Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021317
CDS Infomation

pacid=37476873 polypeptide=PGSC0003DMP400014500 locus=PGSC0003DMG400008266 ID=PGSC0003DMT400021317.v4.03 annot-version=v4.03
Sequence

ATGGCAATGCTTTCATCTCTTACAAGACGCACTGTTCTCTCAATCCCATTAACAAAACAC
CCATTATCCACATTTTCTGCTTCTACTTCTTCTCCACCACAATCGGAAGATGAAACTTTA
GTCTCAGCTGCCACAACAATCCTCAAACACCATCGCTCAAAATCACGATGGTCCGAGATT
CTTTCTCTAGCTCCTCCAACTTCCGGTTTCACTCCTTCCCAAGTCTCTAAAATCATTCTT
CAACTCCGCAACACACCTCATCTCGCTCTCCGTTTCTTCAATTTCACAGTCCACCGCTCC
ATATGCTGCCACTCTGTTTCTTCCTATGCCACCATCATTCACATCCTCTCCCGTTCTCGC
CTCAAATCCCAAGCCCTAGAGTTAATCAAATGCGCTATTCGTAAATTTCCTGACATCCAT
AAACCTGATTCATCAAACCCACCTCGGATTTTCGAAATCTTGGTTAAAACTTACAGAAGT
TGTGATTCGGCTCCTTTTGTGTTTGATTTGTTGATAAAAGCTTATTTGGATTCTAAGAAA
ATTGATGTTTCTGTTCAACTTGTGAGAACTTTGGCTTCCAAGAATATTTTCCCACATATT
GTTGTATGTAATTCTTTGATTGAGTTGATTGCGAAAAGTCGAGGTCCTTTTGCTGCTTAT
GATATGTATGTGGAAATCTTTAGGTGTGAGAAGGGGGAAGGGAGTGGTAGGGAGGTAAAG
GGTGTGATGGCGAATGCTTATACGTTTAACGTTCTTATGGTTGCTTTTCATAGAGAAGGA
GTAGTGGAGAAGATTGAGGAGGTTTGGAAGGAAATGATGGCAAAGAATTGTACTCCGAAT
GTGTATAGTTATAGCATTTTAATGGCTGCGTATTGTGAAGATGGAAGGGTGGAAAATGCC
ATGAAAGTTTGGAAGGAGATGGGTGACGAGGATGTGAAGCATGATATTGTAGCTTATAAT
ACCATAATTGAGGGGTTTTGCAAAGTCGGAAAGGTTGAGAGAGCTGAGGAGGTTTTCAGG
GAGATGGTCTTCAATGGGGTAGAATGTACTTGTGTTACTCTTGAGCATCTCATAAATGGA
CATTGTATGAGCGGGAATATTGATGCAGCTCTAGTTTTGTATAAGGATATGTGTCGAAAG
GGCTTCAAGCCAGAGAGTTCAACAATAGATGTAGTGGCTAAGGTGCTCTGTGACAAAAGT
GGAGTTTTTGATGCCTTGGAATTCGTGAGAGCTGTAATAAAGAAACACGATATTGTACCA
CGGAAGACAACGTATGAACTTCTTATACAGAGCTTGTGTAAGGAGGGGTGGATGGAAGAA
GCTCTGAAACTTCAGGTAGAGATGGTGGGGAAAGGATATGCACCAAATTTTGAAATATAT
AGTGCTTTCATTGATGGGTACATCAAGCAAGGGGATGAAGAAAAGGCTGAAACTTTGAGG
AATGAAATGCTTAGGAATAAGATACCATGTAAAGACAGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400014500
PEP Infomation

pacid=37476873 transcript=PGSC0003DMT400021317 locus=PGSC0003DMG400008266 ID=PGSC0003DMT400021317.v4.03 annot-version=v4.03
Sequence

MAMLSSLTRRTVLSIPLTKHPLSTFSASTSSPPQSEDETLVSAATTILKHHRSKSRWSEI
LSLAPPTSGFTPSQVSKIILQLRNTPHLALRFFNFTVHRSICCHSVSSYATIIHILSRSR
LKSQALELIKCAIRKFPDIHKPDSSNPPRIFEILVKTYRSCDSAPFVFDLLIKAYLDSKK
IDVSVQLVRTLASKNIFPHIVVCNSLIELIAKSRGPFAAYDMYVEIFRCEKGEGSGREVK
GVMANAYTFNVLMVAFHREGVVEKIEEVWKEMMAKNCTPNVYSYSILMAAYCEDGRVENA
MKVWKEMGDEDVKHDIVAYNTIIEGFCKVGKVERAEEVFREMVFNGVECTCVTLEHLING
HCMSGNIDAALVLYKDMCRKGFKPESSTIDVVAKVLCDKSGVFDALEFVRAVIKKHDIVP
RKTTYELLIQSLCKEGWMEEALKLQVEMVGKGYAPNFEIYSAFIDGYIKQGDEEKAETLR
NEMLRNKIPCKDS*

Transcript Sequence

Transcript ID

PGSC0003DMT400021317
Transcript Infomation

pacid=37476873 locus=PGSC0003DMG400008266 ID=PGSC0003DMT400021317.v4.03 annot-version=v4.03
Sequence

ATGGCAATGCTTTCATCTCTTACAAGACGCACTGTTCTCTCAATCCCATTAACAAAACAC
CCATTATCCACATTTTCTGCTTCTACTTCTTCTCCACCACAATCGGAAGATGAAACTTTA
GTCTCAGCTGCCACAACAATCCTCAAACACCATCGCTCAAAATCACGATGGTCCGAGATT
CTTTCTCTAGCTCCTCCAACTTCCGGTTTCACTCCTTCCCAAGTCTCTAAAATCATTCTT
CAACTCCGCAACACACCTCATCTCGCTCTCCGTTTCTTCAATTTCACAGTCCACCGCTCC
ATATGCTGCCACTCTGTTTCTTCCTATGCCACCATCATTCACATCCTCTCCCGTTCTCGC
CTCAAATCCCAAGCCCTAGAGTTAATCAAATGCGCTATTCGTAAATTTCCTGACATCCAT
AAACCTGATTCATCAAACCCACCTCGGATTTTCGAAATCTTGGTTAAAACTTACAGAAGT
TGTGATTCGGCTCCTTTTGTGTTTGATTTGTTGATAAAAGCTTATTTGGATTCTAAGAAA
ATTGATGTTTCTGTTCAACTTGTGAGAACTTTGGCTTCCAAGAATATTTTCCCACATATT
GTTGTATGTAATTCTTTGATTGAGTTGATTGCGAAAAGTCGAGGTCCTTTTGCTGCTTAT
GATATGTATGTGGAAATCTTTAGGTGTGAGAAGGGGGAAGGGAGTGGTAGGGAGGTAAAG
GGTGTGATGGCGAATGCTTATACGTTTAACGTTCTTATGGTTGCTTTTCATAGAGAAGGA
GTAGTGGAGAAGATTGAGGAGGTTTGGAAGGAAATGATGGCAAAGAATTGTACTCCGAAT
GTGTATAGTTATAGCATTTTAATGGCTGCGTATTGTGAAGATGGAAGGGTGGAAAATGCC
ATGAAAGTTTGGAAGGAGATGGGTGACGAGGATGTGAAGCATGATATTGTAGCTTATAAT
ACCATAATTGAGGGGTTTTGCAAAGTCGGAAAGGTTGAGAGAGCTGAGGAGGTTTTCAGG
GAGATGGTCTTCAATGGGGTAGAATGTACTTGTGTTACTCTTGAGCATCTCATAAATGGA
CATTGTATGAGCGGGAATATTGATGCAGCTCTAGTTTTGTATAAGGATATGTGTCGAAAG
GGCTTCAAGCCAGAGAGTTCAACAATAGATGTAGTGGCTAAGGTGCTCTGTGACAAAAGT
GGAGTTTTTGATGCCTTGGAATTCGTGAGAGCTGTAATAAAGAAACACGATATTGTACCA
CGGAAGACAACGTATGAACTTCTTATACAGAGCTTGTGTAAGGAGGGGTGGATGGAAGAA
GCTCTGAAACTTCAGGTAGAGATGGTGGGGAAAGGATATGCACCAAATTTTGAAATATAT
AGTGCTTTCATTGATGGGTACATCAAGCAAGGGGATGAAGAAAAGGCTGAAACTTTGAGG
AATGAAATGCTTAGGAATAAGATACCATGTAAAGACAGCTAG