTACTGCCATCCA
CCAGTTATTCACCGGGATGTCAAGTCAAATAACATACTTCTTGATGCAAATCTAGAGGCA
AGAATTGCAGATTTTGGTTTGGCAAGAACGATGCTCAAGAAGAATGAAACAGTTTCCATG
GTTGCTGGATCTTATGGATACATAGCCCCCGAGTACGGATACACGTTGAAAGTGGATGAG
AAGAGTGATATTTACAGCTATGGAGTTGTTCTCATGGAGCTCCTAACGGGTAAACGACCT
CTAGATCCTGAATTTGGGGAATCTGTTGACATTGTAGAGTGGTTTCGGATGAAGATCCGA
GACAACAAGTCTTTAGAAGAAGCACTTGACCCACATGTAGGAGCAACACAACATGTTCAA
GAAGAAATGTTGTTAGTTTTAAGGATAGCAATTCTATGTATAGCCAAACTCCCCAAGGAC
AGACCATCCATGAGGGATGTTTTGACGATGCTCGAAGAGGCAAAGCCTCGGAGAAAAAGC
AGTAGCAACAGTGGAGATAGCCATGATGCTACTACTAACAAAGATAAGCCAATATTCAGT
ACATCACCTGTAAATGGTCTTTTGTAA