Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021384
CDS Infomation

pacid=37426956 polypeptide=PGSC0003DMP400014552 locus=PGSC0003DMG400008296 ID=PGSC0003DMT400021384.v4.03 annot-version=v4.03
Sequence

ATGATGTCAAAGACAGTTGTATATGCATTAGCCATATTTTCTATTACCTTTCTCATACCT
CTGTCATCTGGGCAACATCCAAGCTTTGAAGTTGAAGTTGCTGCTTTGAAAGCTTTCAAG
AGCTCAATCTCTGACGACCCTTTCGGTGCACTTGTGGATTGGACGGATGCAAATCACCAT
TGCAACTGGTCTGGAATCATATGTGATCCTTCTTCAAGCCATGTCATCAACATTTCGCTT
ATTGAGACGCAGCTCAAAGGCGAAATTTCTCCGTTTCTAGGAAACCTCTCCAAACTCCAG
GTTCTTGATCTAACTTTGAATTCATTTACTGGAAATATCCCACCCCAGCTGGGGTATTGC
ACAGACCTGGTTGAGCTCGTTTTTTACCAAAACTCTCTTTTTGGTGAAATTCCTGCCGAG
CTGGGAAACCTAAAAAAACTGCAGTATATAGATTTTGGAAATAACTTTCTAAATGGGAGT
ATACCTGATAGTATATGCAACTGCACTGAATTGTCGTTAGTAGGCTTCATCAACAACAAT
CTCACAGGCAAATTACCGTCTGAAATTGGTAAGTTGGCCAATCTTCAGTTGTTTGTAGCT
TATACAAACAATTTGGTTGGTTCTATTCCTACCTCCATTGGAATGCTTACAGCTTTGCAA
ACCCTTGATCTGAGCGAAAACCAGTTATCTGGACCTATACCATCAGCAATTGGCAACTTG
TCAAGTTTAGGAATTCTTCAGTTACATCTCAACTCTCTTTCTGGGAAAATCCCATCTGAA
CTTGGCCTCTGTATCAATCTTTTTACCTTGAACATGTATACTAATCAATTTACTGGAAGC
ATACCTCCTGAGCTTGGAAATTTAGAAAACTTGCAAGTGCTCAGATTGCATAACAATAAG
TTGAACTCCAGTATACCTGCCTCAATATTCCACCTGAAGTCATTAACTCATTTAGGACTC
TCACAGAATGAACTAACTGGTAATATTCCTCCCGAGTTGGGATCTTTAACGTCACTAGAA
GTGCTTACCCTTCACTCAAATAGGTTATCGGGGGAGATCCCATCAACTATAACAAACCTG
GCAAACTTGACATATTTGTCTTTGGGCTTTAATTTATTGACTGGATCACTTCCATCGGAA
TTTGGGTTACTCTATAATCTGAAAAATCTAACTGCAAATGATAACCTCCTGGAAGGATCT
ATTCCATCGAGCATAACAAATTGTTCTCATCTTCTTGTTTTAACCCTCGCTTATAATAGA
ATAGCGGGGAAAATACCAAATGGGTTGGGGCAATTGTCCAATCTTACATTTTTGTCTTTG
GGATCAAACAAAATGATGGGGGAGATTCCTGATGATCTCTTCAACTGTTCAATGCTTGAA
ATTCTAGATCTGAGTGATAACAATTTCAGCGGGAAACTCAAATCAATGATTGGCAGACTC
TCTAAACTTCGAGTTTTAAGAGCTCGTACTAATTCATTTCTTGGGCCAATCCCACCAGAG
ATTGGTAAACTGAGTCAACTCGTGGATTTAGTGCTTCACGAAAACAGTTTCTCAGGTGCG
ATACCACCAGAAATTTCAATGCTTTCAAACCTTCAGGGTCTTTTGCTATCTGACAACAAG
CTGGAAGGTGAACTTCCTGTGCAGCTTTTTGAGCTCAAACAGCTCAATGAACTCCGGCTG
AAGAACAATAATTTCTTTGGTCCACTACCGCAACATATATCCAAACTAGAATCACTGTCG
CTCATGGATCTGAGTGGAAATAAGCTTAATGGCACAATCCCAGAGAGCATGGCGAGCCTC
CGCAGATTGATGACCGTAGATCTTTCACACAACCTTCTTACCGGAACTATTCCCAGAGCA
GTACTTGCCAGCATGAGAAGTATGCAACTTTACTTGAACGTTTCCAGCAATTTGTTGCAC
GGAGAGATCCCAGATGAGATAGGCGTGTTAGAAATGGTTCAAGAGATTGACATGTCAAAT
AATAATCTGTCAGGCAGCATTCCCAGATCCCTAGAACGCTGCAAAAACTTATTTTCACTG
GACCTATCAGGAAACATGCTCTCTGGTCCTGCTCCAGGTGAAATTTTCACCAAATTAAGA
GAGCTTGTGTTCTTGAACCTCTCAAGGAACAGATTAGAAGGTAGTCTTCCTGAAATAGCA
GGATTATCACATCTTCGCTCTCTTGATGTTTCACAAAACAAGTTCAATGGAATCATTCCC
GAGAGATTTGCCAATATGACTGCATTGAAATATCTCAACCTTTCTTTCAACCAACTTGAA
GGTCACATTCCAAAGGGGGGTGTATTCAACAATATAAGGTCGGAGGATTTACTGGGAAAT
CCATCTCTATGTGGAACAAAGTTTCTCAGTCCATGCAACATAAAAAGAAACCGAACAAGT
TCTCATGGTTTTTCCAAGAAAACCTGGATCATACTTGCAGCACTTGGATCTGTTTTCAGT
CTCATTCTTCTTGTCCTGGGAATAATTTTATTTCATCGGTACATGAAGAAGAAGAAAAAA
GTGAATGACGCGGAGGATACAAATCCAAAGTATACCGCAGCATTGAGCCTCCAGAGATTT
TATCAAAAGGATTTGGAACATGCTACCAATAATTTCAGTCCGGAAAACATTATTGGAGCC
AGCAGTTTAAGTACTGTGTACAAAGGTACACTGGAAGATGGGAAGATTGTAGCAGTTAAG
AAGCTGAATCACCAGTTCTCAGCAGAATCTGGTAAATGCTTTGATAGGGAAGTCAAGACT
CTGAGCCAACTCAGACACAGGAACCTAGTTAAGGTGCTAGGTTACGCTTGGGAAAGCAAG
AAGCTAAGGGCTTTAGTTTTAGAATACATGGAGAATGGGAACTTGGACAACATGATTTAT
GGTCAAGTGGAGGATGACTGGACGTTGTCCAATAGGATTGATATTTTAGTTTCAGTTGCA
AGTGGACTGTCATACCTGCATTCAGGCTATGATTTTCCAATAGTGCACTGCGACATGAAG
CCTTCAAATATTCTTCTGGATAAAAATATGGAAGCACATGTGAGTGACTTTGGGACAGCT
AGGATGTTGGGTATTCATCTCCAGGATGGGAGCAGCATATCATCAGCATCCGCATTTGAA
GGAACTATTGGTTACATGGCGCCAGAGTTTGCATATATGAGGAAAGTGACCACAAAAGTA
GATGTATTCAGCTTTGGTGTCATTGTGATGGAGATCATTACAAAAAGAAGGCCAACAAGT
CTTACCGGAGCAGATGAATTACCAATGACTTTGCATCAAATTGTTCAGAATGCCCTTGCG
AATGGCATAAACAAGCTAGTTCAGATTGTGGATCCTAATCTAGCTTCATATGTCTCCAAG
AAACAGGATGTACTAGAGGGACTTCTTAACTTGGCTTTGTCCTGCACCTCTGCTGATCCT
GAAGATAGACCTGACATGGAACAAGTTCTGTCTTCTCTTTCAAAGCTAAGTAAGATGGAC
TGCATGCCTTCACATTTGGTAAAAGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400014552
PEP Infomation

pacid=37426956 transcript=PGSC0003DMT400021384 locus=PGSC0003DMG400008296 ID=PGSC0003DMT400021384.v4.03 annot-version=v4.03
Sequence

MMSKTVVYALAIFSITFLIPLSSGQHPSFEVEVAALKAFKSSISDDPFGALVDWTDANHH
CNWSGIICDPSSSHVINISLIETQLKGEISPFLGNLSKLQVLDLTLNSFTGNIPPQLGYC
TDLVELVFYQNSLFGEIPAELGNLKKLQYIDFGNNFLNGSIPDSICNCTELSLVGFINNN
LTGKLPSEIGKLANLQLFVAYTNNLVGSIPTSIGMLTALQTLDLSENQLSGPIPSAIGNL
SSLGILQLHLNSLSGKIPSELGLCINLFTLNMYTNQFTGSIPPELGNLENLQVLRLHNNK
LNSSIPASIFHLKSLTHLGLSQNELTGNIPPELGSLTSLEVLTLHSNRLSGEIPSTITNL
ANLTYLSLGFNLLTGSLPSEFGLLYNLKNLTANDNLLEGSIPSSITNCSHLLVLTLAYNR
IAGKIPNGLGQLSNLTFLSLGSNKMMGEIPDDLFNCSMLEILDLSDNNFSGKLKSMIGRL
SKLRVLRARTNSFLGPIPPEIGKLSQLVDLVLHENSFSGAIPPEISMLSNLQGLLLSDNK
LEGELPVQLFELKQLNELRLKNNNFFGPLPQHISKLESLSLMDLSGNKLNGTIPESMASL
RRLMTVDLSHNLLTGTIPRAVLASMRSMQLYLNVSSNLLHGEIPDEIGVLEMVQEIDMSN
NNLSGSIPRSLERCKNLFSLDLSGNMLSGPAPGEIFTKLRELVFLNLSRNRLEGSLPEIA
GLSHLRSLDVSQNKFNGIIPERFANMTALKYLNLSFNQLEGHIPKGGVFNNIRSEDLLGN
PSLCGTKFLSPCNIKRNRTSSHGFSKKTWIILAALGSVFSLILLVLGIILFHRYMKKKKK
VNDAEDTNPKYTAALSLQRFYQKDLEHATNNFSPENIIGASSLSTVYKGTLEDGKIVAVK
KLNHQFSAESGKCFDREVKTLSQLRHRNLVKVLGYAWESKKLRALVLEYMENGNLDNMIY
GQVEDDWTLSNRIDILVSVASGLSYLHSGYDFPIVHCDMKPSNILLDKNMEAHVSDFGTA
RMLGIHLQDGSSISSASAFEGTIGYMAPEFAYMRKVTTKVDVFSFGVIVMEIITKRRPTS
LTGADELPMTLHQIVQNALANGINKLVQIVDPNLASYVSKKQDVLEGLLNLALSCTSADP
EDRPDMEQVLSSLSKLSKMDCMPSHLVKD*

Transcript Sequence

Transcript ID

PGSC0003DMT400021384
Transcript Infomation

pacid=37426956 locus=PGSC0003DMG400008296 ID=PGSC0003DMT400021384.v4.03 annot-version=v4.03
Sequence

ATGATGTCAAAGACAGTTGTATATGCATTAGCCATATTTTCTATTACCTTTCTCATACCT
CTGTCATCTGGGCAACATCCAAGCTTTGAAGTTGAAGTTGCTGCTTTGAAAGCTTTCAAG
AGCTCAATCTCTGACGACCCTTTCGGTGCACTTGTGGATTGGACGGATGCAAATCACCAT
TGCAACTGGTCTGGAATCATATGTGATCCTTCTTCAAGCCATGTCATCAACATTTCGCTT
ATTGAGACGCAGCTCAAAGGCGAAATTTCTCCGTTTCTAGGAAACCTCTCCAAACTCCAG
GTTCTTGATCTAACTTTGAATTCATTTACTGGAAATATCCCACCCCAGCTGGGGTATTGC
ACAGACCTGGTTGAGCTCGTTTTTTACCAAAACTCTCTTTTTGGTGAAATTCCTGCCGAG
CTGGGAAACCTAAAAAAACTGCAGTATATAGATTTTGGAAATAACTTTCTAAATGGGAGT
ATACCTGATAGTATATGCAACTGCACTGAATTGTCGTTAGTAGGCTTCATCAACAACAAT
CTCACAGGCAAATTACCGTCTGAAATTGGTAAGTTGGCCAATCTTCAGTTGTTTGTAGCT
TATACAAACAATTTGGTTGGTTCTATTCCTACCTCCATTGGAATGCTTACAGCTTTGCAA
ACCCTTGATCTGAGCGAAAACCAGTTATCTGGACCTATACCATCAGCAATTGGCAACTTG
TCAAGTTTAGGAATTCTTCAGTTACATCTCAACTCTCTTTCTGGGAAAATCCCATCTGAA
CTTGGCCTCTGTATCAATCTTTTTACCTTGAACATGTATACTAATCAATTTACTGGAAGC
ATACCTCCTGAGCTTGGAAATTTAGAAAACTTGCAAGTGCTCAGATTGCATAACAATAAG
TTGAACTCCAGTATACCTGCCTCAATATTCCACCTGAAGTCATTAACTCATTTAGGACTC
TCACAGAATGAACTAACTGGTAATATTCCTCCCGAGTTGGGATCTTTAACGTCACTAGAA
GTGCTTACCCTTCACTCAAATAGGTTATCGGGGGAGATCCCATCAACTATAACAAACCTG
GCAAACTTGACATATTTGTCTTTGGGCTTTAATTTATTGACTGGATCACTTCCATCGGAA
TTTGGGTTACTCTATAATCTGAAAAATCTAACTGCAAATGATAACCTCCTGGAAGGATCT
ATTCCATCGAGCATAACAAATTGTTCTCATCTTCTTGTTTTAACCCTCGCTTATAATAGA
ATAGCGGGGAAAATACCAAATGGGTTGGGGCAATTGTCCAATCTTACATTTTTGTCTTTG
GGATCAAACAAAATGATGGGGGAGATTCCTGATGATCTCTTCAACTGTTCAATGCTTGAA
ATTCTAGATCTGAGTGATAACAATTTCAGCGGGAAACTCAAATCAATGATTGGCAGACTC
TCTAAACTTCGAGTTTTAAGAGCTCGTACTAATTCATTTCTTGGGCCAATCCCACCAGAG
ATTGGTAAACTGAGTCAACTCGTGGATTTAGTGCTTCACGAAAACAGTTTCTCAGGTGCG
ATACCACCAGAAATTTCAATGCTTTCAAACCTTCAGGGTCTTTTGCTATCTGACAACAAG
CTGGAAGGTGAACTTCCTGTGCAGCTTTTTGAGCTCAAACAGCTCAATGAACTCCGGCTG
AAGAACAATAATTTCTTTGGTCCACTACCGCAACATATATCCAAACTAGAATCACTGTCG
CTCATGGATCTGAGTGGAAATAAGCTTAATGGCACAATCCCAGAGAGCATGGCGAGCCTC
CGCAGATTGATGACCGTAGATCTTTCACACAACCTTCTTACCGGAACTATTCCCAGAGCA
GTACTTGCCAGCATGAGAAGTATGCAACTTTACTTGAACGTTTCCAGCAATTTGTTGCAC
GGAGAGATCCCAGATGAGATAGGCGTGTTAGAAATGGTTCAAGAGATTGACATGTCAAAT
AATAATCTGTCAGGCAGCATTCCCAGATCCCTAGAACGCTGCAAAAACTTATTTTCACTG
GACCTATCAGGAAACATGCTCTCTGGTCCTGCTCCAGGTGAAATTTTCACCAAATTAAGA
GAGCTTGTGTTCTTGAACCTCTCAAGGAACAGATTAGAAGGTAGTCTTCCTGAAATAGCA
GGATTATCACATCTTCGCTCTCTTGATGTTTCACAAAACAAGTTCAATGGAATCATTCCC
GAGAGATTTGCCAATATGACTGCATTGAAATATCTCAACCTTTCTTTCAACCAACTTGAA
GGTCACATTCCAAAGGGGGGTGTATTCAACAATATAAGGTCGGAGGATTTACTGGGAAAT
CCATCTCTATGTGGAACAAAGTTTCTCAGTCCATGCAACATAAAAAGAAACCGAACAAGT
TCTCATGGTTTTTCCAAGAAAACCTGGATCATACTTGCAGCACTTGGATCTGTTTTCAGT
CTCATTCTTCTTGTCCTGGGAATAATTTTATTTCATCGGTACATGAAGAAGAAGAAAAAA
GTGAATGACGCGGAGGATACAAATCCAAAGTATACCGCAGCATTGAGCCTCCAGAGATTT
TATCAAAAGGATTTGGAACATGCTACCAATAATTTCAGTCCGGAAAACATTATTGGAGCC
AGCAGTTTAAGTACTGTGTACAAAGGTACACTGGAAGATGGGAAGATTGTAGCAGTTAAG
AAGCTGAATCACCAGTTCTCAGCAGAATCTGGTAAATGCTTTGATAGGGAAGTCAAGACT
CTGAGCCAACTCAGACACAGGAACCTAGTTAAGGTGCTAGGTTACGCTTGGGAAAGCAAG
AAGCTAAGGGCTTTAGTTTTAGAATACATGGAGAATGGGAACTTGGACAACATGATTTAT
GGTCAAGTGGAGGATGACTGGACGTTGTCCAATAGGATTGATATTTTAGTTTCAGTTGCA
AGTGGACTGTCATACCTGCATTCAGGCTATGATTTTCCAATAGTGCACTGCGACATGAAG
CCTTCAAATATTCTTCTGGATAAAAATATGGAAGCACATGTGAGTGACTTTGGGACAGCT
AGGATGTTGGGTATTCATCTCCAGGATGGGAGCAGCATATCATCAGCATCCGCATTTGAA
GGAACTATTGGTTACATGGCGCCAGAGTTTGCATATATGAGGAAAGTGACCACAAAAGTA
GATGTATTCAGCTTTGGTGTCATTGTGATGGAGATCATTACAAAAAGAAGGCCAACAAGT
CTTACCGGAGCAGATGAATTACCAATGACTTTGCATCAAATTGTTCAGAATGCCCTTGCG
AATGGCATAAACAAGCTAGTTCAGATTGTGGATCCTAATCTAGCTTCATATGTCTCCAAG
AAACAGGATGTACTAGAGGGACTTCTTAACTTGGCTTTGTCCTGCACCTCTGCTGATCCT
GAAGATAGACCTGACATGGAACAAGTTCTGTCTTCTCTTTCAAAGCTAAGTAAGATGGAC
TGCATGCCTTCACATTTGGTAAAAGATTAA