Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022016
CDS Infomation

pacid=37471573 polypeptide=PGSC0003DMP400014993 locus=PGSC0003DMG400008535 ID=PGSC0003DMT400022016.v4.03 annot-version=v4.03
Sequence

ATGCAGGCTCTCAGAGTGATCAAATATGCCGTCGGAAAATCTGGTGCAGAATTCAGAAGG
GAGATGCAAAGAAATTCAGTCGCTATACGCCAGTTAATTCACTACAAGGGTCAACCCGAT
CCTTTGAAGGCTGATGCACTCAATAAAGCAGTCCGTGAAACAGCACAGGAAGCATTATCT
GCTCTATTCTCTTCAGAAGACACTAAACCTCCTCCCACAGAAAATCTAAATCTTGGTGGT
AGGATACAAGGCTTTGGTAATACCAGCTATGAAATCGCATCAGCAGATGATAAGAGGTCT
TTCCTCAGTGACGTTGTTGGTATAGGAAGTGCTACAATTAAACAAGGACTTAACACTCTT
ACACAATCTCCATCCCTATCTCTCAAAAAGAATGATACTGGAAGTTACACAAGTCCAAAT
CTTCAGAGGTCATTGACAACTCAAGTTGACAGATATCAAGGGATTTCTTCTCACAATGAT
ACTTCTCGCTTTTCAAGAAATCCTGCTTCTGCAACTTGGACTCAAGATCTTCAACCATCT
CACACTGAAACAACAACCAAGCCAGATTCTGGTGAAAAGACCCGAGAAGAGAGGTTATTA
GAAACTATTGCAACGTCCGGTGGAGTTCGTCTGCAGCCAACTCGGGATGCACTTCAGGTT
TTCCTTCTGGAGGCATCAAAATTAGATGCCTTGGCTTTGACTCATGCCCTTGAGTCAAAA
CTGCAATCACCTTCGTGGCAGGTTCGTGTGAAAGCAATCTGTGTCCTTGAGGCTATCTTG
AGGAAAAAAGATGATGCTCACTTTGGTACTATGGCATCTTATTTCACTGAAAATAGAGAT
GTTGTGGTAAAATGCTCTGAATCTCCCCAAGCATCATTAAGAGAAAAAGCAAACAAAGTC
TTAAATCTTCTGAATGATGGACAAACAGCTGATGCTGTGGCTCATGTAGATAGGTCTGCG
AATGCTTGTAACCCTGCTGTCCAGATGCCTGACTTGATAGACGCAGACAATTCTGATTAT
CTGTTTGGATCAGATGATTTAGCAAATATGCAGAGTAGTGAAGGCATAAAAATTGCATCC
ACCTCTGCCACCCCTCTGATGGATGATCTATTTGGAGACAATTCGGGCAGCAGCTTTAGT
TCCGGCCAAAAGAAAAATGATGATGACCCCTTTGCTGATGTTTCTTTTCACACCAGTACT
GAGAAGGCGCCTGAAGCTGATCTCTTTTCTGGAATGACAGTTGACAAATCAGATGCTACT
GAAATCCATTCGGTGAATAATAGAAATGGACCTGAACTGTTTGATATCTTTGGTCCCAGT
GTTGAAGTTCCTCAGGAACCCAATAATTCTAGAAAGGATGTTCCTGATTTGATGAATAGT
CTCTCCTTGAATGGGAATGAGTCATCCATGAAGCAGAATGGCAGCTCAGGGGCAACCCCC
TATCAGAATATATTTCAAGAGCCCACTATTGATCCTCGTCATCAGGCTTCTAATGATGCC
ATGAACAGCATACTTTCCTCCCAGGCTGGTGGAGCTAATGCAAATTCCATGTTTCCTTTG
GGTGCTATGCAGTATAACTTGCTTCCTGGCTTCGTGTTGAATCCATCATTTGCTCCTCAG
GCTCTAAACTATAATGCTATGGGAAACATTTTTGCTCAGCAGCAACTCCTTGCAACGCTT
TCCAGTTACCAGCAATTAGGGAGCATGCACCCATCCACTAGTGCTAGTCATGCTGCTGAT
TCTGCGGAAGTTTATGGTTCAGCTCTCCCCGATATCTTCAATGCTAGCATTTCTAATCAA
ACTCCTACTTCCTTGATGAACACTTCGAAGAAAGAAGATACCAAGGCATTTGATTTTATC
TCGGATCATTTGGCTGCAGCTCGTGATCCAAAGAGGGTGATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400014993
PEP Infomation

pacid=37471573 transcript=PGSC0003DMT400022016 locus=PGSC0003DMG400008535 ID=PGSC0003DMT400022016.v4.03 annot-version=v4.03
Sequence

MQALRVIKYAVGKSGAEFRREMQRNSVAIRQLIHYKGQPDPLKADALNKAVRETAQEALS
ALFSSEDTKPPPTENLNLGGRIQGFGNTSYEIASADDKRSFLSDVVGIGSATIKQGLNTL
TQSPSLSLKKNDTGSYTSPNLQRSLTTQVDRYQGISSHNDTSRFSRNPASATWTQDLQPS
HTETTTKPDSGEKTREERLLETIATSGGVRLQPTRDALQVFLLEASKLDALALTHALESK
LQSPSWQVRVKAICVLEAILRKKDDAHFGTMASYFTENRDVVVKCSESPQASLREKANKV
LNLLNDGQTADAVAHVDRSANACNPAVQMPDLIDADNSDYLFGSDDLANMQSSEGIKIAS
TSATPLMDDLFGDNSGSSFSSGQKKNDDDPFADVSFHTSTEKAPEADLFSGMTVDKSDAT
EIHSVNNRNGPELFDIFGPSVEVPQEPNNSRKDVPDLMNSLSLNGNESSMKQNGSSGATP
YQNIFQEPTIDPRHQASNDAMNSILSSQAGGANANSMFPLGAMQYNLLPGFVLNPSFAPQ
ALNYNAMGNIFAQQQLLATLSSYQQLGSMHPSTSASHAADSAEVYGSALPDIFNASISNQ
TPTSLMNTSKKEDTKAFDFISDHLAAARDPKRVI*

Transcript Sequence

Transcript ID

PGSC0003DMT400022016
Transcript Infomation

pacid=37471573 locus=PGSC0003DMG400008535 ID=PGSC0003DMT400022016.v4.03 annot-version=v4.03
Sequence

ATGCAGGCTCTCAGAGTGATCAAATATGCCGTCGGAAAATCTGGTGCAGAATTCAGAAGG
GAGATGCAAAGAAATTCAGTCGCTATACGCCAGTTAATTCACTACAAGGGTCAACCCGAT
CCTTTGAAGGCTGATGCACTCAATAAAGCAGTCCGTGAAACAGCACAGGAAGCATTATCT
GCTCTATTCTCTTCAGAAGACACTAAACCTCCTCCCACAGAAAATCTAAATCTTGGTGGT
AGGATACAAGGCTTTGGTAATACCAGCTATGAAATCGCATCAGCAGATGATAAGAGGTCT
TTCCTCAGTGACGTTGTTGGTATAGGAAGTGCTACAATTAAACAAGGACTTAACACTCTT
ACACAATCTCCATCCCTATCTCTCAAAAAGAATGATACTGGAAGTTACACAAGTCCAAAT
CTTCAGAGGTCATTGACAACTCAAGTTGACAGATATCAAGGGATTTCTTCTCACAATGAT
ACTTCTCGCTTTTCAAGAAATCCTGCTTCTGCAACTTGGACTCAAGATCTTCAACCATCT
CACACTGAAACAACAACCAAGCCAGATTCTGGTGAAAAGACCCGAGAAGAGAGGTTATTA
GAAACTATTGCAACGTCCGGTGGAGTTCGTCTGCAGCCAACTCGGGATGCACTTCAGGTT
TTCCTTCTGGAGGCATCAAAATTAGATGCCTTGGCTTTGACTCATGCCCTTGAGTCAAAA
CTGCAATCACCTTCGTGGCAGGTTCGTGTGAAAGCAATCTGTGTCCTTGAGGCTATCTTG
AGGAAAAAAGATGATGCTCACTTTGGTACTATGGCATCTTATTTCACTGAAAATAGAGAT
GTTGTGGTAAAATGCTCTGAATCTCCCCAAGCATCATTAAGAGAAAAAGCAAACAAAGTC
TTAAATCTTCTGAATGATGGACAAACAGCTGATGCTGTGGCTCATGTAGATAGGTCTGCG
AATGCTTGTAACCCTGCTGTCCAGATGCCTGACTTGATAGACGCAGACAATTCTGATTAT
CTGTTTGGATCAGATGATTTAGCAAATATGCAGAGTAGTGAAGGCATAAAAATTGCATCC
ACCTCTGCCACCCCTCTGATGGATGATCTATTTGGAGACAATTCGGGCAGCAGCTTTAGT
TCCGGCCAAAAGAAAAATGATGATGACCCCTTTGCTGATGTTTCTTTTCACACCAGTACT
GAGAAGGCGCCTGAAGCTGATCTCTTTTCTGGAATGACAGTTGACAAATCAGATGCTACT
GAAATCCATTCGGTGAATAATAGAAATGGACCTGAACTGTTTGATATCTTTGGTCCCAGT
GTTGAAGTTCCTCAGGAACCCAATAATTCTAGAAAGGATGTTCCTGATTTGATGAATAGT
CTCTCCTTGAATGGGAATGAGTCATCCATGAAGCAGAATGGCAGCTCAGGGGCAACCCCC
TATCAGAATATATTTCAAGAGCCCACTATTGATCCTCGTCATCAGGCTTCTAATGATGCC
ATGAACAGCATACTTTCCTCCCAGGCTGGTGGAGCTAATGCAAATTCCATGTTTCCTTTG
GGTGCTATGCAGTATAACTTGCTTCCTGGCTTCGTGTTGAATCCATCATTTGCTCCTCAG
GCTCTAAACTATAATGCTATGGGAAACATTTTTGCTCAGCAGCAACTCCTTGCAACGCTT
TCCAGTTACCAGCAATTAGGGAGCATGCACCCATCCACTAGTGCTAGTCATGCTGCTGAT
TCTGCGGAAGTTTATGGTTCAGCTCTCCCCGATATCTTCAATGCTAGCATTTCTAATCAA
ACTCCTACTTCCTTGATGAACACTTCGAAGAAAGAAGATACCAAGGCATTTGATTTTATC
TCGGATCATTTGGCTGCAGCTCGTGATCCAAAGAGGGTGATTTGA