Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021748
CDS Infomation

pacid=37443415 polypeptide=PGSC0003DMP400014817 locus=PGSC0003DMG400008442 ID=PGSC0003DMT400021748.v4.03 annot-version=v4.03
Sequence

ATGCACACATCCCAGATACCTCAATCATCGGGCGGAGTTCACAAGTTGTGCCATCAGCCA
ACGACAAACTTTGAGCAATATTATAGCCCTTACCATGTAGTTAACAACAATTCCAGTGAT
ACTAGCAGCTCGGGGACACAGCTCTCTTATCAGACACAGAATGAAAAGTTTTTCACTCTG
GACTCACTGCCTGATGCTGGTTATGTCAGCTATGATTCGCCTCCTGCTGTTAGTGTCTCG
TCCAACTGGAGTCCGTTCTCTCCTCAGTGTTCTCAGTCGTACATCTCGGATCAGCACCAT
TCCTCAGACAACACTTATGGTTCACCTTTGAGCGGGTGTTCAGTAATTAATGATGGCAAT
GAACTGAAGCATGTGCTAAGGGAGATGGCGAATAATTTGCTAGGGCCTGGTTCTGATATT
GATGAAGACAGCAGTTGCTCTTTCAATGGTGAGGTCTCAAAACCTTCAAAGTGGAATCGA
GTATTGGAAATTGCACCGAGCTTGGACATGAAAGAGCTGCTTCTTGCCTGTGCTGAAGCA
ATATCGGATGTCGAAGTCACAGCTAGAGATGCTCAGATGAATGTCTTAGGGCAAAAGGTA
TCGGATGCTGATGTCACAGCTAGAGATGTTCTGATAAATGTCTTAGAGCAAAAGGTATCG
GTTTCCGGGGAACCTATGCAACGATTAAGCGCATACATGTTGGAAGGACTCAAAGCAAGA
ATATATTCTTCGGGAAGTACCATATACAAAATGCTCAAGTGCAAGGAACCAACTGGTTCA
GAATTGATCTCTTACATGCAAGTCCTCTATCACATCTGCCCCTACTACAGATTCGCTTAC
ACATCCGCCAATGTTGTGATTGAAGAAGCCATGAGAAATGAGAGCAGAATCCATATAATA
GATTTTCAAATTGCACAGGGAAGTCAATGGGTGTTCCTTATGCAAAATCTTGCTCATTGG
CCTGGTGGACCCCCTTCTGTCCACATCACAGGTGTTGATGATTCCCAATCAGCTCATGCA
CGCGGTGGTGGACTTCACCTAGTAGGTGAAAGGCTAGCAAAAGCTGCTGAATCATGTGGA
GTGCCTTTTGAATTCCATGCTGCTGCTATATCGGGCTGTGAGGTTCAGCTAGAAAACCTT
CAAATTAGACATGGAGAAGCCTTGGCAGTTAACTTCCCGTACGTGCTGCACCACATGCCA
GACGAGAGTGTAACCACTGCAAACCATCGAGACCGTCTACTCAGACTGGTCAAGAGCTTG
TCCCCGAAAATAGTCACCCTTGTCGAACAAGAATCTAACACCAACACTTCTGCTTTCCTT
CCAAGATTCCGTGAAACTCTGGATTACTACACCGCAATGTTCGAGTCAATTGATGCAGGT
CGCCCGGGGGATGACAAGCAAAGGATCAACGCAGAGGCGCATTGTGTGGCACGAGACATT
GTCAACATAATAGCATGTGAGGGGTCCGACAGAGTGGAAAGACACGAAGTTTTTGGAAAG
TGGAGTATGAGACTTACAATGGCTGGATTTACTCCATGCCCTTTGAGTCCATCAGTTGGT
GAAGCCATCAACGGTGTGTTGAAAGAGTTTAGCCCAAATTATCGAATTGCAGAGAACAAA
GGCGCGCTTTATCTTGGATGGAAGAACAGAGCTTTAGCGACTTCTTCAGCTTGGAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400014817
PEP Infomation

pacid=37443415 transcript=PGSC0003DMT400021748 locus=PGSC0003DMG400008442 ID=PGSC0003DMT400021748.v4.03 annot-version=v4.03
Sequence

MHTSQIPQSSGGVHKLCHQPTTNFEQYYSPYHVVNNNSSDTSSSGTQLSYQTQNEKFFTL
DSLPDAGYVSYDSPPAVSVSSNWSPFSPQCSQSYISDQHHSSDNTYGSPLSGCSVINDGN
ELKHVLREMANNLLGPGSDIDEDSSCSFNGEVSKPSKWNRVLEIAPSLDMKELLLACAEA
ISDVEVTARDAQMNVLGQKVSDADVTARDVLINVLEQKVSVSGEPMQRLSAYMLEGLKAR
IYSSGSTIYKMLKCKEPTGSELISYMQVLYHICPYYRFAYTSANVVIEEAMRNESRIHII
DFQIAQGSQWVFLMQNLAHWPGGPPSVHITGVDDSQSAHARGGGLHLVGERLAKAAESCG
VPFEFHAAAISGCEVQLENLQIRHGEALAVNFPYVLHHMPDESVTTANHRDRLLRLVKSL
SPKIVTLVEQESNTNTSAFLPRFRETLDYYTAMFESIDAGRPGDDKQRINAEAHCVARDI
VNIIACEGSDRVERHEVFGKWSMRLTMAGFTPCPLSPSVGEAINGVLKEFSPNYRIAENK
GALYLGWKNRALATSSAWR*

Transcript Sequence

Transcript ID

PGSC0003DMT400021748
Transcript Infomation

pacid=37443415 locus=PGSC0003DMG400008442 ID=PGSC0003DMT400021748.v4.03 annot-version=v4.03
Sequence

ATGCACACATCCCAGATACCTCAATCATCGGGCGGAGTTCACAAGTTGTGCCATCAGCCA
ACGACAAACTTTGAGCAATATTATAGCCCTTACCATGTAGTTAACAACAATTCCAGTGAT
ACTAGCAGCTCGGGGACACAGCTCTCTTATCAGACACAGAATGAAAAGTTTTTCACTCTG
GACTCACTGCCTGATGCTGGTTATGTCAGCTATGATTCGCCTCCTGCTGTTAGTGTCTCG
TCCAACTGGAGTCCGTTCTCTCCTCAGTGTTCTCAGTCGTACATCTCGGATCAGCACCAT
TCCTCAGACAACACTTATGGTTCACCTTTGAGCGGGTGTTCAGTAATTAATGATGGCAAT
GAACTGAAGCATGTGCTAAGGGAGATGGCGAATAATTTGCTAGGGCCTGGTTCTGATATT
GATGAAGACAGCAGTTGCTCTTTCAATGGTGAGGTCTCAAAACCTTCAAAGTGGAATCGA
GTATTGGAAATTGCACCGAGCTTGGACATGAAAGAGCTGCTTCTTGCCTGTGCTGAAGCA
ATATCGGATGTCGAAGTCACAGCTAGAGATGCTCAGATGAATGTCTTAGGGCAAAAGGTA
TCGGATGCTGATGTCACAGCTAGAGATGTTCTGATAAATGTCTTAGAGCAAAAGGTATCG
GTTTCCGGGGAACCTATGCAACGATTAAGCGCATACATGTTGGAAGGACTCAAAGCAAGA
ATATATTCTTCGGGAAGTACCATATACAAAATGCTCAAGTGCAAGGAACCAACTGGTTCA
GAATTGATCTCTTACATGCAAGTCCTCTATCACATCTGCCCCTACTACAGATTCGCTTAC
ACATCCGCCAATGTTGTGATTGAAGAAGCCATGAGAAATGAGAGCAGAATCCATATAATA
GATTTTCAAATTGCACAGGGAAGTCAATGGGTGTTCCTTATGCAAAATCTTGCTCATTGG
CCTGGTGGACCCCCTTCTGTCCACATCACAGGTGTTGATGATTCCCAATCAGCTCATGCA
CGCGGTGGTGGACTTCACCTAGTAGGTGAAAGGCTAGCAAAAGCTGCTGAATCATGTGGA
GTGCCTTTTGAATTCCATGCTGCTGCTATATCGGGCTGTGAGGTTCAGCTAGAAAACCTT
CAAATTAGACATGGAGAAGCCTTGGCAGTTAACTTCCCGTACGTGCTGCACCACATGCCA
GACGAGAGTGTAACCACTGCAAACCATCGAGACCGTCTACTCAGACTGGTCAAGAGCTTG
TCCCCGAAAATAGTCACCCTTGTCGAACAAGAATCTAACACCAACACTTCTGCTTTCCTT
CCAAGATTCCGTGAAACTCTGGATTACTACACCGCAATGTTCGAGTCAATTGATGCAGGT
CGCCCGGGGGATGACAAGCAAAGGATCAACGCAGAGGCGCATTGTGTGGCACGAGACATT
GTCAACATAATAGCATGTGAGGGGTCCGACAGAGTGGAAAGACACGAAGTTTTTGGAAAG
TGGAGTATGAGACTTACAATGGCTGGATTTACTCCATGCCCTTTGAGTCCATCAGTTGGT
GAAGCCATCAACGGTGTGTTGAAAGAGTTTAGCCCAAATTATCGAATTGCAGAGAACAAA
GGCGCGCTTTATCTTGGATGGAAGAACAGAGCTTTAGCGACTTCTTCAGCTTGGAGATGA