Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021507
CDS Infomation

pacid=37460085 polypeptide=PGSC0003DMP400014632 locus=PGSC0003DMG400008342 ID=PGSC0003DMT400021507.v4.03 annot-version=v4.03
Sequence

ATGCGTCCTCTGTCCTCTTCTTCGCCGCCGGTTTTACCTAACGACGCTTCTGAGAGCGGT
GACTCCGCCGAGCGCCGTCTTCATGAGGCGGAGGAGCGCTTAAGAGAGGCAATTGAAGAG
CTTCAGCGCCGGCAACGTCGTGCCAGGTGTATCTACCCGCCCTGTGACCATGCCGATGAA
TCATGTGTTGCTAACGCAATTGGTAACGTTTGTCAAAGTTTTCTTCTCTCTTACGGTGTG
CGCGTTGGCATCGGAATTCTCCTCCGTGCTTTTAAGCTAGCTCGGCGCCAGTCCTATTCC
TCTCTACTCGATCTCAAGCAACTTGTGTCCGAAAAAGACCTAATTGTAAGAGAGGAAGCA
TGTCGAATTGGTTTGCTCTTTGGGGGATTTAGTGGTTCATATCATGCTCTAAGATGCTTG
CTAAGAAAGCTGAGAAGAAAAGAGACACCCTTAAATGCAATTTTAGCAGGTTCAGTGGCA
GGTCTGTCTATTTTAGCATTAGATGATTCCAACAGGCGGCGGACTCTTGCCTTGTATCTT
CTGGCAAGGCTATCACAGTGCGCGTATAATTCTGCCAAATCCAAGAACCGGTTTCATCTC
TGGGGAAGTCACTGGAGTCATGGGGATTCTTTACTCTTTGCATTGGCATGTGCCCAGGTT
ATGTATTGCTTCATAATGCGTCCTGAGAGCCTTCCAAAAGCATATAGAGATTTCATTCAG
AAGACTGGGCCTGTTTCAGCACCAGTCTACAAAGCTGTTAAGGATTGCTGTAGAGGCTCT
CCAGTTGATGTTGCTTCATTACATGCCTATTTGTCCAAAGCAAAGGGCTCTACTACTATG
AAGTTGGAAGAGTTTCCTTCTATTATCCCATGCTCTGTAATTCACCCTGGGACCAAATCT
TGCTTAGTTCATGATGCTAATGCAGCGGCAGCTACTTTCCGGAAAACATTTCCTCTTTAC
TTCTCTTTGACTTTTGTGCCCTTTGTCGTTCTACGCTTGCAGAAGTTTATGGATGCTCCT
ACACGCACCTGTTGGTATGCTCTTACAGGGGCTGTTCGCTCGACAACCTTCTTGTCCGCT
TTTGTTGGAATCTTTCAGGCTGTCATATGTTGCCACCGGAAGGTGGCATCAAAGGACCAT
AAGCTTGTATATTGGGTAGCTGGGGCCCTCTCAGGCCTATCTGTGTTGCTGGAGAAGAAA
GCTAGACGTGGAGAACTAGCCTTGTATGTTCTTCCTCGAGCTGCAGATTCTTTGTGGTAT
ATATTGGTGAATCGCCATTTGCTTCCGGATATCAAGAATGCTGAGGTGCCCTTGTTTTGT
GCCTGTATGGGTGGTATTATGTACTACCTGGAGCATGAACCAGACACCATGGCTCCCTTC
CTCAGAGGCCTGATCCGCCGCTTCCTTGCAAGCAGAATCAGCAATCCTACTCCTCCATCA
AATAAAGGTGCCTCCTATACATATCTACACACTCACGATGCCATGAAAGAGACAAAAATG
GCAGAAATCCGTGAGACTGAAACTTTAACTGCAGAGAAGTACAACCTTGAATCAATACCA
GGACTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400014632
PEP Infomation

pacid=37460085 transcript=PGSC0003DMT400021507 locus=PGSC0003DMG400008342 ID=PGSC0003DMT400021507.v4.03 annot-version=v4.03
Sequence

MRPLSSSSPPVLPNDASESGDSAERRLHEAEERLREAIEELQRRQRRARCIYPPCDHADE
SCVANAIGNVCQSFLLSYGVRVGIGILLRAFKLARRQSYSSLLDLKQLVSEKDLIVREEA
CRIGLLFGGFSGSYHALRCLLRKLRRKETPLNAILAGSVAGLSILALDDSNRRRTLALYL
LARLSQCAYNSAKSKNRFHLWGSHWSHGDSLLFALACAQVMYCFIMRPESLPKAYRDFIQ
KTGPVSAPVYKAVKDCCRGSPVDVASLHAYLSKAKGSTTMKLEEFPSIIPCSVIHPGTKS
CLVHDANAAAATFRKTFPLYFSLTFVPFVVLRLQKFMDAPTRTCWYALTGAVRSTTFLSA
FVGIFQAVICCHRKVASKDHKLVYWVAGALSGLSVLLEKKARRGELALYVLPRAADSLWY
ILVNRHLLPDIKNAEVPLFCACMGGIMYYLEHEPDTMAPFLRGLIRRFLASRISNPTPPS
NKGASYTYLHTHDAMKETKMAEIRETETLTAEKYNLESIPGL*

Transcript Sequence

Transcript ID

PGSC0003DMT400021507
Transcript Infomation

pacid=37460085 locus=PGSC0003DMG400008342 ID=PGSC0003DMT400021507.v4.03 annot-version=v4.03
Sequence

ATGCGTCCTCTGTCCTCTTCTTCGCCGCCGGTTTTACCTAACGACGCTTCTGAGAGCGGT
GACTCCGCCGAGCGCCGTCTTCATGAGGCGGAGGAGCGCTTAAGAGAGGCAATTGAAGAG
CTTCAGCGCCGGCAACGTCGTGCCAGGTGTATCTACCCGCCCTGTGACCATGCCGATGAA
TCATGTGTTGCTAACGCAATTGGTAACGTTTGTCAAAGTTTTCTTCTCTCTTACGGTGTG
CGCGTTGGCATCGGAATTCTCCTCCGTGCTTTTAAGCTAGCTCGGCGCCAGTCCTATTCC
TCTCTACTCGATCTCAAGCAACTTGTGTCCGAAAAAGACCTAATTGTAAGAGAGGAAGCA
TGTCGAATTGGTTTGCTCTTTGGGGGATTTAGTGGTTCATATCATGCTCTAAGATGCTTG
CTAAGAAAGCTGAGAAGAAAAGAGACACCCTTAAATGCAATTTTAGCAGGTTCAGTGGCA
GGTCTGTCTATTTTAGCATTAGATGATTCCAACAGGCGGCGGACTCTTGCCTTGTATCTT
CTGGCAAGGCTATCACAGTGCGCGTATAATTCTGCCAAATCCAAGAACCGGTTTCATCTC
TGGGGAAGTCACTGGAGTCATGGGGATTCTTTACTCTTTGCATTGGCATGTGCCCAGGTT
ATGTATTGCTTCATAATGCGTCCTGAGAGCCTTCCAAAAGCATATAGAGATTTCATTCAG
AAGACTGGGCCTGTTTCAGCACCAGTCTACAAAGCTGTTAAGGATTGCTGTAGAGGCTCT
CCAGTTGATGTTGCTTCATTACATGCCTATTTGTCCAAAGCAAAGGGCTCTACTACTATG
AAGTTGGAAGAGTTTCCTTCTATTATCCCATGCTCTGTAATTCACCCTGGGACCAAATCT
TGCTTAGTTCATGATGCTAATGCAGCGGCAGCTACTTTCCGGAAAACATTTCCTCTTTAC
TTCTCTTTGACTTTTGTGCCCTTTGTCGTTCTACGCTTGCAGAAGTTTATGGATGCTCCT
ACACGCACCTGTTGGTATGCTCTTACAGGGGCTGTTCGCTCGACAACCTTCTTGTCCGCT
TTTGTTGGAATCTTTCAGGCTGTCATATGTTGCCACCGGAAGGTGGCATCAAAGGACCAT
AAGCTTGTATATTGGGTAGCTGGGGCCCTCTCAGGCCTATCTGTGTTGCTGGAGAAGAAA
GCTAGACGTGGAGAACTAGCCTTGTATGTTCTTCCTCGAGCTGCAGATTCTTTGTGGTAT
ATATTGGTGAATCGCCATTTGCTTCCGGATATCAAGAATGCTGAGGTGCCCTTGTTTTGT
GCCTGTATGGGTGGTATTATGTACTACCTGGAGCATGAACCAGACACCATGGCTCCCTTC
CTCAGAGGCCTGATCCGCCGCTTCCTTGCAAGCAGAATCAGCAATCCTACTCCTCCATCA
AATAAAGGTGCCTCCTATACATATCTACACACTCACGATGCCATGAAAGAGACAAAAATG
GCAGAAATCCGTGAGACTGAAACTTTAACTGCAGAGAAGTACAACCTTGAATCAATACCA
GGACTTTGA