Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021076
CDS Infomation

pacid=37478438 polypeptide=PGSC0003DMP400014353 locus=PGSC0003DMG400008160 ID=PGSC0003DMT400021076.v4.03 annot-version=v4.03
Sequence

ATGACTCCTGAAGATTCCTTAAGAACTCTCTCTTTAGATTATCTAAATCTCCTCATCAAT
GGTCAAGCTTTTAGTGATGTTACTTTTAGTGTTGAAGGTCGTTTAGTACATGCTCATAGA
TGTATCTTAGCTGCTAGAAGTCTCTTCTTTCGCAAATTCTTCTGCGGGCCGGAGTCATCT
TCTGTCTCCGGCCCGCGGTTGGGCCCGTTCGGCGCTGGCGCTGGACTAGCGTCGTCGCCG
AGGGGCACAACAAGTTGTTCACAGGTAATACCTGTGAACACTGTAGGGTATGAAGTGTTT
TTGTTGATGTTACAATTTTTGTATAGTGGACAAGTTTCAATTGTGCCACAAAAACATGAA
CCAAGGCCTAATTGTGGTGAAAGAAGCTGTTGGCATACACATTGCACTGCAGCCGTTGAT
CTTGCACTTGATACACTTACAGCCGCTAGATCTTTTGGAGTTGAACAACTTGCTTTGCTT
ACTCAGAAGCATTTGATAAGCATGGTGGAGAAAGCTTCAATTGAGGATGTGATGAAAGTT
TTAATAGCTTCAAGAAAACAAGACATGCATCAACTTTGGACTACTTGTTCTCATTTGATT
GCAAAATCAGGCCTCCCACCTGAAATCCTAACCAAACACCTCCCTATTGATGTTGTTGCT
AAAATCGAAGATCTCCGTCTCAAATCCTCTATATCGCGAAGATCTTTAATCCCTCATCAT
CATCACCATCATCACCAAATGTCCTCGAACATTGAGCTCGAGGACCAGAAGATCCGACGA
ATGAGACGAGCGCTCGATTCGTCGGACGTTGAACTAGTCAAACTTATGGTAATGGGAGAA
GGGTTAAATCTTGACGAGTCACTCGCCTTACATTACGCGGTTGAAAATTGTAGCCGCGAA
GTTGTAAAGGCTTTACTAGAGCTCGGCGCGGCCGAGGTTAATTATCAGGCCGGGCCGAGC
TGTAAAAGCCCGTTACACTTAGCGGCCGAAATGGTGTCACCAGATATGGTTGCGGTTCTT
CTAGATCATCATGCTGACCCGAATATCCAAACGGTGGATGGGATCACTCCACTCGATATT
CTACGAACCCTAACGTCCGATTTTTTATTCAAAGGTGCGATCCCGGGTCTAACTCATATC
GAACCAAATAAACTACGTCTATGTCTTGAGTTAGTTCAATCCGCGGCTATGGTAATTTCG
CGAGAGGAGGGTGAAGCGAATAATAATCAATCTTCGGAGAACATGTATACACATGTTCGC
GAAGATCATAGTTCGAGTACGAGCAGTGGAAACAACAACTTGAATTTGGATTCAAGAATG
GTGTATTTGAATCTTGGTGCAAATGTAGCAACGACTCATCATCAAATGGCATGCAAAATG
AATAATAATGAAGGTGATCATGATTGCAGCAGAAGCCACAATAATCAGAATCCATCAACA
ATGTACCATCATCATCATTCTCATGAGTATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400014353
PEP Infomation

pacid=37478438 transcript=PGSC0003DMT400021076 locus=PGSC0003DMG400008160 ID=PGSC0003DMT400021076.v4.03 annot-version=v4.03
Sequence

MTPEDSLRTLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPESS
SVSGPRLGPFGAGAGLASSPRGTTSCSQVIPVNTVGYEVFLLMLQFLYSGQVSIVPQKHE
PRPNCGERSCWHTHCTAAVDLALDTLTAARSFGVEQLALLTQKHLISMVEKASIEDVMKV
LIASRKQDMHQLWTTCSHLIAKSGLPPEILTKHLPIDVVAKIEDLRLKSSISRRSLIPHH
HHHHHQMSSNIELEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDESLALHYAVENCSRE
VVKALLELGAAEVNYQAGPSCKSPLHLAAEMVSPDMVAVLLDHHADPNIQTVDGITPLDI
LRTLTSDFLFKGAIPGLTHIEPNKLRLCLELVQSAAMVISREEGEANNNQSSENMYTHVR
EDHSSSTSSGNNNLNLDSRMVYLNLGANVATTHHQMACKMNNNEGDHDCSRSHNNQNPST
MYHHHHSHEY*

Transcript Sequence

Transcript ID

PGSC0003DMT400021076
Transcript Infomation

pacid=37478438 locus=PGSC0003DMG400008160 ID=PGSC0003DMT400021076.v4.03 annot-version=v4.03
Sequence

ATGACTCCTGAAGATTCCTTAAGAACTCTCTCTTTAGATTATCTAAATCTCCTCATCAAT
GGTCAAGCTTTTAGTGATGTTACTTTTAGTGTTGAAGGTCGTTTAGTACATGCTCATAGA
TGTATCTTAGCTGCTAGAAGTCTCTTCTTTCGCAAATTCTTCTGCGGGCCGGAGTCATCT
TCTGTCTCCGGCCCGCGGTTGGGCCCGTTCGGCGCTGGCGCTGGACTAGCGTCGTCGCCG
AGGGGCACAACAAGTTGTTCACAGGTAATACCTGTGAACACTGTAGGGTATGAAGTGTTT
TTGTTGATGTTACAATTTTTGTATAGTGGACAAGTTTCAATTGTGCCACAAAAACATGAA
CCAAGGCCTAATTGTGGTGAAAGAAGCTGTTGGCATACACATTGCACTGCAGCCGTTGAT
CTTGCACTTGATACACTTACAGCCGCTAGATCTTTTGGAGTTGAACAACTTGCTTTGCTT
ACTCAGAAGCATTTGATAAGCATGGTGGAGAAAGCTTCAATTGAGGATGTGATGAAAGTT
TTAATAGCTTCAAGAAAACAAGACATGCATCAACTTTGGACTACTTGTTCTCATTTGATT
GCAAAATCAGGCCTCCCACCTGAAATCCTAACCAAACACCTCCCTATTGATGTTGTTGCT
AAAATCGAAGATCTCCGTCTCAAATCCTCTATATCGCGAAGATCTTTAATCCCTCATCAT
CATCACCATCATCACCAAATGTCCTCGAACATTGAGCTCGAGGACCAGAAGATCCGACGA
ATGAGACGAGCGCTCGATTCGTCGGACGTTGAACTAGTCAAACTTATGGTAATGGGAGAA
GGGTTAAATCTTGACGAGTCACTCGCCTTACATTACGCGGTTGAAAATTGTAGCCGCGAA
GTTGTAAAGGCTTTACTAGAGCTCGGCGCGGCCGAGGTTAATTATCAGGCCGGGCCGAGC
TGTAAAAGCCCGTTACACTTAGCGGCCGAAATGGTGTCACCAGATATGGTTGCGGTTCTT
CTAGATCATCATGCTGACCCGAATATCCAAACGGTGGATGGGATCACTCCACTCGATATT
CTACGAACCCTAACGTCCGATTTTTTATTCAAAGGTGCGATCCCGGGTCTAACTCATATC
GAACCAAATAAACTACGTCTATGTCTTGAGTTAGTTCAATCCGCGGCTATGGTAATTTCG
CGAGAGGAGGGTGAAGCGAATAATAATCAATCTTCGGAGAACATGTATACACATGTTCGC
GAAGATCATAGTTCGAGTACGAGCAGTGGAAACAACAACTTGAATTTGGATTCAAGAATG
GTGTATTTGAATCTTGGTGCAAATGTAGCAACGACTCATCATCAAATGGCATGCAAAATG
AATAATAATGAAGGTGATCATGATTGCAGCAGAAGCCACAATAATCAGAATCCATCAACA
ATGTACCATCATCATCATTCTCATGAGTATTAG