Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021901
CDS Infomation

pacid=37458210 polypeptide=PGSC0003DMP400014917 locus=PGSC0003DMG400008496 ID=PGSC0003DMT400021901.v4.03 annot-version=v4.03
Sequence

ATGGATGCACATACGGTTCATCTAGCGATGGCGGCACTAGTTGGAGCATCGATTGTAGCG
GTATCCGCCTACTATATGCACAGAAAAACCCTAAATCAGTTACTAGAGTTTGCAAAAGCC
ATAGAAAAGGATAGGGACCCTGATGACGTGGAAACGGAGGATGGCGGCGGCGGATACTCG
AGGAACTACGCTGTGAAGAGGCGGAACCGTAGCGGGAGTAAAGGGAGTAATGGATATTAT
CGCGGTTCTTCTGCTTCATTTCCGGATGTGATGATGGCAAAATCAGGTGAGGTTGAGGAA
AGGAGGAATGGTCCGATACATGTGGATTCTATTCCAGCCGGTTTACCCAGGCTTCATACT
CTTCCTGAAGGGAAATCAAGATCTACACATTCGCTTAGACCAACTTCTCCGAAGTCTCCA
GTTGCAAGTGCAAGTGCATTTGAAAGTATAGAAGGATCAGATGAGGAAGACAATATTACG
GGGACTACTAAACTTGACACTGCGTATCTACACACTAATGGGAATGCGGGCCCAGATGCT
GACGGGGAACAAATAGCTGTGGCTGCAGCAGCAAGTATGATTCGCTCACACAGTGTCTCT
GGTGACTTGCATGGTGTTCAACCTGATCCAATAGCTGCAGATATTCTACGGAAAGAGCCA
GAGCAAGAAACATTTGTACGACTGAAGATATCCCCTGGTGAGACACCATCTGCCGATGAA
GCGGAGGTCTACCGAAACTTGCAAGTTTGTCTTGAAATGAGACAGAGTTATGTATTCAAG
GAGGCTGTTGCTCCTTGGGTGAAGGAAGTAATCTCTGATCCATGCACCCCAAAGCCAAAT
CCAAATCCATTTGAATTTACTCCTGAAGGGAAATCTGATCATTATTTTCAGATGGAAGAT
GGAGTTGTTCATGTATATGCAAATGAAGATTCTACGGAGAAGCTTTTTCCTGTTGCTGAT
GCTACTACCTTTTTCACCGACTTCCATCACATCCTCAAAGTAATAGCAGCTGGGAACATC
CGAACTTTATGCCACCATCGCCTAGTGCTTCTGGAACAAAAATTCAATCTACATTTGATG
CTTAATGCGGATCGAGAGTTCCTTGCTCAGAAAAGTGCACCTCATCGTGACTTCTACAAT
GTGAGGAAGGTTGATACACATGTTCATCACTCAGCATGCATGAATCAGAAACATTTGTTG
AGATTTATCAAGTCAAAGTTGAGGAAGGAGCCTGATGAGGTTGTGATATTTCGCGATGGA
ACTTATATGACCTTAAAGGAAGTCTTTGAGAGCTTAGATTTGACTGGGTATGACCTCAAT
GTTGACCTGTTAGATGTTCATGCTGACAAAAGCACCTTTCATCGTTTTGACAAATTTAAT
CTGAAGTACAATCCCTGCGGTCAAAGTAGGCTGAGGGAAATTTTCCTTAAGCAGGATAAT
CTTATACAAGGTCGTTTTCTTGCTGAGCTGACTAAGCAAGTATTTTCTGATCTTTCTGCG
AGCAAATATCAAATGGCAGAATACAGGATATCAATATACGGCCGAAAGATGAGCGAGTGG
GACCAACTTGCTAGCTGGATAGTGAACAATGAACTGTACAGCGAGAATGTTGTCTGGTTG
ATTCAGCTTCCGAGACTGTATAACATATACAAAGAAATGGGGATTGTGACATCATTTCAA
AATATCCTTGACAACATCTTTCTGCCCTTGTTTGAGGTCACTGTTGACCCAGATTCACAT
CCCCACCTGCACATCTTCTTGAAGCAGGTTGTTGGATTGGATTTGGTGGATGATGAAAGC
AAACCAGAAAGAAGGCCTACCAAACACATGCCTACACCTGCTCAATGGACTAACGTATTC
AATCCTGCATTCTCATACTATGTCTACTATTGTTATGCTAATCTCTACACCCTGAACAAG
TTGCGTGAGTCAAAAGGCATGACGACCATCAAATTCCGGCCACATTCTGGGGAGGCTGGA
GATATTGACCACCTTGCCGCAACATTTTTAACATCCCATAATATTGCTCATGGTATCAAT
TTGAGAAAGTCTCCGGTTCTTCAATACTTATATTACTTGGCTCAGATTGGTTTGGCAATG
TCTCCTCTTAGTAACAATTCTTTATTTTTGGACTACCATCGGAATCCTTTGCCCATGTTC
TTCTTGAGGGGCCTGAATGTTTCTCTTTCAACGGATGATCCTTTGCAAATTCACTTAACA
AAAGAAGCCCTGGTTGAAGAGTATAGTATAGCTGCGTCAGTTTGGAAGTTGAGTGCATGT
GATTTATGTGAGATCGCCCGCAATTCAGTTTACCAGTCCGGTTTCTCACATGCGCTAAAG
TCCCACTGGATTGGGAAGGAGTATTACAAGAGAGGACCAGATGGAAATGATATTCATAGG
ACAAATGTGCCTCATATCAGGCTTGAATTCCGCGATATGATATGGAGGGAGGAGATGCAA
CAGGTTTATCTAGGCAAGGCTGTATTTCCTTCATTTGTTGACCCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400014917
PEP Infomation

pacid=37458210 transcript=PGSC0003DMT400021901 locus=PGSC0003DMG400008496 ID=PGSC0003DMT400021901.v4.03 annot-version=v4.03
Sequence

MDAHTVHLAMAALVGASIVAVSAYYMHRKTLNQLLEFAKAIEKDRDPDDVETEDGGGGYS
RNYAVKRRNRSGSKGSNGYYRGSSASFPDVMMAKSGEVEERRNGPIHVDSIPAGLPRLHT
LPEGKSRSTHSLRPTSPKSPVASASAFESIEGSDEEDNITGTTKLDTAYLHTNGNAGPDA
DGEQIAVAAAASMIRSHSVSGDLHGVQPDPIAADILRKEPEQETFVRLKISPGETPSADE
AEVYRNLQVCLEMRQSYVFKEAVAPWVKEVISDPCTPKPNPNPFEFTPEGKSDHYFQMED
GVVHVYANEDSTEKLFPVADATTFFTDFHHILKVIAAGNIRTLCHHRLVLLEQKFNLHLM
LNADREFLAQKSAPHRDFYNVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDG
TYMTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDN
LIQGRFLAELTKQVFSDLSASKYQMAEYRISIYGRKMSEWDQLASWIVNNELYSENVVWL
IQLPRLYNIYKEMGIVTSFQNILDNIFLPLFEVTVDPDSHPHLHIFLKQVVGLDLVDDES
KPERRPTKHMPTPAQWTNVFNPAFSYYVYYCYANLYTLNKLRESKGMTTIKFRPHSGEAG
DIDHLAATFLTSHNIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPLPMF
FLRGLNVSLSTDDPLQIHLTKEALVEEYSIAASVWKLSACDLCEIARNSVYQSGFSHALK
SHWIGKEYYKRGPDGNDIHRTNVPHIRLEFRDMIWREEMQQVYLGKAVFPSFVDP*

Transcript Sequence

Transcript ID

PGSC0003DMT400021901
Transcript Infomation

pacid=37458210 locus=PGSC0003DMG400008496 ID=PGSC0003DMT400021901.v4.03 annot-version=v4.03
Sequence

ATGGATGCACATACGGTTCATCTAGCGATGGCGGCACTAGTTGGAGCATCGATTGTAGCG
GTATCCGCCTACTATATGCACAGAAAAACCCTAAATCAGTTACTAGAGTTTGCAAAAGCC
ATAGAAAAGGATAGGGACCCTGATGACGTGGAAACGGAGGATGGCGGCGGCGGATACTCG
AGGAACTACGCTGTGAAGAGGCGGAACCGTAGCGGGAGTAAAGGGAGTAATGGATATTAT
CGCGGTTCTTCTGCTTCATTTCCGGATGTGATGATGGCAAAATCAGGTGAGGTTGAGGAA
AGGAGGAATGGTCCGATACATGTGGATTCTATTCCAGCCGGTTTACCCAGGCTTCATACT
CTTCCTGAAGGGAAATCAAGATCTACACATTCGCTTAGACCAACTTCTCCGAAGTCTCCA
GTTGCAAGTGCAAGTGCATTTGAAAGTATAGAAGGATCAGATGAGGAAGACAATATTACG
GGGACTACTAAACTTGACACTGCGTATCTACACACTAATGGGAATGCGGGCCCAGATGCT
GACGGGGAACAAATAGCTGTGGCTGCAGCAGCAAGTATGATTCGCTCACACAGTGTCTCT
GGTGACTTGCATGGTGTTCAACCTGATCCAATAGCTGCAGATATTCTACGGAAAGAGCCA
GAGCAAGAAACATTTGTACGACTGAAGATATCCCCTGGTGAGACACCATCTGCCGATGAA
GCGGAGGTCTACCGAAACTTGCAAGTTTGTCTTGAAATGAGACAGAGTTATGTATTCAAG
GAGGCTGTTGCTCCTTGGGTGAAGGAAGTAATCTCTGATCCATGCACCCCAAAGCCAAAT
CCAAATCCATTTGAATTTACTCCTGAAGGGAAATCTGATCATTATTTTCAGATGGAAGAT
GGAGTTGTTCATGTATATGCAAATGAAGATTCTACGGAGAAGCTTTTTCCTGTTGCTGAT
GCTACTACCTTTTTCACCGACTTCCATCACATCCTCAAAGTAATAGCAGCTGGGAACATC
CGAACTTTATGCCACCATCGCCTAGTGCTTCTGGAACAAAAATTCAATCTACATTTGATG
CTTAATGCGGATCGAGAGTTCCTTGCTCAGAAAAGTGCACCTCATCGTGACTTCTACAAT
GTGAGGAAGGTTGATACACATGTTCATCACTCAGCATGCATGAATCAGAAACATTTGTTG
AGATTTATCAAGTCAAAGTTGAGGAAGGAGCCTGATGAGGTTGTGATATTTCGCGATGGA
ACTTATATGACCTTAAAGGAAGTCTTTGAGAGCTTAGATTTGACTGGGTATGACCTCAAT
GTTGACCTGTTAGATGTTCATGCTGACAAAAGCACCTTTCATCGTTTTGACAAATTTAAT
CTGAAGTACAATCCCTGCGGTCAAAGTAGGCTGAGGGAAATTTTCCTTAAGCAGGATAAT
CTTATACAAGGTCGTTTTCTTGCTGAGCTGACTAAGCAAGTATTTTCTGATCTTTCTGCG
AGCAAATATCAAATGGCAGAATACAGGATATCAATATACGGCCGAAAGATGAGCGAGTGG
GACCAACTTGCTAGCTGGATAGTGAACAATGAACTGTACAGCGAGAATGTTGTCTGGTTG
ATTCAGCTTCCGAGACTGTATAACATATACAAAGAAATGGGGATTGTGACATCATTTCAA
AATATCCTTGACAACATCTTTCTGCCCTTGTTTGAGGTCACTGTTGACCCAGATTCACAT
CCCCACCTGCACATCTTCTTGAAGCAGGTTGTTGGATTGGATTTGGTGGATGATGAAAGC
AAACCAGAAAGAAGGCCTACCAAACACATGCCTACACCTGCTCAATGGACTAACGTATTC
AATCCTGCATTCTCATACTATGTCTACTATTGTTATGCTAATCTCTACACCCTGAACAAG
TTGCGTGAGTCAAAAGGCATGACGACCATCAAATTCCGGCCACATTCTGGGGAGGCTGGA
GATATTGACCACCTTGCCGCAACATTTTTAACATCCCATAATATTGCTCATGGTATCAAT
TTGAGAAAGTCTCCGGTTCTTCAATACTTATATTACTTGGCTCAGATTGGTTTGGCAATG
TCTCCTCTTAGTAACAATTCTTTATTTTTGGACTACCATCGGAATCCTTTGCCCATGTTC
TTCTTGAGGGGCCTGAATGTTTCTCTTTCAACGGATGATCCTTTGCAAATTCACTTAACA
AAAGAAGCCCTGGTTGAAGAGTATAGTATAGCTGCGTCAGTTTGGAAGTTGAGTGCATGT
GATTTATGTGAGATCGCCCGCAATTCAGTTTACCAGTCCGGTTTCTCACATGCGCTAAAG
TCCCACTGGATTGGGAAGGAGTATTACAAGAGAGGACCAGATGGAAATGATATTCATAGG
ACAAATGTGCCTCATATCAGGCTTGAATTCCGCGATATGATATGGAGGGAGGAGATGCAA
CAGGTTTATCTAGGCAAGGCTGTATTTCCTTCATTTGTTGACCCATGA