Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022104
CDS Infomation

pacid=37457818 polypeptide=PGSC0003DMP400015064 locus=PGSC0003DMG400008575 ID=PGSC0003DMT400022104.v4.03 annot-version=v4.03
Sequence

ATGGAAGGGGAATTGAAGCCGATGGATGCAGAGCAACTGCGAGAGTATGGTCACAAGATG
GTAGATTTCATTGCTGATTACTACAAAAACATTGAGAATTTCCCCGTTCTCAGTCAAGTT
CAGCCTGGTTATCTTCATAAGCTTTTGCCTGAAACCGCACCTGCTCATTCTGAGACATTG
CAAGACGTTCTTGAAGATGTTCAAACAAAAATATTACCAGGGGTGACCCACTGGCAGAGC
CCAGATTACTTTGCATATTTTCCTTCAAATAGTAGTGTGGCTGGATTTTTGGGGGAAATG
CTCAGTGCCGGGATTAACATGGTGGGCTTTAGTTGGATAACTTCTCCAGCAGCGACAGAA
CTCGAAATGATCGTTCTGGATTGGCTTGCTAAAGCACTTAAGTTGCCTGATGAATTCCTT
TCAACAGGTCAAGGAGGTGGAGTGATACAGGGAACAGCAAGTGAAGCTGTTCTAGTTGTG
ATTTTAGCTGCTAGGGACAAGGTTCTGAGAAGAGTCGGAAAAGATGCAATTAGCAAACTT
GTGGTCTATTGTTCTGATCAAACTCATTCTTCTTTACAGAAAGCTTGCCAGATAGGAGGA
ATTTATCCTGAGAACTTTCGGGTGCTGAAAGCAGACCCATCCAGGGATTATGCTCTTTCT
CCTGATACACTTTCAGAAGCTGTATCACATGACATGGCCACTGGTTTAATACCTTTCTTC
TTTTGTTCTACTATTGGTACAACATCTTCAACTGCTGTGGATCCTTTGCTCGAACTGGGA
AAGATTGCCAAGAGTAATAGCATATGGTTTCATGTGGATGCGGCCTATGCTGGAAGTGCA
TGTATCTGTCCGGAATACCGGGGCTATATGAATGGTGTAGAGGAAGCTGATTCTTTCAAC
ATGAATGCACATAAGTGGTTCCTGACAAATTTTGACTGTTCCGCTCTCTGGGTCAAGGAC
CGGAGTGCACTCATCCAGTCACTGTCAACAAATCCCGAGTATCTCAAAAACAAAGCCTCT
CAAGAAAACTTGGTTGTGGATTACAAAGATTGGCAAGTTCCTCTTGGACGCAGGTTCAGA
TCACTGAAGCTGTGGATGGTATTGAGACTCTATGGGCTGGAAAAGCTTCAAGCTTACATA
AGAAATCATATAGAACTAGCAAAGCTATTTGAGGAACTTGTTGCTCAAGACAAGAGGTTT
GAGATTGTCACCCCTCGGAAGTTCTCATTGGTTTGTTTTCGCCTACTTCCACCCCCGAGT
AATGAAGATTATGCCAACAAACTGAACCATGACCTGCTAGATTCTGTCAACTCAACTGGG
AAACTATTTATTTCTCACACGCTTCTTTCAGATAGATACATACTGCGCTTTGCAGTAGGG
GCTCCACTGACAGAAGAGAGGCACATTGTTGGAGCTTGGAAAATTTTACAAGATGAGGCT
GCTACATTGTTAAGTAAATGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400015064
PEP Infomation

pacid=37457818 transcript=PGSC0003DMT400022104 locus=PGSC0003DMG400008575 ID=PGSC0003DMT400022104.v4.03 annot-version=v4.03
Sequence

MEGELKPMDAEQLREYGHKMVDFIADYYKNIENFPVLSQVQPGYLHKLLPETAPAHSETL
QDVLEDVQTKILPGVTHWQSPDYFAYFPSNSSVAGFLGEMLSAGINMVGFSWITSPAATE
LEMIVLDWLAKALKLPDEFLSTGQGGGVIQGTASEAVLVVILAARDKVLRRVGKDAISKL
VVYCSDQTHSSLQKACQIGGIYPENFRVLKADPSRDYALSPDTLSEAVSHDMATGLIPFF
FCSTIGTTSSTAVDPLLELGKIAKSNSIWFHVDAAYAGSACICPEYRGYMNGVEEADSFN
MNAHKWFLTNFDCSALWVKDRSALIQSLSTNPEYLKNKASQENLVVDYKDWQVPLGRRFR
SLKLWMVLRLYGLEKLQAYIRNHIELAKLFEELVAQDKRFEIVTPRKFSLVCFRLLPPPS
NEDYANKLNHDLLDSVNSTGKLFISHTLLSDRYILRFAVGAPLTEERHIVGAWKILQDEA
ATLLSKC*

Transcript Sequence

Transcript ID

PGSC0003DMT400022104
Transcript Infomation

pacid=37457818 locus=PGSC0003DMG400008575 ID=PGSC0003DMT400022104.v4.03 annot-version=v4.03
Sequence

ATGGAAGGGGAATTGAAGCCGATGGATGCAGAGCAACTGCGAGAGTATGGTCACAAGATG
GTAGATTTCATTGCTGATTACTACAAAAACATTGAGAATTTCCCCGTTCTCAGTCAAGTT
CAGCCTGGTTATCTTCATAAGCTTTTGCCTGAAACCGCACCTGCTCATTCTGAGACATTG
CAAGACGTTCTTGAAGATGTTCAAACAAAAATATTACCAGGGGTGACCCACTGGCAGAGC
CCAGATTACTTTGCATATTTTCCTTCAAATAGTAGTGTGGCTGGATTTTTGGGGGAAATG
CTCAGTGCCGGGATTAACATGGTGGGCTTTAGTTGGATAACTTCTCCAGCAGCGACAGAA
CTCGAAATGATCGTTCTGGATTGGCTTGCTAAAGCACTTAAGTTGCCTGATGAATTCCTT
TCAACAGGTCAAGGAGGTGGAGTGATACAGGGAACAGCAAGTGAAGCTGTTCTAGTTGTG
ATTTTAGCTGCTAGGGACAAGGTTCTGAGAAGAGTCGGAAAAGATGCAATTAGCAAACTT
GTGGTCTATTGTTCTGATCAAACTCATTCTTCTTTACAGAAAGCTTGCCAGATAGGAGGA
ATTTATCCTGAGAACTTTCGGGTGCTGAAAGCAGACCCATCCAGGGATTATGCTCTTTCT
CCTGATACACTTTCAGAAGCTGTATCACATGACATGGCCACTGGTTTAATACCTTTCTTC
TTTTGTTCTACTATTGGTACAACATCTTCAACTGCTGTGGATCCTTTGCTCGAACTGGGA
AAGATTGCCAAGAGTAATAGCATATGGTTTCATGTGGATGCGGCCTATGCTGGAAGTGCA
TGTATCTGTCCGGAATACCGGGGCTATATGAATGGTGTAGAGGAAGCTGATTCTTTCAAC
ATGAATGCACATAAGTGGTTCCTGACAAATTTTGACTGTTCCGCTCTCTGGGTCAAGGAC
CGGAGTGCACTCATCCAGTCACTGTCAACAAATCCCGAGTATCTCAAAAACAAAGCCTCT
CAAGAAAACTTGGTTGTGGATTACAAAGATTGGCAAGTTCCTCTTGGACGCAGGTTCAGA
TCACTGAAGCTGTGGATGGTATTGAGACTCTATGGGCTGGAAAAGCTTCAAGCTTACATA
AGAAATCATATAGAACTAGCAAAGCTATTTGAGGAACTTGTTGCTCAAGACAAGAGGTTT
GAGATTGTCACCCCTCGGAAGTTCTCATTGGTTTGTTTTCGCCTACTTCCACCCCCGAGT
AATGAAGATTATGCCAACAAACTGAACCATGACCTGCTAGATTCTGTCAACTCAACTGGG
AAACTATTTATTTCTCACACGCTTCTTTCAGATAGATACATACTGCGCTTTGCAGTAGGG
GCTCCACTGACAGAAGAGAGGCACATTGTTGGAGCTTGGAAAATTTTACAAGATGAGGCT
GCTACATTGTTAAGTAAATGTTAA