Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021637
CDS Infomation

pacid=37480171 polypeptide=PGSC0003DMP400014734 locus=PGSC0003DMG400008394 ID=PGSC0003DMT400021637.v4.03 annot-version=v4.03
Sequence

ATGGCCGATCCTGTAATTGGTGCTACTGTTCAAGTTTTGCTTGAAAAGTTGATTTCTCTC
ACTATCGAGGAGGTCAACAGCTCAAGGGATTTCAACAAAGATCTCGAAATGTTGACACAA
AATGTATCCTTAATCCAAGCTTTCATTCATGATGTTGAAACACCACAAGTTGAGAAACAA
CAGTCTATCGAACAATGGCTCAACAGGCTTGAGAGAGTTGCTGAAGATGCTGAAAATGTG
TTTGATCGATTCAGATATGAATCTCTCAAAACAAAAGTGGTGAGGAGCCCATTGAAAAAG
GTCAGTGGTTTCTTTTCTCATACTGCTTTTAAGAGAAAAATGTCTCAAAAAATCAACAAC
ATCAATAAAGAGTTGACGGCTATCAATAAGGTAGCCAAAGACCTCGGTCTACAATCACTC
ATGGTTCCTTTTCGGAAAATACTACCAATTCGAGAAACAGATTCCTTAGTAGTTGCTTCT
GATATTGTTGGTAGAGATTTGGATGTTGCTGAGATAAAGGAGAAGATTTTGAACATGAGA
GAGGAGGATATTGTTCTGTCCACCATTCCCATAGTAGGTATGGGAGGTTTAGGGAAAACA
ACTGTGGCTAAGAGGATTTACAATGATGAACACATCCAGCAAATCTTTGAAAAGAGAATT
TGGTTGTGTCTACCTGAAATGTCTGAAACGAAGTGCTTTCTTGAACAAATCCTCGAATCA
TTGATAGAGAGGAGAATTGAGGTTGAAAGGAGAGATATAATAGTCAAGAAGCTACAAGAT
GAATTGAGAGGAAAAAAATATTTGCTAGTCCTGGATGATTTGTGGTGTGTTGACTCTACA
TCATGGCATGAGTTCGTTGACACCTTGAGAGGAATAAATACATCCAGAGGAAACTGCATT
CTTGTGACTACTCGTATGAAGCGGGTGGCATCCACAGTAGCAACAGATCTTCATATCTTG
GGGAAGTTAACAGAAGATCATTGTTGGTCTATTTTCAAACAAAAAGCATTTGTTGATGGC
AGGGTTCCAGAGGAATTAGCGAGCATGGGCAACAAGATTGTTAAAATGTGCCAAGGTCTA
CCGTTGGCTGCAAGTGCGTTGGGAGGGCTCTTACACAACAAAGAAAAACATGAATGGCAA
GCAATTCTTGATGGCAGCCTCCTTGTTGCAGGTGAAGATGATAATGGAGAAAATAGCATA
AAGAAAATCCTAAAACTCAGCTATGATTATCTACCATCTCCACATCTGAAAAAATGCTTT
GCTTACTTTGCAATGTTTCCAAAAGATTATATGTTTGAAAAGGACCAACTAATCCAACTC
TGGATGGCAGAAGGGTTTCTTCGTCCAAGTCAAGAGATCCCTGTGATGGAAGACGTTGGG
CACAGGTTTTTTCAAATCTTGTTGCAGAATTCCTTGCTACAAGATGTTGTGTTAGATGAA
CACAACACTATAACACACTATAAGATGCACGATCTTGTGCATGATTTGGCTGGAGATATC
TTAAAATCTAGACTATTTGATCCGAAGGGAGACAATGGAGAAAAACTTTCTCAAGTTCGA
TACTTTGGATGTGAGTCACCAACGGATCAAATAGATAAGATATATGAGCCAGAACGTTTG
TGCACACTGTTTTGGAGAAGCAATTATACGTCTAAAGATATGCTGTTGAACTTTAAGTTC
TTGAGAGTTTTAGATTTGTCCAGTTCAGGAATCAAGGAGTTGTCAGCCAAAATGGGGAAG
CTGATATACTTGAGATATCTTGATCTCTCGAACACTGAGATCACAGCCTTGCCCAACTCC
ATTTGCGAGCTCTATAATTTGCAAACATTTAGAGTCATCAACTGCTTTTCACTCCAGAAA
CTTCCATATGAGATGAGAAATATGATAAGTTTGAGACACATATATTACACTTCTGTTGAC
GAAACAAGTGGGCATTGGGGAGGATGGTGTCTTCACAATGAACATTTTCAGATTCCACTT
AATATGGGGCAATTGACTAGTCTTCAAACCCTCAAGTTTTTCAAGGTAGGTTTAGAGAAA
GGTCGTCAAATAGAAGAATTAGGTCATTTGAAAAACCTAAGAGGTGAATTGACAATCAAT
GGTCTCCAATTGGTCTGTGATAAAGAAGAGGCTCGAACAGCATATTTACACGATAAACCA
AATATCTGCAAGCTGGCATATTTATGGTCCCATGATGAATCAGAAGGCTGTGAGATCAAT
GATGAGCATGTGTTGGATGGTCTTCAACCGCATCCTAACTTGAAAACCTTAGCAGTAGTG
GACTATTTAGGGACTAAATTTCCTTCATGGTTCAGTGAAGAGTCTCTACCAAATTTGGTC
AAGTTGAAATTAAGTGGTAGCAAAAGGTGCAAAGAAATTCCATCCCTTGGCCAACTGAAA
TTCCTTCGGCATCTTGAGCTGATAGGATTCCATGAGTTGGAATGCATTGGACCTGCTTTA
GATGGTGTTGAGATTAGAAATATTGGATCAAACAGCATTATCCAAGTGTTCCCATCATTG
AAAGAACTAGTATTGGAGGATATGCGTAGCCTTATTGAGTGGAAGGGAGATGAAGTTGGA
GTAAGAATGTCTCCCAGGCTTGAGAAGTTGCGGATTACAGACTGTCCATTGTTAAAAAGT
ATTCCGAATCAATTTGAAATCCTCCGTCAATTAGAAATTAGAGGAGTTGACAGTGAAATG
CCATTGTTGAACTTGTGCAGCAACTTGACATCTCTCGTAAAGCTTAGTGTCTATGATATG
AAAGAGCTCACTTGTCTTCCAGATGAGATACTACGTAACAACGTTTCTCTTCAACAGATA
ACGATTTTCAACTGCGGAGAGTTTCGTGAATTGCCACAAAGCTTGTACAATCTCCATTCT
CTTAAGAGATTAGACATTTACAACTGCACCAATTTCAGTTCTCTTCCTGTTCCCAATGGA
GACAACTATTTGACTTCCCTCGAATTCTTTTTCTTATACAATTGTAATGGATTGATCAGT
TTACCAATTGGAATGCTAGATCAATGCCGGTCTCTAGAGTTTTTGTGTGTCAGCTGCTGT
AACAACTTGGTTTCATTCCCTTTACATGTGTGGGAAATGCCTTCATTTTCATTTTTGGAT
ATAACAGAATGTCCCAAATTGATTAGTGTACCCAAAGTGGGCCTTCACCATCTCACCGGG
TTATTGAGATTGGGAATTGGTCCTTTCTCAGAGATGGTGGATTTTGATGCATTCCAATTG
ATTTTTAATGGCATTCAGCAGCTGTTGTCCCTTCGTGATCTGGAGGTGTACGGACGTGGG
CACTGGGATTCTCTGCCCTATCAGATTATGCAACTATCTGACCTAAGAGAGATCACAATA
GCTGATTTTGGAATTGAGGCTCTTCCTCCTAGACTTGACAACCTTACTTCTCTTGAAAGT
TTGACTCTAGTGAGGTGCAAACAGCTACAACATCTGAACTTCTCAGATGCCATGCCCAAA
TTACGGCTTCTGTGTATAAGTGATTGTCCATTGTTAGAAGCTCTGTCGGATGGGCTCGGC
AACCTTGTTTCTTTGGAAGAATTATATTTACATGACTGCGAAAAACTAGAGCATCTACCG
TCCCGAGATGCCATGCGACGCCTCACTAAATTATGGAACATGGGAATTAAAGGCTGCCCA
AAGTTAGAAGAAAGTTTCACCAACTACTCCCAGTGGTCCAAAATTTCCCATATTTCAAAT
ATTGAATTAGGTGGGCGGAGAAGGACAACCGTAGCTGGTTCAAAACGTCTCTGTGGTAAA
TCAAGCCAAATCGTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400014734
PEP Infomation

pacid=37480171 transcript=PGSC0003DMT400021637 locus=PGSC0003DMG400008394 ID=PGSC0003DMT400021637.v4.03 annot-version=v4.03
Sequence

MADPVIGATVQVLLEKLISLTIEEVNSSRDFNKDLEMLTQNVSLIQAFIHDVETPQVEKQ
QSIEQWLNRLERVAEDAENVFDRFRYESLKTKVVRSPLKKVSGFFSHTAFKRKMSQKINN
INKELTAINKVAKDLGLQSLMVPFRKILPIRETDSLVVASDIVGRDLDVAEIKEKILNMR
EEDIVLSTIPIVGMGGLGKTTVAKRIYNDEHIQQIFEKRIWLCLPEMSETKCFLEQILES
LIERRIEVERRDIIVKKLQDELRGKKYLLVLDDLWCVDSTSWHEFVDTLRGINTSRGNCI
LVTTRMKRVASTVATDLHILGKLTEDHCWSIFKQKAFVDGRVPEELASMGNKIVKMCQGL
PLAASALGGLLHNKEKHEWQAILDGSLLVAGEDDNGENSIKKILKLSYDYLPSPHLKKCF
AYFAMFPKDYMFEKDQLIQLWMAEGFLRPSQEIPVMEDVGHRFFQILLQNSLLQDVVLDE
HNTITHYKMHDLVHDLAGDILKSRLFDPKGDNGEKLSQVRYFGCESPTDQIDKIYEPERL
CTLFWRSNYTSKDMLLNFKFLRVLDLSSSGIKELSAKMGKLIYLRYLDLSNTEITALPNS
ICELYNLQTFRVINCFSLQKLPYEMRNMISLRHIYYTSVDETSGHWGGWCLHNEHFQIPL
NMGQLTSLQTLKFFKVGLEKGRQIEELGHLKNLRGELTINGLQLVCDKEEARTAYLHDKP
NICKLAYLWSHDESEGCEINDEHVLDGLQPHPNLKTLAVVDYLGTKFPSWFSEESLPNLV
KLKLSGSKRCKEIPSLGQLKFLRHLELIGFHELECIGPALDGVEIRNIGSNSIIQVFPSL
KELVLEDMRSLIEWKGDEVGVRMSPRLEKLRITDCPLLKSIPNQFEILRQLEIRGVDSEM
PLLNLCSNLTSLVKLSVYDMKELTCLPDEILRNNVSLQQITIFNCGEFRELPQSLYNLHS
LKRLDIYNCTNFSSLPVPNGDNYLTSLEFFFLYNCNGLISLPIGMLDQCRSLEFLCVSCC
NNLVSFPLHVWEMPSFSFLDITECPKLISVPKVGLHHLTGLLRLGIGPFSEMVDFDAFQL
IFNGIQQLLSLRDLEVYGRGHWDSLPYQIMQLSDLREITIADFGIEALPPRLDNLTSLES
LTLVRCKQLQHLNFSDAMPKLRLLCISDCPLLEALSDGLGNLVSLEELYLHDCEKLEHLP
SRDAMRRLTKLWNMGIKGCPKLEESFTNYSQWSKISHISNIELGGRRRTTVAGSKRLCGK
SSQIV*

Transcript Sequence

Transcript ID

PGSC0003DMT400021637
Transcript Infomation

pacid=37480171 locus=PGSC0003DMG400008394 ID=PGSC0003DMT400021637.v4.03 annot-version=v4.03
Sequence

ATGGCCGATCCTGTAATTGGTGCTACTGTTCAAGTTTTGCTTGAAAAGTTGATTTCTCTC
ACTATCGAGGAGGTCAACAGCTCAAGGGATTTCAACAAAGATCTCGAAATGTTGACACAA
AATGTATCCTTAATCCAAGCTTTCATTCATGATGTTGAAACACCACAAGTTGAGAAACAA
CAGTCTATCGAACAATGGCTCAACAGGCTTGAGAGAGTTGCTGAAGATGCTGAAAATGTG
TTTGATCGATTCAGATATGAATCTCTCAAAACAAAAGTGGTGAGGAGCCCATTGAAAAAG
GTCAGTGGTTTCTTTTCTCATACTGCTTTTAAGAGAAAAATGTCTCAAAAAATCAACAAC
ATCAATAAAGAGTTGACGGCTATCAATAAGGTAGCCAAAGACCTCGGTCTACAATCACTC
ATGGTTCCTTTTCGGAAAATACTACCAATTCGAGAAACAGATTCCTTAGTAGTTGCTTCT
GATATTGTTGGTAGAGATTTGGATGTTGCTGAGATAAAGGAGAAGATTTTGAACATGAGA
GAGGAGGATATTGTTCTGTCCACCATTCCCATAGTAGGTATGGGAGGTTTAGGGAAAACA
ACTGTGGCTAAGAGGATTTACAATGATGAACACATCCAGCAAATCTTTGAAAAGAGAATT
TGGTTGTGTCTACCTGAAATGTCTGAAACGAAGTGCTTTCTTGAACAAATCCTCGAATCA
TTGATAGAGAGGAGAATTGAGGTTGAAAGGAGAGATATAATAGTCAAGAAGCTACAAGAT
GAATTGAGAGGAAAAAAATATTTGCTAGTCCTGGATGATTTGTGGTGTGTTGACTCTACA
TCATGGCATGAGTTCGTTGACACCTTGAGAGGAATAAATACATCCAGAGGAAACTGCATT
CTTGTGACTACTCGTATGAAGCGGGTGGCATCCACAGTAGCAACAGATCTTCATATCTTG
GGGAAGTTAACAGAAGATCATTGTTGGTCTATTTTCAAACAAAAAGCATTTGTTGATGGC
AGGGTTCCAGAGGAATTAGCGAGCATGGGCAACAAGATTGTTAAAATGTGCCAAGGTCTA
CCGTTGGCTGCAAGTGCGTTGGGAGGGCTCTTACACAACAAAGAAAAACATGAATGGCAA
GCAATTCTTGATGGCAGCCTCCTTGTTGCAGGTGAAGATGATAATGGAGAAAATAGCATA
AAGAAAATCCTAAAACTCAGCTATGATTATCTACCATCTCCACATCTGAAAAAATGCTTT
GCTTACTTTGCAATGTTTCCAAAAGATTATATGTTTGAAAAGGACCAACTAATCCAACTC
TGGATGGCAGAAGGGTTTCTTCGTCCAAGTCAAGAGATCCCTGTGATGGAAGACGTTGGG
CACAGGTTTTTTCAAATCTTGTTGCAGAATTCCTTGCTACAAGATGTTGTGTTAGATGAA
CACAACACTATAACACACTATAAGATGCACGATCTTGTGCATGATTTGGCTGGAGATATC
TTAAAATCTAGACTATTTGATCCGAAGGGAGACAATGGAGAAAAACTTTCTCAAGTTCGA
TACTTTGGATGTGAGTCACCAACGGATCAAATAGATAAGATATATGAGCCAGAACGTTTG
TGCACACTGTTTTGGAGAAGCAATTATACGTCTAAAGATATGCTGTTGAACTTTAAGTTC
TTGAGAGTTTTAGATTTGTCCAGTTCAGGAATCAAGGAGTTGTCAGCCAAAATGGGGAAG
CTGATATACTTGAGATATCTTGATCTCTCGAACACTGAGATCACAGCCTTGCCCAACTCC
ATTTGCGAGCTCTATAATTTGCAAACATTTAGAGTCATCAACTGCTTTTCACTCCAGAAA
CTTCCATATGAGATGAGAAATATGATAAGTTTGAGACACATATATTACACTTCTGTTGAC
GAAACAAGTGGGCATTGGGGAGGATGGTGTCTTCACAATGAACATTTTCAGATTCCACTT
AATATGGGGCAATTGACTAGTCTTCAAACCCTCAAGTTTTTCAAGGTAGGTTTAGAGAAA
GGTCGTCAAATAGAAGAATTAGGTCATTTGAAAAACCTAAGAGGTGAATTGACAATCAAT
GGTCTCCAATTGGTCTGTGATAAAGAAGAGGCTCGAACAGCATATTTACACGATAAACCA
AATATCTGCAAGCTGGCATATTTATGGTCCCATGATGAATCAGAAGGCTGTGAGATCAAT
GATGAGCATGTGTTGGATGGTCTTCAACCGCATCCTAACTTGAAAACCTTAGCAGTAGTG
GACTATTTAGGGACTAAATTTCCTTCATGGTTCAGTGAAGAGTCTCTACCAAATTTGGTC
AAGTTGAAATTAAGTGGTAGCAAAAGGTGCAAAGAAATTCCATCCCTTGGCCAACTGAAA
TTCCTTCGGCATCTTGAGCTGATAGGATTCCATGAGTTGGAATGCATTGGACCTGCTTTA
GATGGTGTTGAGATTAGAAATATTGGATCAAACAGCATTATCCAAGTGTTCCCATCATTG
AAAGAACTAGTATTGGAGGATATGCGTAGCCTTATTGAGTGGAAGGGAGATGAAGTTGGA
GTAAGAATGTCTCCCAGGCTTGAGAAGTTGCGGATTACAGACTGTCCATTGTTAAAAAGT
ATTCCGAATCAATTTGAAATCCTCCGTCAATTAGAAATTAGAGGAGTTGACAGTGAAATG
CCATTGTTGAACTTGTGCAGCAACTTGACATCTCTCGTAAAGCTTAGTGTCTATGATATG
AAAGAGCTCACTTGTCTTCCAGATGAGATACTACGTAACAACGTTTCTCTTCAACAGATA
ACGATTTTCAACTGCGGAGAGTTTCGTGAATTGCCACAAAGCTTGTACAATCTCCATTCT
CTTAAGAGATTAGACATTTACAACTGCACCAATTTCAGTTCTCTTCCTGTTCCCAATGGA
GACAACTATTTGACTTCCCTCGAATTCTTTTTCTTATACAATTGTAATGGATTGATCAGT
TTACCAATTGGAATGCTAGATCAATGCCGGTCTCTAGAGTTTTTGTGTGTCAGCTGCTGT
AACAACTTGGTTTCATTCCCTTTACATGTGTGGGAAATGCCTTCATTTTCATTTTTGGAT
ATAACAGAATGTCCCAAATTGATTAGTGTACCCAAAGTGGGCCTTCACCATCTCACCGGG
TTATTGAGATTGGGAATTGGTCCTTTCTCAGAGATGGTGGATTTTGATGCATTCCAATTG
ATTTTTAATGGCATTCAGCAGCTGTTGTCCCTTCGTGATCTGGAGGTGTACGGACGTGGG
CACTGGGATTCTCTGCCCTATCAGATTATGCAACTATCTGACCTAAGAGAGATCACAATA
GCTGATTTTGGAATTGAGGCTCTTCCTCCTAGACTTGACAACCTTACTTCTCTTGAAAGT
TTGACTCTAGTGAGGTGCAAACAGCTACAACATCTGAACTTCTCAGATGCCATGCCCAAA
TTACGGCTTCTGTGTATAAGTGATTGTCCATTGTTAGAAGCTCTGTCGGATGGGCTCGGC
AACCTTGTTTCTTTGGAAGAATTATATTTACATGACTGCGAAAAACTAGAGCATCTACCG
TCCCGAGATGCCATGCGACGCCTCACTAAATTATGGAACATGGGAATTAAAGGCTGCCCA
AAGTTAGAAGAAAGTTTCACCAACTACTCCCAGTGGTCCAAAATTTCCCATATTTCAAAT
ATTGAATTAGGTGGGCGGAGAAGGACAACCGTAGCTGGTTCAAAACGTCTCTGTGGTAAA
TCAAGCCAAATCGTATGA