Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021235
CDS Infomation

pacid=37468340 polypeptide=PGSC0003DMP400014460 locus=PGSC0003DMG400008223 ID=PGSC0003DMT400021235.v4.03 annot-version=v4.03
Sequence

ATGGAGGAAGTAGTGAAAGTGAAGGTCGAAGAAGATGGCATTCCGACGGCCGTGCTGCCT
ATGGAAGGGTTGCACGACGTTGGTCCGCCACCATTTCTGAGCAAAACTTATGAAATGGTG
GAAGATTCTTCAACTGATGAAGTCATATCGTGGAGCACAACAAGGAATAGCTTTATTGTT
TGGGATTCTCACAAGTTTTCCACCACATTGTTGCCTAGATTTTTCAAGCACAGCAATTTT
TCCAGTTTCATTCGGCAGCTTAACACATATGGATTTAGAAAGGTGGATCCTGACAGATGG
GAATTTGCGAATGAAGGTTTCCTGGGAGGGCAGAAGCATCTTTTGAAGACTATAAAGAGG
AGGAGGAATGTTGGTCAAAGTATGAATCAACAAGGATCCGGCGCTTGCATTGAAATTGGT
TATTATGGGATGGAGGAGGAGTTAGAAAGATTAAAGCGGGATAAAAACGTGTTGATGACT
GAAATAGTTAAACTTAGGCAGCAACAGCAGAGTACGAGGAATCAGATCATTGCCATGGGA
GAAAAAATCGAAAGGCAGGAGAGGAAACAAGAGCAGATGATGAGTTTCTTAGCAAAGATC
TTCAGCAATCCAACTTTTCTCCAGCAGTACTTGGACAAACATGTGCAGAGAAAAGATAAA
CAACGTATCGAAGTTGGACAAAAGAGGAGACTAACGATGACCCCCAGTGCTGAGAACCTT
CAAGATGTAGCCACACGAAGTGATCATCAGCCTATGAATTACTCCTCACACCAAGAGCGT
GAAGCTGAGCTTGCAAGTATTGAAATGTTATTCTCTGCTGCAATGGACAATGAATCAAGC
AGCAATGTCAGGTCGGCTTCTGTTGTGACAGCAAATGGCACAGGGCCTGAAGATATTTGG
GAAGAGTTGTTCAGTGAAGATCTTATATCCGGGGATCGAGCAGAGGAAGTACTGGTTGTT
GAACAACCTGAATTCGACGTGGAAGTTGAAGATCTTGTTGCAAAAACACCTGAATGGGGT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400014460
PEP Infomation

pacid=37468340 transcript=PGSC0003DMT400021235 locus=PGSC0003DMG400008223 ID=PGSC0003DMT400021235.v4.03 annot-version=v4.03
Sequence

MEEVVKVKVEEDGIPTAVLPMEGLHDVGPPPFLSKTYEMVEDSSTDEVISWSTTRNSFIV
WDSHKFSTTLLPRFFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKR
RRNVGQSMNQQGSGACIEIGYYGMEEELERLKRDKNVLMTEIVKLRQQQQSTRNQIIAMG
EKIERQERKQEQMMSFLAKIFSNPTFLQQYLDKHVQRKDKQRIEVGQKRRLTMTPSAENL
QDVATRSDHQPMNYSSHQEREAELASIEMLFSAAMDNESSSNVRSASVVTANGTGPEDIW
EELFSEDLISGDRAEEVLVVEQPEFDVEVEDLVAKTPEWG*

Transcript Sequence

Transcript ID

PGSC0003DMT400021235
Transcript Infomation

pacid=37468340 locus=PGSC0003DMG400008223 ID=PGSC0003DMT400021235.v4.03 annot-version=v4.03
Sequence

ATGGAGGAAGTAGTGAAAGTGAAGGTCGAAGAAGATGGCATTCCGACGGCCGTGCTGCCT
ATGGAAGGGTTGCACGACGTTGGTCCGCCACCATTTCTGAGCAAAACTTATGAAATGGTG
GAAGATTCTTCAACTGATGAAGTCATATCGTGGAGCACAACAAGGAATAGCTTTATTGTT
TGGGATTCTCACAAGTTTTCCACCACATTGTTGCCTAGATTTTTCAAGCACAGCAATTTT
TCCAGTTTCATTCGGCAGCTTAACACATATGGATTTAGAAAGGTGGATCCTGACAGATGG
GAATTTGCGAATGAAGGTTTCCTGGGAGGGCAGAAGCATCTTTTGAAGACTATAAAGAGG
AGGAGGAATGTTGGTCAAAGTATGAATCAACAAGGATCCGGCGCTTGCATTGAAATTGGT
TATTATGGGATGGAGGAGGAGTTAGAAAGATTAAAGCGGGATAAAAACGTGTTGATGACT
GAAATAGTTAAACTTAGGCAGCAACAGCAGAGTACGAGGAATCAGATCATTGCCATGGGA
GAAAAAATCGAAAGGCAGGAGAGGAAACAAGAGCAGATGATGAGTTTCTTAGCAAAGATC
TTCAGCAATCCAACTTTTCTCCAGCAGTACTTGGACAAACATGTGCAGAGAAAAGATAAA
CAACGTATCGAAGTTGGACAAAAGAGGAGACTAACGATGACCCCCAGTGCTGAGAACCTT
CAAGATGTAGCCACACGAAGTGATCATCAGCCTATGAATTACTCCTCACACCAAGAGCGT
GAAGCTGAGCTTGCAAGTATTGAAATGTTATTCTCTGCTGCAATGGACAATGAATCAAGC
AGCAATGTCAGGTCGGCTTCTGTTGTGACAGCAAATGGCACAGGGCCTGAAGATATTTGG
GAAGAGTTGTTCAGTGAAGATCTTATATCCGGGGATCGAGCAGAGGAAGTACTGGTTGTT
GAACAACCTGAATTCGACGTGGAAGTTGAAGATCTTGTTGCAAAAACACCTGAATGGGGT
TAA