Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021673
CDS Infomation

pacid=37478717 polypeptide=PGSC0003DMP400014763 locus=PGSC0003DMG400008408 ID=PGSC0003DMT400021673.v4.03 annot-version=v4.03
Sequence

ATGGCGGTTCCTCCGACTGTCCTTGCAACGCCATCATCATTGTACGTTGGTGATCTTCAC
CACGATGTTTCCGATGGACAACTCTTTGATTTTTTTTCAGAGTTTAAAAGCCTTGCTTCC
GTTCGCGTCTGCCGTGATTCATCCACTGGACGTTCTCTCTGTTACGGCTACGTCAACTTT
GTTTCTCCTCAGGATGCTATACGTGCTATTGAGGTTAAAAATAACTCCACCCTCAATGGA
AAGGTTATGAGGGTTAGTTGGTCTCTGCGTGACCCTGATGCGAGACGAAGTGGTAAAGGA
AACGTGTTCATCAAGAACATAAGTGATACAATTGACAATGCGAAGCTTCACGAAATGTTC
CAGAAGTTCGGAAATATCTTATCTTGTAAAATTGTCACTCATGAGGACGGAAAGAGTAAG
GGATATGGATTTGTCCAGTTTGGGTCGGAGGAGTCTGCCGATGCTGCTATTGAGAAGCTT
AATGGGATCATGGCTGGAGACAAACAGATGTATGTTGGTAAGTTTGTCAAAAAAACTGAC
CGGGTTTCGCCCAATCCTGATGCTAAGTACACAAATTTGTACTTCAAGAACTTGGACGTT
GATATCTCAGAGGAGCATCTAAGAGAAAAGTTCTCTGGGTTTGGGACAATTATAAGCCTT
GTTATTGCAAAGGATGAGAGTGGAGCTCCAAAGGGTTTTGGATTTGTTAACTTTGACAAT
CCAGATGATGCTAGGAAAGCTGCCGAAGCAATGAACGGATCACCTGTTGGCTCCAAGACC
TTGTATGTAGCGAGAGCACAAAAGAAAGCAGAGCGCGAACAACTTCTGAAGCGCCTCTTT
GAAGAGAGAAGGAGGGAACAGATAATGAAATACCAGGGTTCAAATGTGTATGTCAAGAAT
ATTGATGATGATGTCACTGAGTATGAGCTGCACCAACTGTTTAGCCAATGTGGCACAATT
ACTTCTGCGAAAGTTATGCAAGATGAGAAAGGTTTGAGTAAGGGTTTTGGATTTGTATGC
TTCTCCACAGCAGAGGAGGCCTATAACGCTGTGAATACTTTTTATGGATTTATGCTGCAC
CGAAAGCCATTGTATGTGGCCATTGCTCAAAGGAAAGAGGAAAGACAGGCCCAGCTACAG
CTACAGCACGCACAACGACTGGCCGGGCTAACAGGAGCTTCAGCTATGTATCCTGGCGCA
TATCCTCCCCTTTACTATCCAGGCCATGGTGTTGTTCCTCAAGTACCAGCACGACCTGGG
CTGATGTATCAGTCTCTTGCTATGAGGCCAGGTTGGGGTACTAATGGGTTCACAAACACC
CCTAGACCTAGCTATCAACCTGCTCCAGTTCCCATGATTCCTAATACTTATCGACCATAT
CGGCAGAACAGGGGAAGGATGAATGGATATATGCCAGCTTCAAATGTGACCAATGTGCAG
CCATCAGGTCAACCAGCGGTGTCATCGAAAGATTCTCAGCGTGCTGGGCAGGTCAGATTT
GCGCCGAATGGCCAGACTCGTGATGTGACCAGAGGATCTTTTGTATCAAATGCTGCTGGT
TCTATGGCAGTTGGATCTGCTGCTGATGGTACTGAAATGCTGAGTACCTTGCTTGCTTCT
GCTAATTCTGATCAGCAGAAACAGATACTTGGCGAGCGCCTTTATCCTCTTGTTGGTAAA
CATAAGCCTGAGCTTGCTTCCAAGATAACTGGAATGTTGTTGGAGATGGACAACGCTGAA
CTGCTATTACTGTTGGAGTCTCCAGAATCTCTGGCAGCCAAGGTGGAGGAAGCTGTCGAG
GTGCTCAAGCTCTCTAACGCGAAAGTTTCCAGCCAAGAGTCGCTTCAGCCAAGTTTTCTC
TCTGCACCAGAAGTTGCAGTCAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400014763
PEP Infomation

pacid=37478717 transcript=PGSC0003DMT400021673 locus=PGSC0003DMG400008408 ID=PGSC0003DMT400021673.v4.03 annot-version=v4.03
Sequence

MAVPPTVLATPSSLYVGDLHHDVSDGQLFDFFSEFKSLASVRVCRDSSTGRSLCYGYVNF
VSPQDAIRAIEVKNNSTLNGKVMRVSWSLRDPDARRSGKGNVFIKNISDTIDNAKLHEMF
QKFGNILSCKIVTHEDGKSKGYGFVQFGSEESADAAIEKLNGIMAGDKQMYVGKFVKKTD
RVSPNPDAKYTNLYFKNLDVDISEEHLREKFSGFGTIISLVIAKDESGAPKGFGFVNFDN
PDDARKAAEAMNGSPVGSKTLYVARAQKKAEREQLLKRLFEERRREQIMKYQGSNVYVKN
IDDDVTEYELHQLFSQCGTITSAKVMQDEKGLSKGFGFVCFSTAEEAYNAVNTFYGFMLH
RKPLYVAIAQRKEERQAQLQLQHAQRLAGLTGASAMYPGAYPPLYYPGHGVVPQVPARPG
LMYQSLAMRPGWGTNGFTNTPRPSYQPAPVPMIPNTYRPYRQNRGRMNGYMPASNVTNVQ
PSGQPAVSSKDSQRAGQVRFAPNGQTRDVTRGSFVSNAAGSMAVGSAADGTEMLSTLLAS
ANSDQQKQILGERLYPLVGKHKPELASKITGMLLEMDNAELLLLLESPESLAAKVEEAVE
VLKLSNAKVSSQESLQPSFLSAPEVAVN*

Transcript Sequence

Transcript ID

PGSC0003DMT400021673
Transcript Infomation

pacid=37478717 locus=PGSC0003DMG400008408 ID=PGSC0003DMT400021673.v4.03 annot-version=v4.03
Sequence

ATGGCGGTTCCTCCGACTGTCCTTGCAACGCCATCATCATTGTACGTTGGTGATCTTCAC
CACGATGTTTCCGATGGACAACTCTTTGATTTTTTTTCAGAGTTTAAAAGCCTTGCTTCC
GTTCGCGTCTGCCGTGATTCATCCACTGGACGTTCTCTCTGTTACGGCTACGTCAACTTT
GTTTCTCCTCAGGATGCTATACGTGCTATTGAGGTTAAAAATAACTCCACCCTCAATGGA
AAGGTTATGAGGGTTAGTTGGTCTCTGCGTGACCCTGATGCGAGACGAAGTGGTAAAGGA
AACGTGTTCATCAAGAACATAAGTGATACAATTGACAATGCGAAGCTTCACGAAATGTTC
CAGAAGTTCGGAAATATCTTATCTTGTAAAATTGTCACTCATGAGGACGGAAAGAGTAAG
GGATATGGATTTGTCCAGTTTGGGTCGGAGGAGTCTGCCGATGCTGCTATTGAGAAGCTT
AATGGGATCATGGCTGGAGACAAACAGATGTATGTTGGTAAGTTTGTCAAAAAAACTGAC
CGGGTTTCGCCCAATCCTGATGCTAAGTACACAAATTTGTACTTCAAGAACTTGGACGTT
GATATCTCAGAGGAGCATCTAAGAGAAAAGTTCTCTGGGTTTGGGACAATTATAAGCCTT
GTTATTGCAAAGGATGAGAGTGGAGCTCCAAAGGGTTTTGGATTTGTTAACTTTGACAAT
CCAGATGATGCTAGGAAAGCTGCCGAAGCAATGAACGGATCACCTGTTGGCTCCAAGACC
TTGTATGTAGCGAGAGCACAAAAGAAAGCAGAGCGCGAACAACTTCTGAAGCGCCTCTTT
GAAGAGAGAAGGAGGGAACAGATAATGAAATACCAGGGTTCAAATGTGTATGTCAAGAAT
ATTGATGATGATGTCACTGAGTATGAGCTGCACCAACTGTTTAGCCAATGTGGCACAATT
ACTTCTGCGAAAGTTATGCAAGATGAGAAAGGTTTGAGTAAGGGTTTTGGATTTGTATGC
TTCTCCACAGCAGAGGAGGCCTATAACGCTGTGAATACTTTTTATGGATTTATGCTGCAC
CGAAAGCCATTGTATGTGGCCATTGCTCAAAGGAAAGAGGAAAGACAGGCCCAGCTACAG
CTACAGCACGCACAACGACTGGCCGGGCTAACAGGAGCTTCAGCTATGTATCCTGGCGCA
TATCCTCCCCTTTACTATCCAGGCCATGGTGTTGTTCCTCAAGTACCAGCACGACCTGGG
CTGATGTATCAGTCTCTTGCTATGAGGCCAGGTTGGGGTACTAATGGGTTCACAAACACC
CCTAGACCTAGCTATCAACCTGCTCCAGTTCCCATGATTCCTAATACTTATCGACCATAT
CGGCAGAACAGGGGAAGGATGAATGGATATATGCCAGCTTCAAATGTGACCAATGTGCAG
CCATCAGGTCAACCAGCGGTGTCATCGAAAGATTCTCAGCGTGCTGGGCAGGTCAGATTT
GCGCCGAATGGCCAGACTCGTGATGTGACCAGAGGATCTTTTGTATCAAATGCTGCTGGT
TCTATGGCAGTTGGATCTGCTGCTGATGGTACTGAAATGCTGAGTACCTTGCTTGCTTCT
GCTAATTCTGATCAGCAGAAACAGATACTTGGCGAGCGCCTTTATCCTCTTGTTGGTAAA
CATAAGCCTGAGCTTGCTTCCAAGATAACTGGAATGTTGTTGGAGATGGACAACGCTGAA
CTGCTATTACTGTTGGAGTCTCCAGAATCTCTGGCAGCCAAGGTGGAGGAAGCTGTCGAG
GTGCTCAAGCTCTCTAACGCGAAAGTTTCCAGCCAAGAGTCGCTTCAGCCAAGTTTTCTC
TCTGCACCAGAAGTTGCAGTCAACTGA