Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021309
CDS Infomation

pacid=37478096 polypeptide=PGSC0003DMP400014493 locus=PGSC0003DMG400008261 ID=PGSC0003DMT400021309.v4.03 annot-version=v4.03
Sequence

ATGGCTGACGATTTTTGTTTTTTCAGCAAGGACTCCATCATAAAGCCACCAAAGGCTTCT
CCGATGATGCTGAGGATGGTTGTGTTAATCTTTGCAATGGTATGTGGAGTTTATATATGT
TCTATTGGCTTGAAACAAATTGGTGTGCATTCCAGTGGACGGATCGTAAGTGTTCATGTG
GTTGAAAAGCCGTGTGAGGCAACTGATATTGAACCTTCAGAAAAACCTTATGTGCACTTC
CCCAAGCCAAAGACTTTTAGCCGGGCGGAATGTGCTTGCAATCCTGTAAGGAATTTTGCA
ATATTGTCCACGCAGAGATCTGGTAGTGGATGGTTTGAGACATTGCTAAACAGTCATATG
AATATAAGCTCTAATGGGGAGATTTTTTCTGTTAAAGTCCGGAAAAGTAACGTGTCAACA
ATTTTGGACACTCTGGACAAACTTTATAACCTAGACTTTTTTACGAGTGCTTCCAAGAAT
GAATGTACTGCTGCAGTTGGACTCAAGTGGATGCTTAATCAGGGTCTGATGCAGAATCAT
GAGCAAATTGTTGAATATTTCAAAACCAGAGGAGTTTCTGCTATTTTTCTCTTCAGAAGA
AATCTGTTGCGCAGAATGATTTCAATGCTAGCAAATTCCTATGATCAGAGTGCTAAGCTG
GTAAATGGAACCCACAAGTCTCATGTGCATTCTCCCAAGGAGGCTGAGATGCTTGCAAGT
TACAAACCCACGATAAACACAACTTTGCTGATCCCCAACCTGAAGCAAGTAGACAACATG
GCTATAAAAGCTGTGCAATACTTCAATAGCACTCGACATATTATATTGTTCTACGAGGAC
ATAATAAAAAATCAAACAATACTGAACGATGTTCAAGATTTCCTGAAAGTTCCTAGAAGG
GACCTTCACAGCCGTCAGGTGAAGATACACAAAGGGACATTGTCTTCACAAGTTGAAAAT
TGGGTTGATGTTGAAAAGACACTCAAGGGAACGCCATATGAAAGCTTCCTACATTCAGAT
TACAAAATATAG

Peptide Sequence

PEP ID

PGSC0003DMP400014493
PEP Infomation

pacid=37478096 transcript=PGSC0003DMT400021309 locus=PGSC0003DMG400008261 ID=PGSC0003DMT400021309.v4.03 annot-version=v4.03
Sequence

MADDFCFFSKDSIIKPPKASPMMLRMVVLIFAMVCGVYICSIGLKQIGVHSSGRIVSVHV
VEKPCEATDIEPSEKPYVHFPKPKTFSRAECACNPVRNFAILSTQRSGSGWFETLLNSHM
NISSNGEIFSVKVRKSNVSTILDTLDKLYNLDFFTSASKNECTAAVGLKWMLNQGLMQNH
EQIVEYFKTRGVSAIFLFRRNLLRRMISMLANSYDQSAKLVNGTHKSHVHSPKEAEMLAS
YKPTINTTLLIPNLKQVDNMAIKAVQYFNSTRHIILFYEDIIKNQTILNDVQDFLKVPRR
DLHSRQVKIHKGTLSSQVENWVDVEKTLKGTPYESFLHSDYKI*

Transcript Sequence

Transcript ID

PGSC0003DMT400021309
Transcript Infomation

pacid=37478096 locus=PGSC0003DMG400008261 ID=PGSC0003DMT400021309.v4.03 annot-version=v4.03
Sequence

ATGGCTGACGATTTTTGTTTTTTCAGCAAGGACTCCATCATAAAGCCACCAAAGGCTTCT
CCGATGATGCTGAGGATGGTTGTGTTAATCTTTGCAATGGTATGTGGAGTTTATATATGT
TCTATTGGCTTGAAACAAATTGGTGTGCATTCCAGTGGACGGATCGTAAGTGTTCATGTG
GTTGAAAAGCCGTGTGAGGCAACTGATATTGAACCTTCAGAAAAACCTTATGTGCACTTC
CCCAAGCCAAAGACTTTTAGCCGGGCGGAATGTGCTTGCAATCCTGTAAGGAATTTTGCA
ATATTGTCCACGCAGAGATCTGGTAGTGGATGGTTTGAGACATTGCTAAACAGTCATATG
AATATAAGCTCTAATGGGGAGATTTTTTCTGTTAAAGTCCGGAAAAGTAACGTGTCAACA
ATTTTGGACACTCTGGACAAACTTTATAACCTAGACTTTTTTACGAGTGCTTCCAAGAAT
GAATGTACTGCTGCAGTTGGACTCAAGTGGATGCTTAATCAGGGTCTGATGCAGAATCAT
GAGCAAATTGTTGAATATTTCAAAACCAGAGGAGTTTCTGCTATTTTTCTCTTCAGAAGA
AATCTGTTGCGCAGAATGATTTCAATGCTAGCAAATTCCTATGATCAGAGTGCTAAGCTG
GTAAATGGAACCCACAAGTCTCATGTGCATTCTCCCAAGGAGGCTGAGATGCTTGCAAGT
TACAAACCCACGATAAACACAACTTTGCTGATCCCCAACCTGAAGCAAGTAGACAACATG
GCTATAAAAGCTGTGCAATACTTCAATAGCACTCGACATATTATATTGTTCTACGAGGAC
ATAATAAAAAATCAAACAATACTGAACGATGTTCAAGATTTCCTGAAAGTTCCTAGAAGG
GACCTTCACAGCCGTCAGGTGAAGATACACAAAGGGACATTGTCTTCACAAGTTGAAAAT
TGGGTTGATGTTGAAAAGACACTCAAGGGAACGCCATATGAAAGCTTCCTACATTCAGAT
TACAAAATATAG