Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021785
CDS Infomation

pacid=37444101 polypeptide=PGSC0003DMP400014833 locus=PGSC0003DMG400008454 ID=PGSC0003DMT400021785.v4.03 annot-version=v4.03
Sequence

ATGGGTCGCTCTCGTGGTAATTTTCAAGCTGATGAAGATCCCAGCCAAAGATCAAGGAGG
AAAAAGAATGCCTCAAGTGGAGACAATTTAGAAACTGTGACCACTGGTCAAGGGACAGCT
GATGGCAAAAGGGCCTTGTATCACTGCAATTATTGCAACAAAGACATTAGTGGGAGAACT
CGTATAAAATGTGCTGTATGTTCCGATTTTGACCTATGTATAGAGTGCTTCTCTGTTGGT
GCTGAGGTACATCCTCACAAAAGCCATCACCACTATAGGGTTATGGACATCTTAGCTTTC
CCGCTTATTTGCCCAGACTGGAATGCTGATGAAGAGATGTTGCTTCTTGAGGGAATTGAG
ATGTATGGCATGGGTAATTGGGCTGAAGTAGGTGAGCATGTAGGAACAAAGACAAAAGAA
GTCTGCATTGACCATTTTAAGGCCGCATACTTAGAGTCACCTTACTTTCCTCTACCGGAT
ATGACTCACGTCATGGGGAAAAACAGAATGGAACTCATTGCCATGGCTAAAGGGAATTTT
GCAGATAAGAAAGGACTCTCTTCACTTGGTGAAGATGTTCCTAAAGATGAATCATTCTGT
CCGTCTCGAATCAAAGTTGAAGACACTCATAAAATTGGTCCATCAGGACGTTTAACTTCT
GTATCCAATGCGGGAATCACAGGCATAAAAAAGCCATCCAGCAAAACGCAAATCAAAGAT
CAAAATGAACCTGTTAAATTTGAAGATAATTCAGGCAGAAATTTTGGAGGCAAGAAACCG
AAATCTTTGAAGGATGATGGATCCTCATTGATGAAATTAAGTGGATATATTCCCAAGAGG
CAAGAATTTGATCCTGAATATGATAATGATGCGGAGCAACTATTGGCTGATATGGAATTC
AAGGAAACTGAAACTGAAGAGGAGCGCGAACTTAAGTTGCGTGTTCTGCGTATCTATTCC
AAGAGGCTTGATGAAAGAAAGCGCCGCAAGGATTTTATTCTAGAGAGGAATTTACTCCAG
CCAAGTGAATTTGAGAAGAATTTGTCACCAGAAGAGAAAGATATATGCCGACGTTATGAT
GCCATTATGCGCTTTCTATCGAAGGAGGAGCATGAAGAATTACTAAAGACTGTGATCTCA
GAACATAGATATCTGAAAAGAATACAAGAACTCAAGGAAGCGAAAGCTGCTGGTTGTCGT
TCGTCTGCCGAAGTTGATAGATACTTAGAAAGGAAAAGGAAGAAGGAAGTTGAAGAAGGT
GTTCCGAGAAAAGGAAGTTCTCAGATTGGCCCAGTGATCCAGGAAAGCCTGAACATACCT
GCTTCTTCTGAGTCACTTGGAATACATTCAAATAGAAAACCTTGTAGCCAGGCGATTTTG
AGTTCCGACACCGATTCAGGTGTTCCAGCTTTTTCTGCAGGAGAACTGTTATCTGAACCA
GAGAAACAACTATGCCGAGAAATCAGGTTATCGCCGCATCATTATCTTAGGATGCAGGAG
GTCCTTACAGTTCAAATTTATAGTGGCAATATCACTAGAAAATCAGATGCTTATCCCTTG
TTTCAAATAGAAGCAACTAACGTAGATAGAGTTTATGATATGCTTTTGAAGAAAGGAGTT
GCACCCTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400014833
PEP Infomation

pacid=37444101 transcript=PGSC0003DMT400021785 locus=PGSC0003DMG400008454 ID=PGSC0003DMT400021785.v4.03 annot-version=v4.03
Sequence

MGRSRGNFQADEDPSQRSRRKKNASSGDNLETVTTGQGTADGKRALYHCNYCNKDISGRT
RIKCAVCSDFDLCIECFSVGAEVHPHKSHHHYRVMDILAFPLICPDWNADEEMLLLEGIE
MYGMGNWAEVGEHVGTKTKEVCIDHFKAAYLESPYFPLPDMTHVMGKNRMELIAMAKGNF
ADKKGLSSLGEDVPKDESFCPSRIKVEDTHKIGPSGRLTSVSNAGITGIKKPSSKTQIKD
QNEPVKFEDNSGRNFGGKKPKSLKDDGSSLMKLSGYIPKRQEFDPEYDNDAEQLLADMEF
KETETEEERELKLRVLRIYSKRLDERKRRKDFILERNLLQPSEFEKNLSPEEKDICRRYD
AIMRFLSKEEHEELLKTVISEHRYLKRIQELKEAKAAGCRSSAEVDRYLERKRKKEVEEG
VPRKGSSQIGPVIQESLNIPASSESLGIHSNRKPCSQAILSSDTDSGVPAFSAGELLSEP
EKQLCREIRLSPHHYLRMQEVLTVQIYSGNITRKSDAYPLFQIEATNVDRVYDMLLKKGV
APL*

Transcript Sequence

Transcript ID

PGSC0003DMT400021785
Transcript Infomation

pacid=37444101 locus=PGSC0003DMG400008454 ID=PGSC0003DMT400021785.v4.03 annot-version=v4.03
Sequence

ATGGGTCGCTCTCGTGGTAATTTTCAAGCTGATGAAGATCCCAGCCAAAGATCAAGGAGG
AAAAAGAATGCCTCAAGTGGAGACAATTTAGAAACTGTGACCACTGGTCAAGGGACAGCT
GATGGCAAAAGGGCCTTGTATCACTGCAATTATTGCAACAAAGACATTAGTGGGAGAACT
CGTATAAAATGTGCTGTATGTTCCGATTTTGACCTATGTATAGAGTGCTTCTCTGTTGGT
GCTGAGGTACATCCTCACAAAAGCCATCACCACTATAGGGTTATGGACATCTTAGCTTTC
CCGCTTATTTGCCCAGACTGGAATGCTGATGAAGAGATGTTGCTTCTTGAGGGAATTGAG
ATGTATGGCATGGGTAATTGGGCTGAAGTAGGTGAGCATGTAGGAACAAAGACAAAAGAA
GTCTGCATTGACCATTTTAAGGCCGCATACTTAGAGTCACCTTACTTTCCTCTACCGGAT
ATGACTCACGTCATGGGGAAAAACAGAATGGAACTCATTGCCATGGCTAAAGGGAATTTT
GCAGATAAGAAAGGACTCTCTTCACTTGGTGAAGATGTTCCTAAAGATGAATCATTCTGT
CCGTCTCGAATCAAAGTTGAAGACACTCATAAAATTGGTCCATCAGGACGTTTAACTTCT
GTATCCAATGCGGGAATCACAGGCATAAAAAAGCCATCCAGCAAAACGCAAATCAAAGAT
CAAAATGAACCTGTTAAATTTGAAGATAATTCAGGCAGAAATTTTGGAGGCAAGAAACCG
AAATCTTTGAAGGATGATGGATCCTCATTGATGAAATTAAGTGGATATATTCCCAAGAGG
CAAGAATTTGATCCTGAATATGATAATGATGCGGAGCAACTATTGGCTGATATGGAATTC
AAGGAAACTGAAACTGAAGAGGAGCGCGAACTTAAGTTGCGTGTTCTGCGTATCTATTCC
AAGAGGCTTGATGAAAGAAAGCGCCGCAAGGATTTTATTCTAGAGAGGAATTTACTCCAG
CCAAGTGAATTTGAGAAGAATTTGTCACCAGAAGAGAAAGATATATGCCGACGTTATGAT
GCCATTATGCGCTTTCTATCGAAGGAGGAGCATGAAGAATTACTAAAGACTGTGATCTCA
GAACATAGATATCTGAAAAGAATACAAGAACTCAAGGAAGCGAAAGCTGCTGGTTGTCGT
TCGTCTGCCGAAGTTGATAGATACTTAGAAAGGAAAAGGAAGAAGGAAGTTGAAGAAGGT
GTTCCGAGAAAAGGAAGTTCTCAGATTGGCCCAGTGATCCAGGAAAGCCTGAACATACCT
GCTTCTTCTGAGTCACTTGGAATACATTCAAATAGAAAACCTTGTAGCCAGGCGATTTTG
AGTTCCGACACCGATTCAGGTGTTCCAGCTTTTTCTGCAGGAGAACTGTTATCTGAACCA
GAGAAACAACTATGCCGAGAAATCAGGTTATCGCCGCATCATTATCTTAGGATGCAGGAG
GTCCTTACAGTTCAAATTTATAGTGGCAATATCACTAGAAAATCAGATGCTTATCCCTTG
TTTCAAATAGAAGCAACTAACGTAGATAGAGTTTATGATATGCTTTTGAAGAAAGGAGTT
GCACCCTTGTAA