Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021639
CDS Infomation

pacid=37478374 polypeptide=PGSC0003DMP400014735 locus=PGSC0003DMG400008395 ID=PGSC0003DMT400021639.v4.03 annot-version=v4.03
Sequence

ATGGAGGGGTTTGCTGAGGATCAGCGGTTGAAAGAGGAAGAAGAGATGATTGAGGAGAGC
AGTGATGATTGTACTTCGGAAGACGAAGGAACAGATGATTACCGGCGGGGAGGTTATCAT
GCCGTTCGTATAGGTGATACCTTCAAAGGGGGGCGGTATGTTGTTCAGAGCAAGCTGGGT
TGGGGTCATTTTTCTACTGTTTGGCTTTCTTGGGATACTCTCATGTCCCAATTTGTAGCA
TTGAAAGTACAAAAGAGTGCACAGCACTATACGGAGGCAGCATTGGATGAGATTACAATT
CTAAAGCAGATTGCCGAAGGTGACCCTGAGGGGGGGAAAAGTGTAGTGAAGTTACTGGAT
CATTTTAAGCATTCAGGTCCAAACGGCCAACATGTGTGTATGGTTTTTGAGTATTTGGGT
GACAATCTCTTGTCACTTATTAAGTATACCGGTTATCGAGGATTGCCTATTCACATGGTT
AAAGAACTTTGTTTCCATGTTCTAGTGGGTTTGGATTATTTGCACAGACAGCTTTCTATC
ATACACACTGATCTGAAACCTGAGAACATGCTACTCTGTTCCACGATTGATCCATCTAAG
GATCCCAGAAAATCAGGAGCTCCTCTTATTCTTCCTAGTAATTTGGACAAGGCTTCACTG
GAATCTGGTACTGTAAAGGGACATGTAACATTCTATGCGAATTTAACTAATAACCAAAAG
AAGGTCAGAAGAAAGTCCAAAGAAACAGCTCAAGATTTTGCAGGGAATACAGCTGTTGAG
TCGTCTCAATCAAACGGAGATTTGCCAAATGATCATCTTGTTGGTTCTGCTAACGTTGAT
AGATTGTCCAACTCTGATGCTGCAACAGCCAGTGGGAAAGAAAGTGTGGGTCCTAAGAAA
GGCAGTGGCTCTAGAAGGAGGAAGACATTGGAGTCTGTGGACCTAAAGTGCAAATTGGTT
GATTTTGGGAATGCTTGTTGGACATACAAACAGTTCACAGATAATATACAGACGAGGCAG
TATAGGTGCCCTGAAGTTATCCTTGGGTCTAAATATTCAACCTCAGCAGATCTTTGGTCC
TTTGCTTGCATTTGTTTTGAGCTTGCGACTGGTGACGTATTGTTTGATCCTCACAGTGGT
GACAACTTCGATAGAGATGAGGATCACCTAGCACTAATGATGGAGCTTCTAGGAACAATG
CCTCGCAAAATTGCCTTGGGTGGCCGCTATTCACGTGAGTTCTTCAATAGACACGGTGAC
TTAAGGCACATCAGACGGTTACGCTTTTGGCCGTTAGATAAGGTCCTCGTAGAGAAATAC
GAATTCAGCGAGCAAGATGCAAAGGACATGGCTGATTTCCTGGTCCCAATACTTGATTTT
GATCCGGAGAAACGGCCAACTGCAGCTCAGTGTCTTCTTCATCCATGGATCAACACAGGC
CCCAGAAATTTGGAACCTCGTGTGCCTGATGCACGATCTAAAGCCACCGCTGATACTGTA
AACTTCGAGCAAATTAAGAGAGACAAGGAAAAGAAAGAGACAATGGAGGTGAGAATGGGG
AATATGGCTATTGTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400014735
PEP Infomation

pacid=37478374 transcript=PGSC0003DMT400021639 locus=PGSC0003DMG400008395 ID=PGSC0003DMT400021639.v4.03 annot-version=v4.03
Sequence

MEGFAEDQRLKEEEEMIEESSDDCTSEDEGTDDYRRGGYHAVRIGDTFKGGRYVVQSKLG
WGHFSTVWLSWDTLMSQFVALKVQKSAQHYTEAALDEITILKQIAEGDPEGGKSVVKLLD
HFKHSGPNGQHVCMVFEYLGDNLLSLIKYTGYRGLPIHMVKELCFHVLVGLDYLHRQLSI
IHTDLKPENMLLCSTIDPSKDPRKSGAPLILPSNLDKASLESGTVKGHVTFYANLTNNQK
KVRRKSKETAQDFAGNTAVESSQSNGDLPNDHLVGSANVDRLSNSDAATASGKESVGPKK
GSGSRRRKTLESVDLKCKLVDFGNACWTYKQFTDNIQTRQYRCPEVILGSKYSTSADLWS
FACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGTMPRKIALGGRYSREFFNRHGD
LRHIRRLRFWPLDKVLVEKYEFSEQDAKDMADFLVPILDFDPEKRPTAAQCLLHPWINTG
PRNLEPRVPDARSKATADTVNFEQIKRDKEKKETMEVRMGNMAIV*

Transcript Sequence

Transcript ID

PGSC0003DMT400021639
Transcript Infomation

pacid=37478374 locus=PGSC0003DMG400008395 ID=PGSC0003DMT400021639.v4.03 annot-version=v4.03
Sequence

ATGGAGGGGTTTGCTGAGGATCAGCGGTTGAAAGAGGAAGAAGAGATGATTGAGGAGAGC
AGTGATGATTGTACTTCGGAAGACGAAGGAACAGATGATTACCGGCGGGGAGGTTATCAT
GCCGTTCGTATAGGTGATACCTTCAAAGGGGGGCGGTATGTTGTTCAGAGCAAGCTGGGT
TGGGGTCATTTTTCTACTGTTTGGCTTTCTTGGGATACTCTCATGTCCCAATTTGTAGCA
TTGAAAGTACAAAAGAGTGCACAGCACTATACGGAGGCAGCATTGGATGAGATTACAATT
CTAAAGCAGATTGCCGAAGGTGACCCTGAGGGGGGGAAAAGTGTAGTGAAGTTACTGGAT
CATTTTAAGCATTCAGGTCCAAACGGCCAACATGTGTGTATGGTTTTTGAGTATTTGGGT
GACAATCTCTTGTCACTTATTAAGTATACCGGTTATCGAGGATTGCCTATTCACATGGTT
AAAGAACTTTGTTTCCATGTTCTAGTGGGTTTGGATTATTTGCACAGACAGCTTTCTATC
ATACACACTGATCTGAAACCTGAGAACATGCTACTCTGTTCCACGATTGATCCATCTAAG
GATCCCAGAAAATCAGGAGCTCCTCTTATTCTTCCTAGTAATTTGGACAAGGCTTCACTG
GAATCTGGTACTGTAAAGGGACATGTAACATTCTATGCGAATTTAACTAATAACCAAAAG
AAGGTCAGAAGAAAGTCCAAAGAAACAGCTCAAGATTTTGCAGGGAATACAGCTGTTGAG
TCGTCTCAATCAAACGGAGATTTGCCAAATGATCATCTTGTTGGTTCTGCTAACGTTGAT
AGATTGTCCAACTCTGATGCTGCAACAGCCAGTGGGAAAGAAAGTGTGGGTCCTAAGAAA
GGCAGTGGCTCTAGAAGGAGGAAGACATTGGAGTCTGTGGACCTAAAGTGCAAATTGGTT
GATTTTGGGAATGCTTGTTGGACATACAAACAGTTCACAGATAATATACAGACGAGGCAG
TATAGGTGCCCTGAAGTTATCCTTGGGTCTAAATATTCAACCTCAGCAGATCTTTGGTCC
TTTGCTTGCATTTGTTTTGAGCTTGCGACTGGTGACGTATTGTTTGATCCTCACAGTGGT
GACAACTTCGATAGAGATGAGGATCACCTAGCACTAATGATGGAGCTTCTAGGAACAATG
CCTCGCAAAATTGCCTTGGGTGGCCGCTATTCACGTGAGTTCTTCAATAGACACGGTGAC
TTAAGGCACATCAGACGGTTACGCTTTTGGCCGTTAGATAAGGTCCTCGTAGAGAAATAC
GAATTCAGCGAGCAAGATGCAAAGGACATGGCTGATTTCCTGGTCCCAATACTTGATTTT
GATCCGGAGAAACGGCCAACTGCAGCTCAGTGTCTTCTTCATCCATGGATCAACACAGGC
CCCAGAAATTTGGAACCTCGTGTGCCTGATGCACGATCTAAAGCCACCGCTGATACTGTA
AACTTCGAGCAAATTAAGAGAGACAAGGAAAAGAAAGAGACAATGGAGGTGAGAATGGGG
AATATGGCTATTGTCTAG