Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021327
CDS Infomation

pacid=37479352 polypeptide=PGSC0003DMP400014510 locus=PGSC0003DMG400008269 ID=PGSC0003DMT400021327.v4.03 annot-version=v4.03
Sequence

ATGGAGCTGCGTTGCTTGCAGTCACTCAATATACCTCCAACTGGTTTAGCAGAGAAGCCA
TTTTTGTGTGGACAGCCAATTACATTGATTCACACTAGCACTAAAAGAGGCCCAAATTCC
AAGAACCTTAAGCCCCTTCGTTTCAGAGCTCAAATTTCTGCAAAAATTAGCTCATTGGAA
CCTCAAGGAACTGCAAAAGATGTCAAATCAAAAGATGGAAATCTTGTTTTTGTTGCTGGT
GCAACCGGTAGGGTTGGTTCTCGGACTGTAAGGGAGCTTCTGAAATTAGGCTTTAAAGTT
CGAGCTGGAGTTCGAAGTGCTCAAAGAGCTCAACCTCTTGTCAAAAGTGTTGAGCAGATA
AAAATTGAGAATACTACGGATGGAGGAGCAAAAGCTATAGAGAAGCTTGAAATTGTGGAA
TGCGATTTGGAGAAAAGTGATCAGATTAGGCCTGCACTGGGCGATGCATCAATTGTTATA
TGTTGCATTGGTGCCAGTGAAAAGGAGATCTTTGATGTTACTGGACCATATCGAATTGAT
TACCTGGCCACTAAGAACCTTATTGATGCAGCAACCGTTGCAAAAGTTGACCACTTTATC
TTGCTCACATCTTTGGGAACAAACAAGGTCGGTTTTCCTGCAGCAATTCTCAATTTGTTT
TGGGGAGTCCTCCTTTGGAAAAGGAAAGCAGAAGAGGCACTGCTTGCTAGTGGGCTTCCT
TATACTATTGTGAGGCCTGGAGGAATGGAACGTCCCACTGATTCTTTCAAAGAAACTCAC
AATATTACTATTTCGGAGGAAGATACTTTATTTGGTGGTCTCGTGTCTAACCTTCAGGTG
GCAGAACTAATGGCGGTTATGGCCAAAAACCGTAGCCTTTCATACTGTAAAGTGGTTGAA
GTAGTTGCAGAAACAACAGCACCGTTAACCCCCATGGAGGACCTTCTTGCAAAAATTCCC
TGCCAACGTGTTGAGGTTTCCCCACCCAAGGAAACTGGTGATTTACAGAAATCTGCAACT
CCAAGCAGTACTACGTCTGAGATCCCTGATGCCTCGCTCGAGAAAAAACCTGCTGAAACA
AAGTTGAAAGCAGCAGCACCACTCTCTCCATTTACTGCTTATGCAGATCTTAAACCGCCT
ACATCTCCTAGTCCAATTCCTCCCGGTGGTCGTCAAGAAGGTACAATTGGAGCAGAAGAT
AGCAAACCCACAAAAGAAGCCTCTTCTGTTGTTGATTATGCTTTTGACAAAGCAGAATTG
CTGACTACAAGGCCTTCATCTCCATATGCTGCTTATGAAGATTTAAAGCCACCTACATCT
CCTAGTCCAAATCCTCCCGGAGGTCATCAAGAAGGTGCAAGTGGAGCAGAAGATAGCGAA
CCCACTAAGGCAGCCTCTTCTGTTGTTGATTCTACTTTTGACAAAGCAGAATTGCTGACT
ACAAGTTATGAAGATCTAAAACCACCTACATCCCCTAGTACAAATCCTCCCGGAGGTCGT
CAAGAAGGTGCAAGTGGAGCAGAAAATAGCAAACCCACTACGGAAGCCTCTTCTGTTTAT
TTATTTACTTTTGACAAAGCAGAATTGCTGACTACAAGGCCTTTGTCTCCATACACTGCT
TATGAAGATTTAAAGCCACCTACATCTCCAAGTCCAAGACCCAGTGGTTTGAAATCCTCA
GCAACCGTGGAAGTAACATCACCAGTTACTGGAGGCAATGATGTGGCAATCAATAGTGCT
ACCAATTCTGCCAAGGAGGATTCGTCAAAAAATTCAGCTTTCTGTCATTCTCCCTACCCA
GCGTATGAGGACTTCAAGCCTCCAAGTTCTCCAACGCCATCTTTCAATAAAATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400014510
PEP Infomation

pacid=37479352 transcript=PGSC0003DMT400021327 locus=PGSC0003DMG400008269 ID=PGSC0003DMT400021327.v4.03 annot-version=v4.03
Sequence

MELRCLQSLNIPPTGLAEKPFLCGQPITLIHTSTKRGPNSKNLKPLRFRAQISAKISSLE
PQGTAKDVKSKDGNLVFVAGATGRVGSRTVRELLKLGFKVRAGVRSAQRAQPLVKSVEQI
KIENTTDGGAKAIEKLEIVECDLEKSDQIRPALGDASIVICCIGASEKEIFDVTGPYRID
YLATKNLIDAATVAKVDHFILLTSLGTNKVGFPAAILNLFWGVLLWKRKAEEALLASGLP
YTIVRPGGMERPTDSFKETHNITISEEDTLFGGLVSNLQVAELMAVMAKNRSLSYCKVVE
VVAETTAPLTPMEDLLAKIPCQRVEVSPPKETGDLQKSATPSSTTSEIPDASLEKKPAET
KLKAAAPLSPFTAYADLKPPTSPSPIPPGGRQEGTIGAEDSKPTKEASSVVDYAFDKAEL
LTTRPSSPYAAYEDLKPPTSPSPNPPGGHQEGASGAEDSEPTKAASSVVDSTFDKAELLT
TSYEDLKPPTSPSTNPPGGRQEGASGAENSKPTTEASSVYLFTFDKAELLTTRPLSPYTA
YEDLKPPTSPSPRPSGLKSSATVEVTSPVTGGNDVAINSATNSAKEDSSKNSAFCHSPYP
AYEDFKPPSSPTPSFNKM*

Transcript Sequence

Transcript ID

PGSC0003DMT400021327
Transcript Infomation

pacid=37479352 locus=PGSC0003DMG400008269 ID=PGSC0003DMT400021327.v4.03 annot-version=v4.03
Sequence

ATGGAGCTGCGTTGCTTGCAGTCACTCAATATACCTCCAACTGGTTTAGCAGAGAAGCCA
TTTTTGTGTGGACAGCCAATTACATTGATTCACACTAGCACTAAAAGAGGCCCAAATTCC
AAGAACCTTAAGCCCCTTCGTTTCAGAGCTCAAATTTCTGCAAAAATTAGCTCATTGGAA
CCTCAAGGAACTGCAAAAGATGTCAAATCAAAAGATGGAAATCTTGTTTTTGTTGCTGGT
GCAACCGGTAGGGTTGGTTCTCGGACTGTAAGGGAGCTTCTGAAATTAGGCTTTAAAGTT
CGAGCTGGAGTTCGAAGTGCTCAAAGAGCTCAACCTCTTGTCAAAAGTGTTGAGCAGATA
AAAATTGAGAATACTACGGATGGAGGAGCAAAAGCTATAGAGAAGCTTGAAATTGTGGAA
TGCGATTTGGAGAAAAGTGATCAGATTAGGCCTGCACTGGGCGATGCATCAATTGTTATA
TGTTGCATTGGTGCCAGTGAAAAGGAGATCTTTGATGTTACTGGACCATATCGAATTGAT
TACCTGGCCACTAAGAACCTTATTGATGCAGCAACCGTTGCAAAAGTTGACCACTTTATC
TTGCTCACATCTTTGGGAACAAACAAGGTCGGTTTTCCTGCAGCAATTCTCAATTTGTTT
TGGGGAGTCCTCCTTTGGAAAAGGAAAGCAGAAGAGGCACTGCTTGCTAGTGGGCTTCCT
TATACTATTGTGAGGCCTGGAGGAATGGAACGTCCCACTGATTCTTTCAAAGAAACTCAC
AATATTACTATTTCGGAGGAAGATACTTTATTTGGTGGTCTCGTGTCTAACCTTCAGGTG
GCAGAACTAATGGCGGTTATGGCCAAAAACCGTAGCCTTTCATACTGTAAAGTGGTTGAA
GTAGTTGCAGAAACAACAGCACCGTTAACCCCCATGGAGGACCTTCTTGCAAAAATTCCC
TGCCAACGTGTTGAGGTTTCCCCACCCAAGGAAACTGGTGATTTACAGAAATCTGCAACT
CCAAGCAGTACTACGTCTGAGATCCCTGATGCCTCGCTCGAGAAAAAACCTGCTGAAACA
AAGTTGAAAGCAGCAGCACCACTCTCTCCATTTACTGCTTATGCAGATCTTAAACCGCCT
ACATCTCCTAGTCCAATTCCTCCCGGTGGTCGTCAAGAAGGTACAATTGGAGCAGAAGAT
AGCAAACCCACAAAAGAAGCCTCTTCTGTTGTTGATTATGCTTTTGACAAAGCAGAATTG
CTGACTACAAGGCCTTCATCTCCATATGCTGCTTATGAAGATTTAAAGCCACCTACATCT
CCTAGTCCAAATCCTCCCGGAGGTCATCAAGAAGGTGCAAGTGGAGCAGAAGATAGCGAA
CCCACTAAGGCAGCCTCTTCTGTTGTTGATTCTACTTTTGACAAAGCAGAATTGCTGACT
ACAAGTTATGAAGATCTAAAACCACCTACATCCCCTAGTACAAATCCTCCCGGAGGTCGT
CAAGAAGGTGCAAGTGGAGCAGAAAATAGCAAACCCACTACGGAAGCCTCTTCTGTTTAT
TTATTTACTTTTGACAAAGCAGAATTGCTGACTACAAGGCCTTTGTCTCCATACACTGCT
TATGAAGATTTAAAGCCACCTACATCTCCAAGTCCAAGACCCAGTGGTTTGAAATCCTCA
GCAACCGTGGAAGTAACATCACCAGTTACTGGAGGCAATGATGTGGCAATCAATAGTGCT
ACCAATTCTGCCAAGGAGGATTCGTCAAAAAATTCAGCTTTCTGTCATTCTCCCTACCCA
GCGTATGAGGACTTCAAGCCTCCAAGTTCTCCAACGCCATCTTTCAATAAAATGTGA