Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021073
CDS Infomation

pacid=37478845 polypeptide=PGSC0003DMP400014350 locus=PGSC0003DMG400008158 ID=PGSC0003DMT400021073.v4.03 annot-version=v4.03
Sequence

ATGAACGACGACGGATTTTCAGCGGAGAAGTTGTTCAACCAAGGCTACTCCTACACCTAC
GATGATGTCATCTTCCTCCCTGGCTTCATCGACTTCCCTACCGATGCCGTCAACCTCTCT
ACTAAGCTCAGCCGCAACATTTCCCTTTCCATCCCTTGCGTTGCTTCTCCGATGGACACC
GTCACTGAGACCTCCATGGCCATAGGAATGGCGGCGCTAGGTGGTATAGGTATCGTTCAC
TACAACAACACCATTTCGCAACAAGCTTCTATTGTCCGTGCTGCTAAGTCTCATCAAATC
CCTTTCTCATCGGATTTGATCTTTGCTTCCCCTTCCGATTCCATCCATTCTGCTGATGAA
TTTGGTAACTCTCCTTGTATTTTTGTCACTGAGTCAGGAACTAAGGAATCCAAAGTTTTA
GGTGTTGTATGTAAGTCTACTTGGAAGGGTTTGAGTGATAAGGAAGCTAGAATTTCTGAT
TACATGAACGCTTCTCCGGTTACTCTGCCTTCAAGCTATAATTTTGAGGATGTAGCAGGC
TACATTGCATCTAAAAAGCTGGACTTTGTACCATTGGTGAATGACAAGGACGGGGAAGTG
GTCAATTTGGTGACAGCTACTGACTTGGAGAGAATGAATTCGCTTCCCAAATTGGGTTTG
CCGTCTTTAGGGACAGACGGGAAGTTCTTGGTGGGGGCAGCAATAGGGACAAGGGATTCA
GATAAAGAGAGGCTGGAGCATTTGGTGAAAGCTGGGATTAACGCTCTCGTGATTGATAGC
TCGCAAGGGAACTCAGAGTATCAGATTAATATGATCAAGTATGTGAAACATACTTACCCT
CACTTGGATGTGATTGGTGGAAATATAGTCACTAAGTACCAAGCAGAGAACTTGATTAAG
CAGGATGTAGATGGATTGAGAGTCGGGATGGGATCCGGGTCCATTTGTACCACTCAAGAA
GTTTGTGCTGTGGGCCGCGGACAGGCGACTGCTGTTTACAAGGTGTCATCAATTGCTGAG
CAGCATGGTGTCCCTGTTATCGCTGATGGTGGGATTTCTAATTCTGGCCATATCGTGAAG
GCATTGTCGCTTGGAGCATCAACTGTCATGATGGGGAGCTTCTTGGCTGGAAGCAATGAA
GCTCCTGGCACTTATGAAAATAAGAATGGTCTCCGTGTGAAAAAGTATCGAGGTATGGGA
TCCTTGGAAGCAATGACAAAAGGGAGCGATGCAAGATACTTGGGTGATACTGCTAAACTA
AAGATTGCTCAGGGTGTCGTCGGTTCAGTTGCTGATAAGGGTTCTGTTCTGAAGTTCGTT
CCGTATACAATGCAAGCTGTAAAACAAGGATTCCAGGATCTAGGTGCTTCCTCGCTGCAG
TCTGCTCATCATCTCTTAAGATCAGGCTCATTGAGGCTAGAGGTCCGTACAGGAGCAGCA
CAAGTTGAAGGAGGGGTTCATGGTCTTGTCGGTTATGAGAAAAAATACTTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400014350
PEP Infomation

pacid=37478845 transcript=PGSC0003DMT400021073 locus=PGSC0003DMG400008158 ID=PGSC0003DMT400021073.v4.03 annot-version=v4.03
Sequence

MNDDGFSAEKLFNQGYSYTYDDVIFLPGFIDFPTDAVNLSTKLSRNISLSIPCVASPMDT
VTETSMAIGMAALGGIGIVHYNNTISQQASIVRAAKSHQIPFSSDLIFASPSDSIHSADE
FGNSPCIFVTESGTKESKVLGVVCKSTWKGLSDKEARISDYMNASPVTLPSSYNFEDVAG
YIASKKLDFVPLVNDKDGEVVNLVTATDLERMNSLPKLGLPSLGTDGKFLVGAAIGTRDS
DKERLEHLVKAGINALVIDSSQGNSEYQINMIKYVKHTYPHLDVIGGNIVTKYQAENLIK
QDVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAEQHGVPVIADGGISNSGHIVK
ALSLGASTVMMGSFLAGSNEAPGTYENKNGLRVKKYRGMGSLEAMTKGSDARYLGDTAKL
KIAQGVVGSVADKGSVLKFVPYTMQAVKQGFQDLGASSLQSAHHLLRSGSLRLEVRTGAA
QVEGGVHGLVGYEKKYF*

Transcript Sequence

Transcript ID

PGSC0003DMT400021073
Transcript Infomation

pacid=37478845 locus=PGSC0003DMG400008158 ID=PGSC0003DMT400021073.v4.03 annot-version=v4.03
Sequence

ATGAACGACGACGGATTTTCAGCGGAGAAGTTGTTCAACCAAGGCTACTCCTACACCTAC
GATGATGTCATCTTCCTCCCTGGCTTCATCGACTTCCCTACCGATGCCGTCAACCTCTCT
ACTAAGCTCAGCCGCAACATTTCCCTTTCCATCCCTTGCGTTGCTTCTCCGATGGACACC
GTCACTGAGACCTCCATGGCCATAGGAATGGCGGCGCTAGGTGGTATAGGTATCGTTCAC
TACAACAACACCATTTCGCAACAAGCTTCTATTGTCCGTGCTGCTAAGTCTCATCAAATC
CCTTTCTCATCGGATTTGATCTTTGCTTCCCCTTCCGATTCCATCCATTCTGCTGATGAA
TTTGGTAACTCTCCTTGTATTTTTGTCACTGAGTCAGGAACTAAGGAATCCAAAGTTTTA
GGTGTTGTATGTAAGTCTACTTGGAAGGGTTTGAGTGATAAGGAAGCTAGAATTTCTGAT
TACATGAACGCTTCTCCGGTTACTCTGCCTTCAAGCTATAATTTTGAGGATGTAGCAGGC
TACATTGCATCTAAAAAGCTGGACTTTGTACCATTGGTGAATGACAAGGACGGGGAAGTG
GTCAATTTGGTGACAGCTACTGACTTGGAGAGAATGAATTCGCTTCCCAAATTGGGTTTG
CCGTCTTTAGGGACAGACGGGAAGTTCTTGGTGGGGGCAGCAATAGGGACAAGGGATTCA
GATAAAGAGAGGCTGGAGCATTTGGTGAAAGCTGGGATTAACGCTCTCGTGATTGATAGC
TCGCAAGGGAACTCAGAGTATCAGATTAATATGATCAAGTATGTGAAACATACTTACCCT
CACTTGGATGTGATTGGTGGAAATATAGTCACTAAGTACCAAGCAGAGAACTTGATTAAG
CAGGATGTAGATGGATTGAGAGTCGGGATGGGATCCGGGTCCATTTGTACCACTCAAGAA
GTTTGTGCTGTGGGCCGCGGACAGGCGACTGCTGTTTACAAGGTGTCATCAATTGCTGAG
CAGCATGGTGTCCCTGTTATCGCTGATGGTGGGATTTCTAATTCTGGCCATATCGTGAAG
GCATTGTCGCTTGGAGCATCAACTGTCATGATGGGGAGCTTCTTGGCTGGAAGCAATGAA
GCTCCTGGCACTTATGAAAATAAGAATGGTCTCCGTGTGAAAAAGTATCGAGGTATGGGA
TCCTTGGAAGCAATGACAAAAGGGAGCGATGCAAGATACTTGGGTGATACTGCTAAACTA
AAGATTGCTCAGGGTGTCGTCGGTTCAGTTGCTGATAAGGGTTCTGTTCTGAAGTTCGTT
CCGTATACAATGCAAGCTGTAAAACAAGGATTCCAGGATCTAGGTGCTTCCTCGCTGCAG
TCTGCTCATCATCTCTTAAGATCAGGCTCATTGAGGCTAGAGGTCCGTACAGGAGCAGCA
CAAGTTGAAGGAGGGGTTCATGGTCTTGTCGGTTATGAGAAAAAATACTTCTGA