Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021541
CDS Infomation

pacid=37478808 polypeptide=PGSC0003DMP400014655 locus=PGSC0003DMG400008353 ID=PGSC0003DMT400021541.v4.03 annot-version=v4.03
Sequence

ATGAGTTTCGAGGATCATGGGAAACATACCATTTCAGTCGGACCATGGGGAGGTGAAAAT
GGATTGCATTGGGATGATGGAGTTTATTCCACCATAAGGCAGCTGGAAATAGCTCATGGA
ACAGGAGTTGATTCGATTAAGGTCGAATATGACAAAAATGGAACCTCAGTGTTCTCCGAG
AAGCATGGTGGCGGTGTAGGTGCTAAAACAGACAAGATAATACTTAGCTATCCAGATGAG
TTTCTAACTTCTATGCACGGATATTATGGTAGCTTGTACGAAAGAGGGTCAGTTTTTGTT
CGATCACTTACATTTGAAAGCAACAAAAGGACGTATGGACCATATGGTGTCGAGCAAGGA
ACATATTTCACTCTACCAATCTCTAGAGGAAAAATTGTTGGCTTTCATGGAAAATCTGGC
TGGTATCTTGATGCTATTGGAGTATACATAGAGCCTATTCACAAGGCTTTACCGACTCAT
TCTGTAGTTCCATCTCACCAACTCCATTCTATCGGTCATTCTCATCAAAGCATTGTCCAA
GGGATGGAAACTTATGAATACTCAATGATACAAGGAAGTCTTGGTAAAAATTTTGATCTC
ATTGTTGCAGTTAGACACAAGGAGGATCACAACAAAATTTTACCTCCAAACACACTTTCA
AGACAAAGTTCTAGTTCTGATCACGATTCTAGCTCTAACGAACCAAATAAAAAGGTGGCA
ACTGTAGCCCCTGCCCCTATTGAAAGAGTCCCATCGAAAACTGTCAAGGGTGTTGTGACC
TATTGTCCATGGGGTGGAAGTGGAGGGAATGTCTTTGATGATGGTATCTATGATGGTGTT
AGGCAAGTTTACTTGTCACGTAACGTGGGAATCGTTTCAGTAAGAGCTTGCTACGACAAA
AATGGACAAGCGATATGGGGAAGTAAAAATGGTGGTACTGGAAGTTTCAAAACCGAAAAG
ATAATATTTGATTATCCATCAGAGATTTTGACTCACATTACAGGCTACTATGGACCAACC
ATGATTATGGGACCGAACATTATACATTCGTTAACTTTTCATACCACGAAAGGCAAACAT
GGACCTTATGGAGAAGAACAAGGACAACAATTCTCAACAAAACTGAAAGATGGGATGATT
GTTGGTTTTCATGGGAGGAAAGGAATGTTTCTTGATGCACTCGGTGTTCACGTGTTGGAA
GGAAAAGTTACCCCGTGCTTACCTCCAGCCCCGGCCCTCAACGCGGTTAAACCAAATGCA
GCATCTGTTCCATCCTTACATTCCTCAGCTCCCCTCAAATCTAACAAACACGTTGCACAA
ATTGTCCCATCTTTAACTCACTCAGCTCCGCTGAAACCTGCCAAACCAAAAGCATCATTT
GTCACTGAGGCTGATGAAAGTACACAATGGTCATTTAAACTAGGAAGAAAAGGACTAACT
GATGAGGGAGTCCAAAAGATAGTAAAAGATCCAGCACCATATGGACCTGGCCCATGGGGT
GGAGAAGGTGGAAAGCCATGGGATGATGGAGTTTTCACTGGGATCAAACAGATAATCCTA
ACACAAACATCAGAGGCCATTTCTTGCATCGAAATTGAGTATGAACGAAATGGACAATCT
GTTTGGTCAGTAAAACATGGTGCAAATGTTGGGAAATTCACAAATAAGGTAAAATTAGAG
TTTCCTCATGAAGTTTTAACATGTATTACTGGATTCTATGGTCCTATAAGTAAGGATATG
GGATTGAAAGTGATAAAATCATTAACTTTTCACACAACTAGAAGGAAATTTGGGCCTTTT
GGAGAGGAATTGGGAACATATTTCACATCATCAACAACAGAAGGAAAAGTTGTGGGATTT
CATGGTAGGAGTGGAATGTATTTGGATGCAATTGGAGTGCATATGCAACATTGGTTAGGC
AATCAAAGAACTTCCAAAAATCCTCTTATGAAAATGTTCCACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400014655
PEP Infomation

pacid=37478808 transcript=PGSC0003DMT400021541 locus=PGSC0003DMG400008353 ID=PGSC0003DMT400021541.v4.03 annot-version=v4.03
Sequence

MSFEDHGKHTISVGPWGGENGLHWDDGVYSTIRQLEIAHGTGVDSIKVEYDKNGTSVFSE
KHGGGVGAKTDKIILSYPDEFLTSMHGYYGSLYERGSVFVRSLTFESNKRTYGPYGVEQG
TYFTLPISRGKIVGFHGKSGWYLDAIGVYIEPIHKALPTHSVVPSHQLHSIGHSHQSIVQ
GMETYEYSMIQGSLGKNFDLIVAVRHKEDHNKILPPNTLSRQSSSSDHDSSSNEPNKKVA
TVAPAPIERVPSKTVKGVVTYCPWGGSGGNVFDDGIYDGVRQVYLSRNVGIVSVRACYDK
NGQAIWGSKNGGTGSFKTEKIIFDYPSEILTHITGYYGPTMIMGPNIIHSLTFHTTKGKH
GPYGEEQGQQFSTKLKDGMIVGFHGRKGMFLDALGVHVLEGKVTPCLPPAPALNAVKPNA
ASVPSLHSSAPLKSNKHVAQIVPSLTHSAPLKPAKPKASFVTEADESTQWSFKLGRKGLT
DEGVQKIVKDPAPYGPGPWGGEGGKPWDDGVFTGIKQIILTQTSEAISCIEIEYERNGQS
VWSVKHGANVGKFTNKVKLEFPHEVLTCITGFYGPISKDMGLKVIKSLTFHTTRRKFGPF
GEELGTYFTSSTTEGKVVGFHGRSGMYLDAIGVHMQHWLGNQRTSKNPLMKMFH*

Transcript Sequence

Transcript ID

PGSC0003DMT400021541
Transcript Infomation

pacid=37478808 locus=PGSC0003DMG400008353 ID=PGSC0003DMT400021541.v4.03 annot-version=v4.03
Sequence

ATGAGTTTCGAGGATCATGGGAAACATACCATTTCAGTCGGACCATGGGGAGGTGAAAAT
GGATTGCATTGGGATGATGGAGTTTATTCCACCATAAGGCAGCTGGAAATAGCTCATGGA
ACAGGAGTTGATTCGATTAAGGTCGAATATGACAAAAATGGAACCTCAGTGTTCTCCGAG
AAGCATGGTGGCGGTGTAGGTGCTAAAACAGACAAGATAATACTTAGCTATCCAGATGAG
TTTCTAACTTCTATGCACGGATATTATGGTAGCTTGTACGAAAGAGGGTCAGTTTTTGTT
CGATCACTTACATTTGAAAGCAACAAAAGGACGTATGGACCATATGGTGTCGAGCAAGGA
ACATATTTCACTCTACCAATCTCTAGAGGAAAAATTGTTGGCTTTCATGGAAAATCTGGC
TGGTATCTTGATGCTATTGGAGTATACATAGAGCCTATTCACAAGGCTTTACCGACTCAT
TCTGTAGTTCCATCTCACCAACTCCATTCTATCGGTCATTCTCATCAAAGCATTGTCCAA
GGGATGGAAACTTATGAATACTCAATGATACAAGGAAGTCTTGGTAAAAATTTTGATCTC
ATTGTTGCAGTTAGACACAAGGAGGATCACAACAAAATTTTACCTCCAAACACACTTTCA
AGACAAAGTTCTAGTTCTGATCACGATTCTAGCTCTAACGAACCAAATAAAAAGGTGGCA
ACTGTAGCCCCTGCCCCTATTGAAAGAGTCCCATCGAAAACTGTCAAGGGTGTTGTGACC
TATTGTCCATGGGGTGGAAGTGGAGGGAATGTCTTTGATGATGGTATCTATGATGGTGTT
AGGCAAGTTTACTTGTCACGTAACGTGGGAATCGTTTCAGTAAGAGCTTGCTACGACAAA
AATGGACAAGCGATATGGGGAAGTAAAAATGGTGGTACTGGAAGTTTCAAAACCGAAAAG
ATAATATTTGATTATCCATCAGAGATTTTGACTCACATTACAGGCTACTATGGACCAACC
ATGATTATGGGACCGAACATTATACATTCGTTAACTTTTCATACCACGAAAGGCAAACAT
GGACCTTATGGAGAAGAACAAGGACAACAATTCTCAACAAAACTGAAAGATGGGATGATT
GTTGGTTTTCATGGGAGGAAAGGAATGTTTCTTGATGCACTCGGTGTTCACGTGTTGGAA
GGAAAAGTTACCCCGTGCTTACCTCCAGCCCCGGCCCTCAACGCGGTTAAACCAAATGCA
GCATCTGTTCCATCCTTACATTCCTCAGCTCCCCTCAAATCTAACAAACACGTTGCACAA
ATTGTCCCATCTTTAACTCACTCAGCTCCGCTGAAACCTGCCAAACCAAAAGCATCATTT
GTCACTGAGGCTGATGAAAGTACACAATGGTCATTTAAACTAGGAAGAAAAGGACTAACT
GATGAGGGAGTCCAAAAGATAGTAAAAGATCCAGCACCATATGGACCTGGCCCATGGGGT
GGAGAAGGTGGAAAGCCATGGGATGATGGAGTTTTCACTGGGATCAAACAGATAATCCTA
ACACAAACATCAGAGGCCATTTCTTGCATCGAAATTGAGTATGAACGAAATGGACAATCT
GTTTGGTCAGTAAAACATGGTGCAAATGTTGGGAAATTCACAAATAAGGTAAAATTAGAG
TTTCCTCATGAAGTTTTAACATGTATTACTGGATTCTATGGTCCTATAAGTAAGGATATG
GGATTGAAAGTGATAAAATCATTAACTTTTCACACAACTAGAAGGAAATTTGGGCCTTTT
GGAGAGGAATTGGGAACATATTTCACATCATCAACAACAGAAGGAAAAGTTGTGGGATTT
CATGGTAGGAGTGGAATGTATTTGGATGCAATTGGAGTGCATATGCAACATTGGTTAGGC
AATCAAAGAACTTCCAAAAATCCTCTTATGAAAATGTTCCACTAA