Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021403
CDS Infomation

pacid=37428214 polypeptide=PGSC0003DMP400014565 locus=PGSC0003DMG400008306 ID=PGSC0003DMT400021403.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAGCAGCAGTTTCCTATGTTGCAGAGCGGCTTATTGATCTTCTCCAGAAAAAA
ATTGTTTTCCTGAAAAACATCCAACAAGGAGTTGAAGCAATGCAAGATGAGCTTGTCAGT
ATGAAGTGTTTCCTGAAAGATGCAGATATGAAGCAAGAGGAAGATGAGGCCGCAACAATC
CGCAATTGGGTATCTGAAATCAGAGCAGTTGCCTACCATGCTGAGGATGTGATTGAAATA
TTCATCCACCAAGTTGAGTCCCAAACACGACAGTGTTTCTTCATCAAGTGTGTCTTCTAT
CCTAAGAAACTATACTGTCTTTACAAAGTAGGGAAGGAGATTGAATCGATTCAGACCAGA
ATTCTTGAAATATCCAACCGTCGTGAAAGATACGACATCAGGCATATTCGAGATGGGGAA
GAGTCAAGCACAACACATGAGAAGCTGTGTGAACTAAGACGCTCCTCGCCCTTGGTTGCC
AACAAGGATTCTGTTGGTCTAGAGAAGCATGTGAGCTCTGTCGTGTCAATCCTTCTGATG
GAGGACAAACGGCTTCGTGTTGCTTCAATTGTTGGTATGGGGGGCGTCGGCAAGACGACT
CTTGCCAAGGAAGTTTATAACCGAACTCAAATCAGAGACAAGTTTGACACTCGGGCATGG
CTTTATGTATCCCAAGATCATAAGCCCATGAAGATCATCAAGGAACTCATTTTACAACTG
GCAAATCCAGAAGAAGATAAAGTGAAGATAGTGGACACGATGGACAAATTGTCAAAGGCC
GGTTTGGATGAAATGCTCCAGAGGCGTTTGAAAGATACATGCTATCTCATTGTTCTTGAT
GACATCTGGACCACAGAAGCATGGGATCTCATTGTTATGTCATTTCCTGACAATGGTAAG
TCAAGTAGATTGCTACTTACCAGCCGCAGTAAGGAGGTTGCCTTGCATGCAGATGCTCAT
ACTACACTCTATGAACATAAAGTATTGAGTAAAGAGGAGAGCTGGGAACTCTTTCTCAAG
AAAGTATTTGCTGTGGATAGAGAGTGTCCACATGACTTGGTGGACGTGGGAAAAGAGATT
CTGGAAAAATGTGATGGGTTGCCACTGGCAATCACCGTCATAGGAGGTCTCTTGGCGGGG
AAGAAGAAGCAAAGAAGTGAGTGGCAGAGAGTACAGCGAGGCCTCAGTTCATACCTTGTC
AAACCTCAAACTTATGGCGTATCAACAATTTTGGCATTGAGTTATCAGGACTTACCTCCC
CATTTAAAATCTTGCTTTCTCTACTTAGGCCTTCTCCAAAAAGGCAGAGACATCCCTGTG
AAGCAACTCATGCATATATGGATTGCCCATGGTCTTATTCATCAAAAGGGAGAACAAACA
TTAGAGGACATTGTGGAGGATTATCTTGATGAGCTCATTGGCAGAAATATGCTTCAAGTA
ATCCTAGTTACAGCAGATGACAGAGTTAAGAGTTGCCGGCTCCATGATCTCCTACGAGAC
TTTTGTATGAGGAAGGCCAAGGAAGAAATGTTTCTGGAGGTAGATAATCCATCTATATCC
CTCTCTGGATCTCGGCACCGTGTCCTTTACTCTCCAGTAAAGAGGTACAAATATTTGGGA
AATTCAAAATCATATATAAGATCTCTTCTATCCTTTGATTCATCTGCTAAACTAGTTAAC
CTTGATTGTATTTGTACAAGTAGTTTCAAACTTCTCAGAGTGCTATACATAGACTCTCCT
GGTTTAAAGGTGATCTCAGATAGTATTGGGAAACTATGTTCCTTGAAGTACTTAGGCATA
GGATGGAAGACATGTATTAAGAAGTTTCCCCATTCGATAAGTCGTTTGCATAACTTGGAA
ACAATAGATATGCCCATGTCTAGGTTTTATTCTGTGAAAGTTCCTAATGTCTTGTGGAAG
TTAGAGAATTTACGGCATATACTTGGTTACATAAATTCCCCCCGCCTATTGAAGATTGAC
CTACCTAAAAATCTCCAAACTCTAGGCAGCATACCTGTTCATCACTGGATGCACCATGAA
AACCTGACAAGAATGACTCATCTCCAAAAAGTTGGTTTACTCATTGGAAGTGCTGATAAC
CTAGACATGAATCGATTATGTGATTCACTTGCAGAGCTTGAGAGCCTTCAATCCTTGTGT
TTGGAAGTAGAGGGTAGCATGAAAATACCTTTGGTTGCTGGTTTATCTAAGTTGAGTCAT
GTTGTCAAGCTTAAGTTGAAGGGACGCTTAGCATTAATACCAATTAATTCTTGTGTATTT
CCATCTAAGCTTTGTCAGCTGACTTTGGTGAACTCGAACCTCCATCCATATTCAATCCAA
TTATTGGAGAAGTTAACCAACTTGTCAGTTCTAAAACTAGTTAAAGCCTTTTATCATTAT
GATTGGTATCAAGAGTATAGGATAAGAATATCGGAGAATGGGTTTCGTGGACTCAAGTTT
CTCAGGATGGATCAACTAATGTATATGAAAGCAATGAATCTAGGGAAAGGTGCAATGGCT
GGACTCAAATGCCTGCAAATCTTCAAATGCTACTCGTTGACGAGGCTCCCAGGAGAGTTG
ATATCATTGTCTAACCTTGAGAAGCTGGAGATTCGAGGAATGCCTAAAGCATTTATTGCT
AGACTTCAAGTTTCAGATTTGCACAAACTCCAACACATTCCCAACGTTGTGGTTGGACAT
CCAAGTACAGATTATGAAGAATGGATCCAACAACTGAAGCGTAGAGATTATATGGGTACA
AGTACAACAACTATGGAAAGAAGGGCCAAGAAAATGGCACAGGAAATTTTTAAAGAACAT
TTCCCTGAGGAGTCATTTTGGTTGATTCCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400014565
PEP Infomation

pacid=37428214 transcript=PGSC0003DMT400021403 locus=PGSC0003DMG400008306 ID=PGSC0003DMT400021403.v4.03 annot-version=v4.03
Sequence

MAEAAVSYVAERLIDLLQKKIVFLKNIQQGVEAMQDELVSMKCFLKDADMKQEEDEAATI
RNWVSEIRAVAYHAEDVIEIFIHQVESQTRQCFFIKCVFYPKKLYCLYKVGKEIESIQTR
ILEISNRRERYDIRHIRDGEESSTTHEKLCELRRSSPLVANKDSVGLEKHVSSVVSILLM
EDKRLRVASIVGMGGVGKTTLAKEVYNRTQIRDKFDTRAWLYVSQDHKPMKIIKELILQL
ANPEEDKVKIVDTMDKLSKAGLDEMLQRRLKDTCYLIVLDDIWTTEAWDLIVMSFPDNGK
SSRLLLTSRSKEVALHADAHTTLYEHKVLSKEESWELFLKKVFAVDRECPHDLVDVGKEI
LEKCDGLPLAITVIGGLLAGKKKQRSEWQRVQRGLSSYLVKPQTYGVSTILALSYQDLPP
HLKSCFLYLGLLQKGRDIPVKQLMHIWIAHGLIHQKGEQTLEDIVEDYLDELIGRNMLQV
ILVTADDRVKSCRLHDLLRDFCMRKAKEEMFLEVDNPSISLSGSRHRVLYSPVKRYKYLG
NSKSYIRSLLSFDSSAKLVNLDCICTSSFKLLRVLYIDSPGLKVISDSIGKLCSLKYLGI
GWKTCIKKFPHSISRLHNLETIDMPMSRFYSVKVPNVLWKLENLRHILGYINSPRLLKID
LPKNLQTLGSIPVHHWMHHENLTRMTHLQKVGLLIGSADNLDMNRLCDSLAELESLQSLC
LEVEGSMKIPLVAGLSKLSHVVKLKLKGRLALIPINSCVFPSKLCQLTLVNSNLHPYSIQ
LLEKLTNLSVLKLVKAFYHYDWYQEYRIRISENGFRGLKFLRMDQLMYMKAMNLGKGAMA
GLKCLQIFKCYSLTRLPGELISLSNLEKLEIRGMPKAFIARLQVSDLHKLQHIPNVVVGH
PSTDYEEWIQQLKRRDYMGTSTTTMERRAKKMAQEIFKEHFPEESFWLIP*

Transcript Sequence

Transcript ID

PGSC0003DMT400021403
Transcript Infomation

pacid=37428214 locus=PGSC0003DMG400008306 ID=PGSC0003DMT400021403.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAGCAGCAGTTTCCTATGTTGCAGAGCGGCTTATTGATCTTCTCCAGAAAAAA
ATTGTTTTCCTGAAAAACATCCAACAAGGAGTTGAAGCAATGCAAGATGAGCTTGTCAGT
ATGAAGTGTTTCCTGAAAGATGCAGATATGAAGCAAGAGGAAGATGAGGCCGCAACAATC
CGCAATTGGGTATCTGAAATCAGAGCAGTTGCCTACCATGCTGAGGATGTGATTGAAATA
TTCATCCACCAAGTTGAGTCCCAAACACGACAGTGTTTCTTCATCAAGTGTGTCTTCTAT
CCTAAGAAACTATACTGTCTTTACAAAGTAGGGAAGGAGATTGAATCGATTCAGACCAGA
ATTCTTGAAATATCCAACCGTCGTGAAAGATACGACATCAGGCATATTCGAGATGGGGAA
GAGTCAAGCACAACACATGAGAAGCTGTGTGAACTAAGACGCTCCTCGCCCTTGGTTGCC
AACAAGGATTCTGTTGGTCTAGAGAAGCATGTGAGCTCTGTCGTGTCAATCCTTCTGATG
GAGGACAAACGGCTTCGTGTTGCTTCAATTGTTGGTATGGGGGGCGTCGGCAAGACGACT
CTTGCCAAGGAAGTTTATAACCGAACTCAAATCAGAGACAAGTTTGACACTCGGGCATGG
CTTTATGTATCCCAAGATCATAAGCCCATGAAGATCATCAAGGAACTCATTTTACAACTG
GCAAATCCAGAAGAAGATAAAGTGAAGATAGTGGACACGATGGACAAATTGTCAAAGGCC
GGTTTGGATGAAATGCTCCAGAGGCGTTTGAAAGATACATGCTATCTCATTGTTCTTGAT
GACATCTGGACCACAGAAGCATGGGATCTCATTGTTATGTCATTTCCTGACAATGGTAAG
TCAAGTAGATTGCTACTTACCAGCCGCAGTAAGGAGGTTGCCTTGCATGCAGATGCTCAT
ACTACACTCTATGAACATAAAGTATTGAGTAAAGAGGAGAGCTGGGAACTCTTTCTCAAG
AAAGTATTTGCTGTGGATAGAGAGTGTCCACATGACTTGGTGGACGTGGGAAAAGAGATT
CTGGAAAAATGTGATGGGTTGCCACTGGCAATCACCGTCATAGGAGGTCTCTTGGCGGGG
AAGAAGAAGCAAAGAAGTGAGTGGCAGAGAGTACAGCGAGGCCTCAGTTCATACCTTGTC
AAACCTCAAACTTATGGCGTATCAACAATTTTGGCATTGAGTTATCAGGACTTACCTCCC
CATTTAAAATCTTGCTTTCTCTACTTAGGCCTTCTCCAAAAAGGCAGAGACATCCCTGTG
AAGCAACTCATGCATATATGGATTGCCCATGGTCTTATTCATCAAAAGGGAGAACAAACA
TTAGAGGACATTGTGGAGGATTATCTTGATGAGCTCATTGGCAGAAATATGCTTCAAGTA
ATCCTAGTTACAGCAGATGACAGAGTTAAGAGTTGCCGGCTCCATGATCTCCTACGAGAC
TTTTGTATGAGGAAGGCCAAGGAAGAAATGTTTCTGGAGGTAGATAATCCATCTATATCC
CTCTCTGGATCTCGGCACCGTGTCCTTTACTCTCCAGTAAAGAGGTACAAATATTTGGGA
AATTCAAAATCATATATAAGATCTCTTCTATCCTTTGATTCATCTGCTAAACTAGTTAAC
CTTGATTGTATTTGTACAAGTAGTTTCAAACTTCTCAGAGTGCTATACATAGACTCTCCT
GGTTTAAAGGTGATCTCAGATAGTATTGGGAAACTATGTTCCTTGAAGTACTTAGGCATA
GGATGGAAGACATGTATTAAGAAGTTTCCCCATTCGATAAGTCGTTTGCATAACTTGGAA
ACAATAGATATGCCCATGTCTAGGTTTTATTCTGTGAAAGTTCCTAATGTCTTGTGGAAG
TTAGAGAATTTACGGCATATACTTGGTTACATAAATTCCCCCCGCCTATTGAAGATTGAC
CTACCTAAAAATCTCCAAACTCTAGGCAGCATACCTGTTCATCACTGGATGCACCATGAA
AACCTGACAAGAATGACTCATCTCCAAAAAGTTGGTTTACTCATTGGAAGTGCTGATAAC
CTAGACATGAATCGATTATGTGATTCACTTGCAGAGCTTGAGAGCCTTCAATCCTTGTGT
TTGGAAGTAGAGGGTAGCATGAAAATACCTTTGGTTGCTGGTTTATCTAAGTTGAGTCAT
GTTGTCAAGCTTAAGTTGAAGGGACGCTTAGCATTAATACCAATTAATTCTTGTGTATTT
CCATCTAAGCTTTGTCAGCTGACTTTGGTGAACTCGAACCTCCATCCATATTCAATCCAA
TTATTGGAGAAGTTAACCAACTTGTCAGTTCTAAAACTAGTTAAAGCCTTTTATCATTAT
GATTGGTATCAAGAGTATAGGATAAGAATATCGGAGAATGGGTTTCGTGGACTCAAGTTT
CTCAGGATGGATCAACTAATGTATATGAAAGCAATGAATCTAGGGAAAGGTGCAATGGCT
GGACTCAAATGCCTGCAAATCTTCAAATGCTACTCGTTGACGAGGCTCCCAGGAGAGTTG
ATATCATTGTCTAACCTTGAGAAGCTGGAGATTCGAGGAATGCCTAAAGCATTTATTGCT
AGACTTCAAGTTTCAGATTTGCACAAACTCCAACACATTCCCAACGTTGTGGTTGGACAT
CCAAGTACAGATTATGAAGAATGGATCCAACAACTGAAGCGTAGAGATTATATGGGTACA
AGTACAACAACTATGGAAAGAAGGGCCAAGAAAATGGCACAGGAAATTTTTAAAGAACAT
TTCCCTGAGGAGTCATTTTGGTTGATTCCTTAG