Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022039
CDS Infomation

pacid=37445895 polypeptide=PGSC0003DMP400015008 locus=PGSC0003DMG400008545 ID=PGSC0003DMT400022039.v4.03 annot-version=v4.03
Sequence

ATGTCAAGTGGTGGTTGTAGTATAGTATGGTTTAGGAGGGATCTGAGGCTTGAAGATAAT
CCAGCACTGGCCGCTGGAGTGAGAGCAGGATCAGTGATTGCTGTGTTTATATGGGCACCA
GAAGAAGAAGGATACTATTGTCCTGGAAGAGTGTCAAGATGGTGGATTAAGAAAAGTTTG
GCTCATCTTGATTCATCTTTGAAGAAACTTGGCACTTCACTCATTACAAAGAGATCTAAT
GATAGTGTTTCTTCTCTTCTTCAAGTTGTGAAATCTACCGGTGCAACTCGGGTTTTTTTC
AATCATTTATATGATCCGATATCACTTGTAAGGGATAATCGCGCAAAGGAAACCTTATCA
GCTGAAGGTGTATCTGTGTGTTCTTTCAATGCTGATTTGCTATATGAACCATGGGAAGTT
GTCGATGATGAAGGTCACCCATTCAGCACATTTTCTGATTTTTGGGAAAAATGTCTTACC
ATGCCTTATGATCCTGAAGCTCCACTTCTTCCACCTAAAAGGATAATATCTGGTGAGGCA
TCAAGATGCCCTTCAGATAACTTGGTGTTTGAGAGTGAATTAGAGAAAGGAAGCAATGCA
CTTCTTGCTCGAGCATGGTCTCCTGGTTGGAGCAATGCTGATAAGGCACTCACTACTTTC
ATTAATGGACCATTGATTGAGTATTCCAAGAATCGTAGTAAAGCTGATAGTGCAACAACC
TCATTTCTGTCACCGCGTTTACATTTTGGTGAAGTCAGTGTTCGTAAGGTATTCCATCGT
ATTCGTACTAAACAAACTCTCTGGGCTAATGAAGGAAACAAAGCAGGTGAAGAGAGTGTC
AACTTGTTCCTCAAGTCCATTGGCCTTAGGGAGTTCTCGAGATACATGAGCTTTTATCAT
CCTTACAGTCATGAAAGGCCATTGCTTGGTCAGCTAAAGTACTTTCCTTGGTTAGTAGAC
GAGGGTTATTTTAAGGCGTGGAGGCAAGGTAGAACAGGTTATCCGTTGGTTGATGCAGGT
ATGAGAGAGCTTTGGGCCACTGGCTGGCTACATGATCGTATTCGAGTTGTTGTGTCTAGT
TTCTCTGTTAAGGTTCTGCAGCTTCCTTGGACATGGGGAATGAAGTATTTCTGGGACACA
CTATTAGATGCAGATCTCGAGAGTGATGCTCTTGGTTGGCAATTTATTACCGGTACCCTA
CCTGATGGTTGTGAGTTCCTTGGAATTGATAATCCACAGTTTGAGGGATACAAGTTCGAT
CCAAATGGGGAATACGTTCGACGATGGCTTCCTGAACTTGTTAGGCTGCCCACTGAATGG
ATACACCATCCATGGGATGCACCAGAATCTGTACTTCAAGCTGCTGGCATTGAGCTTGGT
TCCAATTATCCTTTTCCCATCGTTGAAATCGTTGCAGCAAAAGAACGACTAGAAGAAGCA
TTATCGCAAATGTGGCAGCTTGAAGCAGCTGCAAGATCTGCTATTGAGAATGGAATGGAG
GAAGGACATGGAGACTCCACTGATGAGTTTGTCCCAATAGCTTTTCCTCAGGCTATGCAC
ATGGAAATGGAAGCTAATAATGTGCCGGTCAGGAACAATAATCCTACAATTACTGCTCTA
CGACGTTATGAAGATCAGATTGTTCCTAGCATGTCATCTTCCTTTTTTAGGAATGAAGAT
GAAGAAACCTCTGTTGATATTAGAAATTCAGTTGTGGATAGTAGAGCAGAAGTTCCAATA
ATATCGATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400015008
PEP Infomation

pacid=37445895 transcript=PGSC0003DMT400022039 locus=PGSC0003DMG400008545 ID=PGSC0003DMT400022039.v4.03 annot-version=v4.03
Sequence

MSSGGCSIVWFRRDLRLEDNPALAAGVRAGSVIAVFIWAPEEEGYYCPGRVSRWWIKKSL
AHLDSSLKKLGTSLITKRSNDSVSSLLQVVKSTGATRVFFNHLYDPISLVRDNRAKETLS
AEGVSVCSFNADLLYEPWEVVDDEGHPFSTFSDFWEKCLTMPYDPEAPLLPPKRIISGEA
SRCPSDNLVFESELEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRSKADSATT
SFLSPRLHFGEVSVRKVFHRIRTKQTLWANEGNKAGEESVNLFLKSIGLREFSRYMSFYH
PYSHERPLLGQLKYFPWLVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FSVKVLQLPWTWGMKYFWDTLLDADLESDALGWQFITGTLPDGCEFLGIDNPQFEGYKFD
PNGEYVRRWLPELVRLPTEWIHHPWDAPESVLQAAGIELGSNYPFPIVEIVAAKERLEEA
LSQMWQLEAAARSAIENGMEEGHGDSTDEFVPIAFPQAMHMEMEANNVPVRNNNPTITAL
RRYEDQIVPSMSSSFFRNEDEETSVDIRNSVVDSRAEVPIISM*

Transcript Sequence

Transcript ID

PGSC0003DMT400022039
Transcript Infomation

pacid=37445895 locus=PGSC0003DMG400008545 ID=PGSC0003DMT400022039.v4.03 annot-version=v4.03
Sequence

ATGTCAAGTGGTGGTTGTAGTATAGTATGGTTTAGGAGGGATCTGAGGCTTGAAGATAAT
CCAGCACTGGCCGCTGGAGTGAGAGCAGGATCAGTGATTGCTGTGTTTATATGGGCACCA
GAAGAAGAAGGATACTATTGTCCTGGAAGAGTGTCAAGATGGTGGATTAAGAAAAGTTTG
GCTCATCTTGATTCATCTTTGAAGAAACTTGGCACTTCACTCATTACAAAGAGATCTAAT
GATAGTGTTTCTTCTCTTCTTCAAGTTGTGAAATCTACCGGTGCAACTCGGGTTTTTTTC
AATCATTTATATGATCCGATATCACTTGTAAGGGATAATCGCGCAAAGGAAACCTTATCA
GCTGAAGGTGTATCTGTGTGTTCTTTCAATGCTGATTTGCTATATGAACCATGGGAAGTT
GTCGATGATGAAGGTCACCCATTCAGCACATTTTCTGATTTTTGGGAAAAATGTCTTACC
ATGCCTTATGATCCTGAAGCTCCACTTCTTCCACCTAAAAGGATAATATCTGGTGAGGCA
TCAAGATGCCCTTCAGATAACTTGGTGTTTGAGAGTGAATTAGAGAAAGGAAGCAATGCA
CTTCTTGCTCGAGCATGGTCTCCTGGTTGGAGCAATGCTGATAAGGCACTCACTACTTTC
ATTAATGGACCATTGATTGAGTATTCCAAGAATCGTAGTAAAGCTGATAGTGCAACAACC
TCATTTCTGTCACCGCGTTTACATTTTGGTGAAGTCAGTGTTCGTAAGGTATTCCATCGT
ATTCGTACTAAACAAACTCTCTGGGCTAATGAAGGAAACAAAGCAGGTGAAGAGAGTGTC
AACTTGTTCCTCAAGTCCATTGGCCTTAGGGAGTTCTCGAGATACATGAGCTTTTATCAT
CCTTACAGTCATGAAAGGCCATTGCTTGGTCAGCTAAAGTACTTTCCTTGGTTAGTAGAC
GAGGGTTATTTTAAGGCGTGGAGGCAAGGTAGAACAGGTTATCCGTTGGTTGATGCAGGT
ATGAGAGAGCTTTGGGCCACTGGCTGGCTACATGATCGTATTCGAGTTGTTGTGTCTAGT
TTCTCTGTTAAGGTTCTGCAGCTTCCTTGGACATGGGGAATGAAGTATTTCTGGGACACA
CTATTAGATGCAGATCTCGAGAGTGATGCTCTTGGTTGGCAATTTATTACCGGTACCCTA
CCTGATGGTTGTGAGTTCCTTGGAATTGATAATCCACAGTTTGAGGGATACAAGTTCGAT
CCAAATGGGGAATACGTTCGACGATGGCTTCCTGAACTTGTTAGGCTGCCCACTGAATGG
ATACACCATCCATGGGATGCACCAGAATCTGTACTTCAAGCTGCTGGCATTGAGCTTGGT
TCCAATTATCCTTTTCCCATCGTTGAAATCGTTGCAGCAAAAGAACGACTAGAAGAAGCA
TTATCGCAAATGTGGCAGCTTGAAGCAGCTGCAAGATCTGCTATTGAGAATGGAATGGAG
GAAGGACATGGAGACTCCACTGATGAGTTTGTCCCAATAGCTTTTCCTCAGGCTATGCAC
ATGGAAATGGAAGCTAATAATGTGCCGGTCAGGAACAATAATCCTACAATTACTGCTCTA
CGACGTTATGAAGATCAGATTGTTCCTAGCATGTCATCTTCCTTTTTTAGGAATGAAGAT
GAAGAAACCTCTGTTGATATTAGAAATTCAGTTGTGGATAGTAGAGCAGAAGTTCCAATA
ATATCGATGTAA