Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021880
CDS Infomation

pacid=37457238 polypeptide=PGSC0003DMP400014903 locus=PGSC0003DMG400008491 ID=PGSC0003DMT400021880.v4.03 annot-version=v4.03
Sequence

ATGGCTACATCAGTGCAATGCAGGCCACAAGAAAGGACTTTAGGAATGGTGATGAAGGAG
GTAGATGAAGATCTTGCAATGTTTCTTGAGATGCGACGTAGCGAAAAGGACATGAATGAT
CAACTTGCTAAATGTAACTCTGAGGAATTGGATCAGCAATTAGGCTCAGAGGTTGACTTC
TCTTCGTTATCAAATGGGACATCAACAAAGCCTGCTAATCAAGATTATCTTTTAAACTCT
GAGAATGACAAGAATGACTATGACTGGCTCCTTTCACCACCTCAGACTCCTTCAAATCCA
TTACCAGAGATGGAAGAACAGAATATTCCGGTGTACCAAATTGTGACAAATTCTAGTTCA
ACTGGTCAAGACTGTAAAATTAAGACAGATTTAAGTACAATTTCTCCTGAACCTAAAATA
AGCATTGAGCCGGACATAGTTCAGCCTGCAAATTCACTGGAAGGGCTCCATTCAATGGGA
CAGCCAGATATGTCCAGAAGCAAAAGCTCTTCTGCTGGAAATGGAAGGCCTTCTTCGTCA
GGGGGGAAAAAGGCAACTTCCACCAGGTCATCAACGCCTACTGGACGTCCTCGTAGTTCT
TCATCCAAGCCCTCAAGAGCTTCTACTCCTACTTCAAGAGCGACGTTGCCTTCTGCTAAG
CCTGTTGCTTCCACAGCAAGATCCTCAACTCCAACAAGAGCTGCTCCACGCTCTTCTACC
CCAACCGGTAGACCCTCCAAACCAGCTGCTTCCAAGTCAGCATCAAGGTCAGCAACACCA
ACTCGTCGACCATCAGCTGCATCGTCCATTCCTATTGTATCAGTTTCTGGTTCTCGATCT
TCTTCATCGACAAAAACGGGTTCCACGACATTGAAAAAAACTGCACCATCTCGGGGTACC
TCTCCAACTGTGAAGTCTAGGCCATTGAAACCCTTGGAGACACCAAGTCTTTCGCGTGAT
TCTTCTGTCAATTCTAAGACGTTAGTGCCTAAAAGGCCTGCATCTGCATCTAGAGGAAGA
CCAACTGCACCTGGCGCTCGATACTCTACTACTAATGGAAAACCCAGACGGAAATCATGT
TCTCCTTCTAGAGGACGAGCAACAACAGCTACTATTTTGAGCAATACAACTGCTCTGCTT
TCCAAGAGTAGGGGCTATGGTATTGAAAATGATGACGTGAATCCTGTGTTGATCGGCACA
CAGATGGTTGAAAGGGTAGTAAACATGAGGAAATTAGCTCCCCCAAAGCAAGATGATAAT
CTATCTCATGAAAATTCCTCCAAGAAATCTTTATCCCGAGAAAATTCAGGCTTTGGAAGA
TCATTCTCCAAAAAGTCTTTGGATATGGCTCTACGGCACATGGATATAAGACGAAGTGTT
AATGGAACCTTACGCCCAGTCCTGACACGGGTCTCAGCTTCTTCAGCAAACAGTATCCGT
TCTAGCTCAACAAAGAACAAGACAGGTAGTGTTTCTGACTCGCCCCTTGCCACGAGCAGC
AATGCTAGTTCAGAACCAAGTATGAACAATAGCTCTAATAACATAAATTGGAGTGAACCT
GAAGATGATAACTTTGGTTGTGAGAGAGAACTATCGTCCCCTCGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400014903
PEP Infomation

pacid=37457238 transcript=PGSC0003DMT400021880 locus=PGSC0003DMG400008491 ID=PGSC0003DMT400021880.v4.03 annot-version=v4.03
Sequence

MATSVQCRPQERTLGMVMKEVDEDLAMFLEMRRSEKDMNDQLAKCNSEELDQQLGSEVDF
SSLSNGTSTKPANQDYLLNSENDKNDYDWLLSPPQTPSNPLPEMEEQNIPVYQIVTNSSS
TGQDCKIKTDLSTISPEPKISIEPDIVQPANSLEGLHSMGQPDMSRSKSSSAGNGRPSSS
GGKKATSTRSSTPTGRPRSSSSKPSRASTPTSRATLPSAKPVASTARSSTPTRAAPRSST
PTGRPSKPAASKSASRSATPTRRPSAASSIPIVSVSGSRSSSSTKTGSTTLKKTAPSRGT
SPTVKSRPLKPLETPSLSRDSSVNSKTLVPKRPASASRGRPTAPGARYSTTNGKPRRKSC
SPSRGRATTATILSNTTALLSKSRGYGIENDDVNPVLIGTQMVERVVNMRKLAPPKQDDN
LSHENSSKKSLSRENSGFGRSFSKKSLDMALRHMDIRRSVNGTLRPVLTRVSASSANSIR
SSSTKNKTGSVSDSPLATSSNASSEPSMNNSSNNINWSEPEDDNFGCERELSSPR*

Transcript Sequence

Transcript ID

PGSC0003DMT400021880
Transcript Infomation

pacid=37457238 locus=PGSC0003DMG400008491 ID=PGSC0003DMT400021880.v4.03 annot-version=v4.03
Sequence

ATGGCTACATCAGTGCAATGCAGGCCACAAGAAAGGACTTTAGGAATGGTGATGAAGGAG
GTAGATGAAGATCTTGCAATGTTTCTTGAGATGCGACGTAGCGAAAAGGACATGAATGAT
CAACTTGCTAAATGTAACTCTGAGGAATTGGATCAGCAATTAGGCTCAGAGGTTGACTTC
TCTTCGTTATCAAATGGGACATCAACAAAGCCTGCTAATCAAGATTATCTTTTAAACTCT
GAGAATGACAAGAATGACTATGACTGGCTCCTTTCACCACCTCAGACTCCTTCAAATCCA
TTACCAGAGATGGAAGAACAGAATATTCCGGTGTACCAAATTGTGACAAATTCTAGTTCA
ACTGGTCAAGACTGTAAAATTAAGACAGATTTAAGTACAATTTCTCCTGAACCTAAAATA
AGCATTGAGCCGGACATAGTTCAGCCTGCAAATTCACTGGAAGGGCTCCATTCAATGGGA
CAGCCAGATATGTCCAGAAGCAAAAGCTCTTCTGCTGGAAATGGAAGGCCTTCTTCGTCA
GGGGGGAAAAAGGCAACTTCCACCAGGTCATCAACGCCTACTGGACGTCCTCGTAGTTCT
TCATCCAAGCCCTCAAGAGCTTCTACTCCTACTTCAAGAGCGACGTTGCCTTCTGCTAAG
CCTGTTGCTTCCACAGCAAGATCCTCAACTCCAACAAGAGCTGCTCCACGCTCTTCTACC
CCAACCGGTAGACCCTCCAAACCAGCTGCTTCCAAGTCAGCATCAAGGTCAGCAACACCA
ACTCGTCGACCATCAGCTGCATCGTCCATTCCTATTGTATCAGTTTCTGGTTCTCGATCT
TCTTCATCGACAAAAACGGGTTCCACGACATTGAAAAAAACTGCACCATCTCGGGGTACC
TCTCCAACTGTGAAGTCTAGGCCATTGAAACCCTTGGAGACACCAAGTCTTTCGCGTGAT
TCTTCTGTCAATTCTAAGACGTTAGTGCCTAAAAGGCCTGCATCTGCATCTAGAGGAAGA
CCAACTGCACCTGGCGCTCGATACTCTACTACTAATGGAAAACCCAGACGGAAATCATGT
TCTCCTTCTAGAGGACGAGCAACAACAGCTACTATTTTGAGCAATACAACTGCTCTGCTT
TCCAAGAGTAGGGGCTATGGTATTGAAAATGATGACGTGAATCCTGTGTTGATCGGCACA
CAGATGGTTGAAAGGGTAGTAAACATGAGGAAATTAGCTCCCCCAAAGCAAGATGATAAT
CTATCTCATGAAAATTCCTCCAAGAAATCTTTATCCCGAGAAAATTCAGGCTTTGGAAGA
TCATTCTCCAAAAAGTCTTTGGATATGGCTCTACGGCACATGGATATAAGACGAAGTGTT
AATGGAACCTTACGCCCAGTCCTGACACGGGTCTCAGCTTCTTCAGCAAACAGTATCCGT
TCTAGCTCAACAAAGAACAAGACAGGTAGTGTTTCTGACTCGCCCCTTGCCACGAGCAGC
AATGCTAGTTCAGAACCAAGTATGAACAATAGCTCTAATAACATAAATTGGAGTGAACCT
GAAGATGATAACTTTGGTTGTGAGAGAGAACTATCGTCCCCTCGCTGA