Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021072
CDS Infomation

pacid=37479047 polypeptide=PGSC0003DMP400014349 locus=PGSC0003DMG400008157 ID=PGSC0003DMT400021072.v4.03 annot-version=v4.03
Sequence

ATGGACAAACTATCTTCTAAAGGAACAATGTTTACTAAAGAAGAAGGTAGGAGTATCCGC
GGCGATGAAATATTTCCTGATGAATATCTCATCACAATTCGTCAAGCTTCAAACTCGAAC
TCTCATGAAATCAGTGAAAATGAGAGACAATGGCTAACTTCATTGGAGAAGAGCAGAGCA
TACCTTGACTCATTGCAGAATCCAAAAATTCAAAAGGTCCCAAAAATGCATCGCGATATT
GAATCAAACTTAAGGTGTTATGAGCCTCTTGTGGTTTCTATCGGTCCATTTCACCATGGA
AAACCAGAACTTCAACCTATGGAGAAGTACAAGAAGCTACTTGCTATTCAGTTAACTGAT
GAAAAAAGAGTTGAAGGCGACTTATCATGGCTTTCGACAAATTCAGTGTCTCTTGATGAG
CTTTACAGAAAGGTCAAGGACATTATGCCTGTTGTCAAGGAGTGTTATGCTGAGGAATCG
ATCAAAGATCACAACGATGAGGAGTTTGCACAGATGATGTTCCTGGATGGATGTTTCATC
TTTCAATACCTTCACTGCATTGTGACCAGTAATTATAAAGATCTGAAAATGAAGAGCCAT
GATATAGCTTTCATTCGTCGTGATCTGTTCTTACTTGAAAATCAGTTACCATTTGAAGTC
CTGGATGTGTTAATGAGTTGTAAGCTCAAGAACAATGTAGGAATGAAGATGATAACAACG
TTCATCTCGAGTGCACATACAAAACCTTCTCAACGTCAAGGATGCATTCAAAGTATCAAG
GATGTCTTTGTTGATTTCTTTAGTGATCTACGTCCTGAAAGCCCTACATGTAGTGAAAAA
GCTATGAACTTTCTTAGCAAGATTTGTGCAGGAGAACGTTCTGCCCTTAGCAAAGAAGAA
AGCACGAAAAAAACACGGCTTCCTGCTCATCTCCTTGAGATATTAAAAACAAATCTCATA
AACACAAAGGCTTTCACAGAAGGTGGATGCTATCTAAGGGGTGAGTGGTGCTCGTATCGT
TCAGCTATGGAGCTACGTAGAGCAGGAATCCGTTTCAGGCCTGGAAAGAGTCGTCGTCTT
TCAGAGGTTAAGTTCACTTCATTTCATTGCTCAGCTCTTTTAACACTTCCACCTATAACC
ATAGATGATTCAACCAAGTCACAGTTTTTAAACTTAGTCGCGTATGAAGCATGTCCTGAT
ACACCAGATGACTTTGGAATTACGTCTTATGTTAGTTTCATGGATTCACTTATCGATCAT
GCTGAAGACGTGAAGGAGCTAAGATCAAAAGGTATACTACTTAACTTTCTTGGAAGTGAT
AAAGAAGTAGCAGATTTGTTCAATGAGTTAGCAAGAGATTTGGTGCCGAATCCACATGCC
TTTGTTGATGTGAAAGACAAAATTGAGAAACATTACAATAGCAAAGGGAAAATATGGATT
GCTGAATGGAATAACACTCATTTTCACACTCCATGGACTGTTTTTGCATTCATTGCAGCA
CTTTTTGTCATTGGTTTGCAAGTTACTGATACATTTCTAGCAGGCATCCAAACCTTTTAT
GCAGTCCATCCAAAAAAAAACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400014349
PEP Infomation

pacid=37479047 transcript=PGSC0003DMT400021072 locus=PGSC0003DMG400008157 ID=PGSC0003DMT400021072.v4.03 annot-version=v4.03
Sequence

MDKLSSKGTMFTKEEGRSIRGDEIFPDEYLITIRQASNSNSHEISENERQWLTSLEKSRA
YLDSLQNPKIQKVPKMHRDIESNLRCYEPLVVSIGPFHHGKPELQPMEKYKKLLAIQLTD
EKRVEGDLSWLSTNSVSLDELYRKVKDIMPVVKECYAEESIKDHNDEEFAQMMFLDGCFI
FQYLHCIVTSNYKDLKMKSHDIAFIRRDLFLLENQLPFEVLDVLMSCKLKNNVGMKMITT
FISSAHTKPSQRQGCIQSIKDVFVDFFSDLRPESPTCSEKAMNFLSKICAGERSALSKEE
STKKTRLPAHLLEILKTNLINTKAFTEGGCYLRGEWCSYRSAMELRRAGIRFRPGKSRRL
SEVKFTSFHCSALLTLPPITIDDSTKSQFLNLVAYEACPDTPDDFGITSYVSFMDSLIDH
AEDVKELRSKGILLNFLGSDKEVADLFNELARDLVPNPHAFVDVKDKIEKHYNSKGKIWI
AEWNNTHFHTPWTVFAFIAALFVIGLQVTDTFLAGIQTFYAVHPKKN*

Transcript Sequence

Transcript ID

PGSC0003DMT400021072
Transcript Infomation

pacid=37479047 locus=PGSC0003DMG400008157 ID=PGSC0003DMT400021072.v4.03 annot-version=v4.03
Sequence

ATGGACAAACTATCTTCTAAAGGAACAATGTTTACTAAAGAAGAAGGTAGGAGTATCCGC
GGCGATGAAATATTTCCTGATGAATATCTCATCACAATTCGTCAAGCTTCAAACTCGAAC
TCTCATGAAATCAGTGAAAATGAGAGACAATGGCTAACTTCATTGGAGAAGAGCAGAGCA
TACCTTGACTCATTGCAGAATCCAAAAATTCAAAAGGTCCCAAAAATGCATCGCGATATT
GAATCAAACTTAAGGTGTTATGAGCCTCTTGTGGTTTCTATCGGTCCATTTCACCATGGA
AAACCAGAACTTCAACCTATGGAGAAGTACAAGAAGCTACTTGCTATTCAGTTAACTGAT
GAAAAAAGAGTTGAAGGCGACTTATCATGGCTTTCGACAAATTCAGTGTCTCTTGATGAG
CTTTACAGAAAGGTCAAGGACATTATGCCTGTTGTCAAGGAGTGTTATGCTGAGGAATCG
ATCAAAGATCACAACGATGAGGAGTTTGCACAGATGATGTTCCTGGATGGATGTTTCATC
TTTCAATACCTTCACTGCATTGTGACCAGTAATTATAAAGATCTGAAAATGAAGAGCCAT
GATATAGCTTTCATTCGTCGTGATCTGTTCTTACTTGAAAATCAGTTACCATTTGAAGTC
CTGGATGTGTTAATGAGTTGTAAGCTCAAGAACAATGTAGGAATGAAGATGATAACAACG
TTCATCTCGAGTGCACATACAAAACCTTCTCAACGTCAAGGATGCATTCAAAGTATCAAG
GATGTCTTTGTTGATTTCTTTAGTGATCTACGTCCTGAAAGCCCTACATGTAGTGAAAAA
GCTATGAACTTTCTTAGCAAGATTTGTGCAGGAGAACGTTCTGCCCTTAGCAAAGAAGAA
AGCACGAAAAAAACACGGCTTCCTGCTCATCTCCTTGAGATATTAAAAACAAATCTCATA
AACACAAAGGCTTTCACAGAAGGTGGATGCTATCTAAGGGGTGAGTGGTGCTCGTATCGT
TCAGCTATGGAGCTACGTAGAGCAGGAATCCGTTTCAGGCCTGGAAAGAGTCGTCGTCTT
TCAGAGGTTAAGTTCACTTCATTTCATTGCTCAGCTCTTTTAACACTTCCACCTATAACC
ATAGATGATTCAACCAAGTCACAGTTTTTAAACTTAGTCGCGTATGAAGCATGTCCTGAT
ACACCAGATGACTTTGGAATTACGTCTTATGTTAGTTTCATGGATTCACTTATCGATCAT
GCTGAAGACGTGAAGGAGCTAAGATCAAAAGGTATACTACTTAACTTTCTTGGAAGTGAT
AAAGAAGTAGCAGATTTGTTCAATGAGTTAGCAAGAGATTTGGTGCCGAATCCACATGCC
TTTGTTGATGTGAAAGACAAAATTGAGAAACATTACAATAGCAAAGGGAAAATATGGATT
GCTGAATGGAATAACACTCATTTTCACACTCCATGGACTGTTTTTGCATTCATTGCAGCA
CTTTTTGTCATTGGTTTGCAAGTTACTGATACATTTCTAGCAGGCATCCAAACCTTTTAT
GCAGTCCATCCAAAAAAAAACTAG