Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021841
CDS Infomation

pacid=37462851 polypeptide=PGSC0003DMP400014873 locus=PGSC0003DMG400008477 ID=PGSC0003DMT400021841.v4.03 annot-version=v4.03
Sequence

ATGGCCGTTCCAAGCAGTGCTAGGGCATTTCCGTCCTTCCAATGCCGTTCCGATCCCGAC
TTCTCCGGCGGCGTTCCACGTCATGACCTCCCTAACGCCGGCGTTCGTTTTTCAGTTAAG
GTCAAGTCGTTGAGTCGTGGATCTTCGGTTCACGGTATGTCTTCTCTGATCCTTCGCTTC
CCGCCCAACTTCGTAAGGCAGCTCAGCGTTAAAGCTCGTAGGAACTGCAGTAACATCGGT
TTAGCACAAGTTGTTGCGGCTTCCTGGTCTAATAACCACGCTTCTCCTGACTTTACTCCG
GCGGCTAAGGCCGTAGATGCCGCCTCCATTGCTCCTTTTGATATTACCACAGGTGATGAG
GAGGGGGCGGTGGTGGAAGATTCGCCTCGTGCTGATCGAAATGTACAGATTGAGGATTTG
ACAGATGTCAAATATTCTTCATTTTTGAGTTCTGATGGGAGCATCGCAATTCATGCCGGT
GAAAGGTTAGGACGTGGTATTGTTACTGATGCAATAACTACCCCAGTGGTTAACACATCT
GCTTATTTCTTCAAGAAGACTTCTGACCTTATTGACTTCAAGGAGAAAAAACGTGCGAGT
TTTGAATATGGGCGCTATGGGAACCCCACTAGTATTGTTGCAGAGGAAAAGATAAGTGCA
CTGGAGGGTGCTGATGCAACCTTGTTAATGGCATCTGGAATGTGTGCTAGTACTGTATTG
TTGTTGGCATTGGTTCCTGCTGGTGGGCATATTGTAACAACAACAGACTGCTATAGGAAG
ACCCGGATATTTATTGAGACAATACTGCCTAAAATGGGAATCACGGCGACAGTCATTGAC
CCAGCTGATATTGGAGCTCTAGAGTCTGTGCTAAATCAGAAGAAAGTGACTCTTTTCTTT
ACCGAGTCTCCAACAAATCCATTCCTGAGATGTGTTGACATTGAGCTTGTTTCGAAGCTT
TGCCATGAAAAAGGAGCATTAGTTTGCATAGATGGGACGTTTGCAACTCCCCTTAACCAA
AAGGTCCTTGCTCTAGGGGCTGACCTCGTTGTGCACTCTGCAACAAAATATCTTGGTGGC
CACAATGATGTTCTTGGAGGTTGCATCAGTGGTCCTGATAAGTTAGTTTCAGCAGTTCGT
ACCTTGCATCATATCCTGGGTGGTGCTATCAATCCTAATGCTGCGTATTTAATCATCAGA
GGCATGAAGACGTTGCATCTCCGTGTACAGCAACAGAACTCAACTGCACAAAGGATAGCC
GAAATTTTAGAGGCTCATCCAAAGGTGAGGTGTGTCTATTATCCAGGCTTGCCAAGTCAT
CCAGAATACCATCTTGCAAAGAGACAAATGACTGGTTTTGGTGGGGTGGTCAGTTTTGAG
GTTGATGGGGATCTGCTAACTACTGCAAAATTTGTTGATGCTCTAAAAATTCCTTATATT
GCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATTATGTCTTACTGG
GATCTTAAGGAGTCAGAGAGAGCTAAGTATGGGATCATGGACAACTTGGTTCGATTCAGC
TTTGGAGTAGAAGACTTTGAAGACTTGAAAGCTGATATTCTTCAGGCGCTGGAGTCCATG
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400014873
PEP Infomation

pacid=37462851 transcript=PGSC0003DMT400021841 locus=PGSC0003DMG400008477 ID=PGSC0003DMT400021841.v4.03 annot-version=v4.03
Sequence

MAVPSSARAFPSFQCRSDPDFSGGVPRHDLPNAGVRFSVKVKSLSRGSSVHGMSSLILRF
PPNFVRQLSVKARRNCSNIGLAQVVAASWSNNHASPDFTPAAKAVDAASIAPFDITTGDE
EGAVVEDSPRADRNVQIEDLTDVKYSSFLSSDGSIAIHAGERLGRGIVTDAITTPVVNTS
AYFFKKTSDLIDFKEKKRASFEYGRYGNPTSIVAEEKISALEGADATLLMASGMCASTVL
LLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADIGALESVLNQKKVTLFF
TESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKVLALGADLVVHSATKYLGG
HNDVLGGCISGPDKLVSAVRTLHHILGGAINPNAAYLIIRGMKTLHLRVQQQNSTAQRIA
EILEAHPKVRCVYYPGLPSHPEYHLAKRQMTGFGGVVSFEVDGDLLTTAKFVDALKIPYI
APSFGGCESIVDQPAIMSYWDLKESERAKYGIMDNLVRFSFGVEDFEDLKADILQALESM
*

Transcript Sequence

Transcript ID

PGSC0003DMT400021841
Transcript Infomation

pacid=37462851 locus=PGSC0003DMG400008477 ID=PGSC0003DMT400021841.v4.03 annot-version=v4.03
Sequence

ATGGCCGTTCCAAGCAGTGCTAGGGCATTTCCGTCCTTCCAATGCCGTTCCGATCCCGAC
TTCTCCGGCGGCGTTCCACGTCATGACCTCCCTAACGCCGGCGTTCGTTTTTCAGTTAAG
GTCAAGTCGTTGAGTCGTGGATCTTCGGTTCACGGTATGTCTTCTCTGATCCTTCGCTTC
CCGCCCAACTTCGTAAGGCAGCTCAGCGTTAAAGCTCGTAGGAACTGCAGTAACATCGGT
TTAGCACAAGTTGTTGCGGCTTCCTGGTCTAATAACCACGCTTCTCCTGACTTTACTCCG
GCGGCTAAGGCCGTAGATGCCGCCTCCATTGCTCCTTTTGATATTACCACAGGTGATGAG
GAGGGGGCGGTGGTGGAAGATTCGCCTCGTGCTGATCGAAATGTACAGATTGAGGATTTG
ACAGATGTCAAATATTCTTCATTTTTGAGTTCTGATGGGAGCATCGCAATTCATGCCGGT
GAAAGGTTAGGACGTGGTATTGTTACTGATGCAATAACTACCCCAGTGGTTAACACATCT
GCTTATTTCTTCAAGAAGACTTCTGACCTTATTGACTTCAAGGAGAAAAAACGTGCGAGT
TTTGAATATGGGCGCTATGGGAACCCCACTAGTATTGTTGCAGAGGAAAAGATAAGTGCA
CTGGAGGGTGCTGATGCAACCTTGTTAATGGCATCTGGAATGTGTGCTAGTACTGTATTG
TTGTTGGCATTGGTTCCTGCTGGTGGGCATATTGTAACAACAACAGACTGCTATAGGAAG
ACCCGGATATTTATTGAGACAATACTGCCTAAAATGGGAATCACGGCGACAGTCATTGAC
CCAGCTGATATTGGAGCTCTAGAGTCTGTGCTAAATCAGAAGAAAGTGACTCTTTTCTTT
ACCGAGTCTCCAACAAATCCATTCCTGAGATGTGTTGACATTGAGCTTGTTTCGAAGCTT
TGCCATGAAAAAGGAGCATTAGTTTGCATAGATGGGACGTTTGCAACTCCCCTTAACCAA
AAGGTCCTTGCTCTAGGGGCTGACCTCGTTGTGCACTCTGCAACAAAATATCTTGGTGGC
CACAATGATGTTCTTGGAGGTTGCATCAGTGGTCCTGATAAGTTAGTTTCAGCAGTTCGT
ACCTTGCATCATATCCTGGGTGGTGCTATCAATCCTAATGCTGCGTATTTAATCATCAGA
GGCATGAAGACGTTGCATCTCCGTGTACAGCAACAGAACTCAACTGCACAAAGGATAGCC
GAAATTTTAGAGGCTCATCCAAAGGTGAGGTGTGTCTATTATCCAGGCTTGCCAAGTCAT
CCAGAATACCATCTTGCAAAGAGACAAATGACTGGTTTTGGTGGGGTGGTCAGTTTTGAG
GTTGATGGGGATCTGCTAACTACTGCAAAATTTGTTGATGCTCTAAAAATTCCTTATATT
GCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATTATGTCTTACTGG
GATCTTAAGGAGTCAGAGAGAGCTAAGTATGGGATCATGGACAACTTGGTTCGATTCAGC
TTTGGAGTAGAAGACTTTGAAGACTTGAAAGCTGATATTCTTCAGGCGCTGGAGTCCATG
TAG