Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021321
CDS Infomation

pacid=37478874 polypeptide=PGSC0003DMP400014504 locus=PGSC0003DMG400008268 ID=PGSC0003DMT400021321.v4.03 annot-version=v4.03
Sequence

ATGATTAAGTGTATTTCAGCCATATATTTTCAGATTGCTGATCCCCCTTTGTTCAGCTAT
GATTACCCATTCTCTCCAATTTCATTATCATCATCATCAGTTCAGCAAGGTCAGAATGAT
ATGGGGATTTTACAATGTGAAGAAAGTTCATCTAATTCAACACTGAGTAACCCTTTTCAC
ATAAAAGAGCCAAGAGAATTTAATGGATCTTTTGTCACAATGACTGAAGTACAAGGGCTC
TGTCGAGATAAACAGAGCTTAGATGGTGTGGATCGCATGTTACAACATTTTAGGTATCTT
GTCTCGAAGTTGAAGGAAGTTGATCCTAGAAAAATGAGGCATGACGAGAAGCTAGCTTTC
TGGATTAATGTCCACAATGCACTAGTGATGCATGCGTTCTTGGTTTATGGGATTCCACGA
AGTACTCTCAAAAGAGTATCTCAACTTCTCAAGGCTGCTTATAACATTGGAGGAAATACA
GTAAGTGTGGAGATGATTCAGAGTTCTATACTAGGATGTCGATTGCCCCGTCCTGGTCAG
TGGATTCAATCATTGTTCTTCCCAAAACAAAAATTTAAGGCTGGAGATGCAAGAAAAGGA
TATGCAATAGAGCATCCAGACCCTCGTCTACGTTTTGCTCTATGCTCAGGAAGCCATTCT
GATGCCCTGCTACGGTTGTACACGCCTAAGAGAGTGTTCCAGGAGCTTGAAGTGGCTAAA
GAAGAGTACCTTCAAACAAACACAAGTGTACACAAGGAACAAAAACTACTTCTCCCCAAG
AATGTGGAATCTTATGTGAAGGAGGTTGATTTGTGCCCTTCTGGCTTGAAGGAAATGATA
CAGCTCGCGTTGCCTGAACATTTTACAAGAAAATATCAGGGGAAGTTATGGAAGAAAATT
GAGTGGATTCCTCACAACTTCACTTTCCGTTACCTAATTTCACATGAATTGCTTGAGTCT
GTCGTATCCTTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400014504
PEP Infomation

pacid=37478874 transcript=PGSC0003DMT400021321 locus=PGSC0003DMG400008268 ID=PGSC0003DMT400021321.v4.03 annot-version=v4.03
Sequence

MIKCISAIYFQIADPPLFSYDYPFSPISLSSSSVQQGQNDMGILQCEESSSNSTLSNPFH
IKEPREFNGSFVTMTEVQGLCRDKQSLDGVDRMLQHFRYLVSKLKEVDPRKMRHDEKLAF
WINVHNALVMHAFLVYGIPRSTLKRVSQLLKAAYNIGGNTVSVEMIQSSILGCRLPRPGQ
WIQSLFFPKQKFKAGDARKGYAIEHPDPRLRFALCSGSHSDALLRLYTPKRVFQELEVAK
EEYLQTNTSVHKEQKLLLPKNVESYVKEVDLCPSGLKEMIQLALPEHFTRKYQGKLWKKI
EWIPHNFTFRYLISHELLESVVSF*

Transcript Sequence

Transcript ID

PGSC0003DMT400021321
Transcript Infomation

pacid=37478874 locus=PGSC0003DMG400008268 ID=PGSC0003DMT400021321.v4.03 annot-version=v4.03
Sequence

ATGATTAAGTGTATTTCAGCCATATATTTTCAGATTGCTGATCCCCCTTTGTTCAGCTAT
GATTACCCATTCTCTCCAATTTCATTATCATCATCATCAGTTCAGCAAGGTCAGAATGAT
ATGGGGATTTTACAATGTGAAGAAAGTTCATCTAATTCAACACTGAGTAACCCTTTTCAC
ATAAAAGAGCCAAGAGAATTTAATGGATCTTTTGTCACAATGACTGAAGTACAAGGGCTC
TGTCGAGATAAACAGAGCTTAGATGGTGTGGATCGCATGTTACAACATTTTAGGTATCTT
GTCTCGAAGTTGAAGGAAGTTGATCCTAGAAAAATGAGGCATGACGAGAAGCTAGCTTTC
TGGATTAATGTCCACAATGCACTAGTGATGCATGCGTTCTTGGTTTATGGGATTCCACGA
AGTACTCTCAAAAGAGTATCTCAACTTCTCAAGGCTGCTTATAACATTGGAGGAAATACA
GTAAGTGTGGAGATGATTCAGAGTTCTATACTAGGATGTCGATTGCCCCGTCCTGGTCAG
TGGATTCAATCATTGTTCTTCCCAAAACAAAAATTTAAGGCTGGAGATGCAAGAAAAGGA
TATGCAATAGAGCATCCAGACCCTCGTCTACGTTTTGCTCTATGCTCAGGAAGCCATTCT
GATGCCCTGCTACGGTTGTACACGCCTAAGAGAGTGTTCCAGGAGCTTGAAGTGGCTAAA
GAAGAGTACCTTCAAACAAACACAAGTGTACACAAGGAACAAAAACTACTTCTCCCCAAG
AATGTGGAATCTTATGTGAAGGAGGTTGATTTGTGCCCTTCTGGCTTGAAGGAAATGATA
CAGCTCGCGTTGCCTGAACATTTTACAAGAAAATATCAGGGGAAGTTATGGAAGAAAATT
GAGTGGATTCCTCACAACTTCACTTTCCGTTACCTAATTTCACATGAATTGCTTGAGTCT
GTCGTATCCTTCTGA