Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021201
CDS Infomation

pacid=37467705 polypeptide=PGSC0003DMP400014438 locus=PGSC0003DMG400008209 ID=PGSC0003DMT400021201.v4.03 annot-version=v4.03
Sequence

ATGTCTTGGAAAAGCAATAGTGGGGATCTGAATGGTGGGCGATTGTTGCGTGACATTGAA
GAAATTAGTAAAGCTCTTTATGTACATAAAACCCCTCAGAAGGCTTTAACTTTTCAAGCA
GATAATGGGCATGATTCCGTTGGTGATACCCATGTCTCCAAATCCAGTTCCAATATTGCT
GATGACATGCTGCATAATAAGAAGAAATCATCAATATGGAGTTGGAAGCCATTAAAGGTT
CTAACTCATATCCTCCATCGACGGTTCAGTTGTTGTTTCTTTCTTCATGTTCATTCCATA
AAAGGATTGCCCGTCAATTTCAAGGACCTTTCTTTGTGTGTAAATTGGAAACGTAAGGGT
GAAGTGATGAGTACTCGCCCTGCTCAGATTTGTCAGGGAACAGCTGAGTTTGAAGAGACT
TTGATGCATTCCAGTTCTGTATATGGAAGTAGGACCGGACACCAGCATTCAGCAAAGTAT
GAGCCCAAATATTTCCTGCTTTATGTTTCTGTGATTGGGGCTCCAGCCCTTGATATTGGC
AAACATTGTGTTGATCTTACGAGGTTGCTTCCAATTACCATGGAGGAGTTAGAGGAGGGA
AGAAGGAATTCAGGGAAATGGACCACGAGCTTCAAGCTTTCAGGAAAGGCTAAAGGTGCA
ATTTTGAATGTTAGTTTCGGGTTCACTGTATCAGGGAGTAACTCGATTGAACCTAGCCCA
TTCGTGCGAGGCATCAAACCTGCTGCAATAGATCATTTGTCAGAACGTGATGGGGCTAGT
GCTAATAGAAGTCTTCGGCGGGTTGGAAGCGTCCCCCGTGAGCCTGCTGGTATGGCTCAT
TCTTCATCTAGGTCCCAAGATGCAAGAAGTTTTGATGAAGTTTTATCAGACCAAAAATCA
GAACTTTCTCGCTCTATTAGCTTTCTGTATAAAAAACTTGAGGACGGAAAATTGGGTAAA
TTGGATGATATGGATTTCTTTTTTGAATACTTGGCGCCCTTAAAACCTAACTCTGGCGCT
TTGTCACAGTTTTCTGCTGAAAATACCATAGATGATCAACATATTGAGTTTTCTGTCAGT
GAGCTGGGCATAGAATCCTCTACGAAAGAGCAGGTGAGACCAGAAGTATGTTCTTATGAA
AATTGTGATGATACTCAAATAGAAACTGCTGATGTTGCATACATTTTGGAGGAAAGAAGT
AATGAGAAAAGTGAATACAAGCAAAAGTGTGAAAGCAATGATGTCTACGAAGGAGAATAT
ACAATGAAAAGCAGCAATTATGAGGAGAGTGATGTATGCAAGGATGAAATGTTTGAAGAG
CTCGAGTCGGTTTTCCTTGACCTGTTGACTGCTGAGTCCACAGAGTTGGATTCACCAGTA
GAAATGTATGATTCCATTGACCAAGAAAACTACATGAATCTGAAGTCCAGCTATAAATCC
AGTAGGCGGGTGAAATCACTTAGCCTAGATGATGTGACAGAGTCTGTGGCAAATGATTTT
CTGGAAATGTTGAACATTGAGCAGACCTCAGTTGACTTGAGTTCGGATAGCTGTCTGGTT
TCGCCAAGAGAATGCCTTGTGAGACAGTTTGAGAAGGAAACCCTTTCTTCTGGAAACTCA
AGTTTTGATTTTGATGCTACAGACAATCAAGTGGAATTCAGTGGCATTGCTTCAAGTGTT
CATGGAAAAGTTGCATGTTCTGATGACTTTGATCTGTCATCAGTTATTAAGGATTTTGAG
AAGGAGCATAAGAGAGGTACCCAGTCATTGAGGAGTAAAAGGAATGCAAAAATGATAGAG
AACTTGGAAACTGAGACCTTAATGCAAGATTGGGGTTTGAATGAGAAAGCATTCCAGAAT
TCACCACGCATCAGCTTTGGTGGGTTTGGAAGTCCAATCTATCTTTCCCCTGAAAGACCA
TTAAAATTTCCTCCTATTGGAGAGGGCCTAGGTTCTAAAATGTGCACGCGTAATGGGGGC
TTCTTATGTTCAATGAGTCCTCAACTTTTTCGGAATGCAAGGAATGGTGCAAGATTGATC
ATGCAATTTGCTAGTCCAGTGGTGCTCCCTGCTACTATGGGTACTTGTAGCGTTATGGAA
ATACTCAGCGGCTGGGCATCTGGTGGAATTTCCAAAATGTCTGCTCAGGCAGATAAGCTG
ATGCCTTTAGAAGATATCACTGGGAGGAATATACAAGAAATAGCCTGGGAAGCCGGATCC
AGACTTGAACGAGATGAGAGGTTCACTTTTTGGCATGGGTTGTTAGGTATGAAGAAGGGC
AGTGAAGATCTGCTGTTTCATCAGAGTTCTGGTCATCTCAATTCAACCTCAATAATTGAT
GGTGTAGATTTAGGTTTTGTGTTTATGGAGGATCTAGTTCCTTTGGCAATGGATAAGATA
GAATCTCTTACAATAGAGGGGTTGAGAATCCAGTCAAACTTGTCAGATAATGAAGCACCT
TCAAGCATTAGGCCTCAATTTAGTGAAGTTCTTAGTTCTTATACAGCTGGTGCATCAAAA
CATTGGTGTGGTAAAGAAAGTGATGATGATGAGGGTGCTTTAGTGGAGCTGTCTGTTTCA
CTAGATGAATGGTTGAGGCTGGATGCTGGAGATTTCAGTAATAATCCTGATGAGACCAAG
GAAAGAATTACCAAAATCTTAGCAGCCCATTGTGCTAAGTCTGTTGATTTAGATAGCTCA
GGATTGGAAACAGGTGTAGAAAGGCCAGAACTGTGTAACAACTTGACGTTAGCTCTGAGG
GTTCAACTCAGAGATCCTCTGCGTGACTATGAGATGGTTGGCATCTCCATGCTCATTCTG
ATTCAATTAGATAGGTCCTATGCTCCTGTTGAACAAAATACATGTGGCAGAGCATCAGAA
AGAAATTCAAGCAGTGAAAATGATCCGAAGGAGCAATCCATTCAAGAAGAAATTATTGCT
GGAGAAAGTGAGGGTGGAATCCATAGGCAGGCTGTTTCTCAGTTTAAGATCACTGAAATT
CATGTTGCAGGTTTTAATAATGGGCTTAATGATGACCAAATTTGGGGCACAAAAAGTCAG
CAACAAGCTGGGTCGCGGTGGTTGCTATCAAGTGGCACGGGGAGGACAAGCAAACGTCCA
TTCTCCAAGTCAAACGCCATCATAAGATCATCCTCGCAGTTGAGGAGAAATATGCTGCCT
AGAGATGTTTTGTGGAGCATTTCATCGGATTTTCATACCAGAGATTCCAAGTTGGCTGCA
TCAAATGCTCATACACGAAATGCTGATATTATTTTTCCAACTGAAGGCTGTCCAAATCTC
AGTCAGTTGGAAATCAAGTTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400014438
PEP Infomation

pacid=37467705 transcript=PGSC0003DMT400021201 locus=PGSC0003DMG400008209 ID=PGSC0003DMT400021201.v4.03 annot-version=v4.03
Sequence

MSWKSNSGDLNGGRLLRDIEEISKALYVHKTPQKALTFQADNGHDSVGDTHVSKSSSNIA
DDMLHNKKKSSIWSWKPLKVLTHILHRRFSCCFFLHVHSIKGLPVNFKDLSLCVNWKRKG
EVMSTRPAQICQGTAEFEETLMHSSSVYGSRTGHQHSAKYEPKYFLLYVSVIGAPALDIG
KHCVDLTRLLPITMEELEEGRRNSGKWTTSFKLSGKAKGAILNVSFGFTVSGSNSIEPSP
FVRGIKPAAIDHLSERDGASANRSLRRVGSVPREPAGMAHSSSRSQDARSFDEVLSDQKS
ELSRSISFLYKKLEDGKLGKLDDMDFFFEYLAPLKPNSGALSQFSAENTIDDQHIEFSVS
ELGIESSTKEQVRPEVCSYENCDDTQIETADVAYILEERSNEKSEYKQKCESNDVYEGEY
TMKSSNYEESDVCKDEMFEELESVFLDLLTAESTELDSPVEMYDSIDQENYMNLKSSYKS
SRRVKSLSLDDVTESVANDFLEMLNIEQTSVDLSSDSCLVSPRECLVRQFEKETLSSGNS
SFDFDATDNQVEFSGIASSVHGKVACSDDFDLSSVIKDFEKEHKRGTQSLRSKRNAKMIE
NLETETLMQDWGLNEKAFQNSPRISFGGFGSPIYLSPERPLKFPPIGEGLGSKMCTRNGG
FLCSMSPQLFRNARNGARLIMQFASPVVLPATMGTCSVMEILSGWASGGISKMSAQADKL
MPLEDITGRNIQEIAWEAGSRLERDERFTFWHGLLGMKKGSEDLLFHQSSGHLNSTSIID
GVDLGFVFMEDLVPLAMDKIESLTIEGLRIQSNLSDNEAPSSIRPQFSEVLSSYTAGASK
HWCGKESDDDEGALVELSVSLDEWLRLDAGDFSNNPDETKERITKILAAHCAKSVDLDSS
GLETGVERPELCNNLTLALRVQLRDPLRDYEMVGISMLILIQLDRSYAPVEQNTCGRASE
RNSSSENDPKEQSIQEEIIAGESEGGIHRQAVSQFKITEIHVAGFNNGLNDDQIWGTKSQ
QQAGSRWLLSSGTGRTSKRPFSKSNAIIRSSSQLRRNMLPRDVLWSISSDFHTRDSKLAA
SNAHTRNADIIFPTEGCPNLSQLEIKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400021201
Transcript Infomation

pacid=37467705 locus=PGSC0003DMG400008209 ID=PGSC0003DMT400021201.v4.03 annot-version=v4.03
Sequence

ATGTCTTGGAAAAGCAATAGTGGGGATCTGAATGGTGGGCGATTGTTGCGTGACATTGAA
GAAATTAGTAAAGCTCTTTATGTACATAAAACCCCTCAGAAGGCTTTAACTTTTCAAGCA
GATAATGGGCATGATTCCGTTGGTGATACCCATGTCTCCAAATCCAGTTCCAATATTGCT
GATGACATGCTGCATAATAAGAAGAAATCATCAATATGGAGTTGGAAGCCATTAAAGGTT
CTAACTCATATCCTCCATCGACGGTTCAGTTGTTGTTTCTTTCTTCATGTTCATTCCATA
AAAGGATTGCCCGTCAATTTCAAGGACCTTTCTTTGTGTGTAAATTGGAAACGTAAGGGT
GAAGTGATGAGTACTCGCCCTGCTCAGATTTGTCAGGGAACAGCTGAGTTTGAAGAGACT
TTGATGCATTCCAGTTCTGTATATGGAAGTAGGACCGGACACCAGCATTCAGCAAAGTAT
GAGCCCAAATATTTCCTGCTTTATGTTTCTGTGATTGGGGCTCCAGCCCTTGATATTGGC
AAACATTGTGTTGATCTTACGAGGTTGCTTCCAATTACCATGGAGGAGTTAGAGGAGGGA
AGAAGGAATTCAGGGAAATGGACCACGAGCTTCAAGCTTTCAGGAAAGGCTAAAGGTGCA
ATTTTGAATGTTAGTTTCGGGTTCACTGTATCAGGGAGTAACTCGATTGAACCTAGCCCA
TTCGTGCGAGGCATCAAACCTGCTGCAATAGATCATTTGTCAGAACGTGATGGGGCTAGT
GCTAATAGAAGTCTTCGGCGGGTTGGAAGCGTCCCCCGTGAGCCTGCTGGTATGGCTCAT
TCTTCATCTAGGTCCCAAGATGCAAGAAGTTTTGATGAAGTTTTATCAGACCAAAAATCA
GAACTTTCTCGCTCTATTAGCTTTCTGTATAAAAAACTTGAGGACGGAAAATTGGGTAAA
TTGGATGATATGGATTTCTTTTTTGAATACTTGGCGCCCTTAAAACCTAACTCTGGCGCT
TTGTCACAGTTTTCTGCTGAAAATACCATAGATGATCAACATATTGAGTTTTCTGTCAGT
GAGCTGGGCATAGAATCCTCTACGAAAGAGCAGGTGAGACCAGAAGTATGTTCTTATGAA
AATTGTGATGATACTCAAATAGAAACTGCTGATGTTGCATACATTTTGGAGGAAAGAAGT
AATGAGAAAAGTGAATACAAGCAAAAGTGTGAAAGCAATGATGTCTACGAAGGAGAATAT
ACAATGAAAAGCAGCAATTATGAGGAGAGTGATGTATGCAAGGATGAAATGTTTGAAGAG
CTCGAGTCGGTTTTCCTTGACCTGTTGACTGCTGAGTCCACAGAGTTGGATTCACCAGTA
GAAATGTATGATTCCATTGACCAAGAAAACTACATGAATCTGAAGTCCAGCTATAAATCC
AGTAGGCGGGTGAAATCACTTAGCCTAGATGATGTGACAGAGTCTGTGGCAAATGATTTT
CTGGAAATGTTGAACATTGAGCAGACCTCAGTTGACTTGAGTTCGGATAGCTGTCTGGTT
TCGCCAAGAGAATGCCTTGTGAGACAGTTTGAGAAGGAAACCCTTTCTTCTGGAAACTCA
AGTTTTGATTTTGATGCTACAGACAATCAAGTGGAATTCAGTGGCATTGCTTCAAGTGTT
CATGGAAAAGTTGCATGTTCTGATGACTTTGATCTGTCATCAGTTATTAAGGATTTTGAG
AAGGAGCATAAGAGAGGTACCCAGTCATTGAGGAGTAAAAGGAATGCAAAAATGATAGAG
AACTTGGAAACTGAGACCTTAATGCAAGATTGGGGTTTGAATGAGAAAGCATTCCAGAAT
TCACCACGCATCAGCTTTGGTGGGTTTGGAAGTCCAATCTATCTTTCCCCTGAAAGACCA
TTAAAATTTCCTCCTATTGGAGAGGGCCTAGGTTCTAAAATGTGCACGCGTAATGGGGGC
TTCTTATGTTCAATGAGTCCTCAACTTTTTCGGAATGCAAGGAATGGTGCAAGATTGATC
ATGCAATTTGCTAGTCCAGTGGTGCTCCCTGCTACTATGGGTACTTGTAGCGTTATGGAA
ATACTCAGCGGCTGGGCATCTGGTGGAATTTCCAAAATGTCTGCTCAGGCAGATAAGCTG
ATGCCTTTAGAAGATATCACTGGGAGGAATATACAAGAAATAGCCTGGGAAGCCGGATCC
AGACTTGAACGAGATGAGAGGTTCACTTTTTGGCATGGGTTGTTAGGTATGAAGAAGGGC
AGTGAAGATCTGCTGTTTCATCAGAGTTCTGGTCATCTCAATTCAACCTCAATAATTGAT
GGTGTAGATTTAGGTTTTGTGTTTATGGAGGATCTAGTTCCTTTGGCAATGGATAAGATA
GAATCTCTTACAATAGAGGGGTTGAGAATCCAGTCAAACTTGTCAGATAATGAAGCACCT
TCAAGCATTAGGCCTCAATTTAGTGAAGTTCTTAGTTCTTATACAGCTGGTGCATCAAAA
CATTGGTGTGGTAAAGAAAGTGATGATGATGAGGGTGCTTTAGTGGAGCTGTCTGTTTCA
CTAGATGAATGGTTGAGGCTGGATGCTGGAGATTTCAGTAATAATCCTGATGAGACCAAG
GAAAGAATTACCAAAATCTTAGCAGCCCATTGTGCTAAGTCTGTTGATTTAGATAGCTCA
GGATTGGAAACAGGTGTAGAAAGGCCAGAACTGTGTAACAACTTGACGTTAGCTCTGAGG
GTTCAACTCAGAGATCCTCTGCGTGACTATGAGATGGTTGGCATCTCCATGCTCATTCTG
ATTCAATTAGATAGGTCCTATGCTCCTGTTGAACAAAATACATGTGGCAGAGCATCAGAA
AGAAATTCAAGCAGTGAAAATGATCCGAAGGAGCAATCCATTCAAGAAGAAATTATTGCT
GGAGAAAGTGAGGGTGGAATCCATAGGCAGGCTGTTTCTCAGTTTAAGATCACTGAAATT
CATGTTGCAGGTTTTAATAATGGGCTTAATGATGACCAAATTTGGGGCACAAAAAGTCAG
CAACAAGCTGGGTCGCGGTGGTTGCTATCAAGTGGCACGGGGAGGACAAGCAAACGTCCA
TTCTCCAAGTCAAACGCCATCATAAGATCATCCTCGCAGTTGAGGAGAAATATGCTGCCT
AGAGATGTTTTGTGGAGCATTTCATCGGATTTTCATACCAGAGATTCCAAGTTGGCTGCA
TCAAATGCTCATACACGAAATGCTGATATTATTTTTCCAACTGAAGGCTGTCCAAATCTC
AGTCAGTTGGAAATCAAGTTATAA