Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021045
CDS Infomation

pacid=37478619 polypeptide=PGSC0003DMP400014328 locus=PGSC0003DMG400008144 ID=PGSC0003DMT400021045.v4.03 annot-version=v4.03
Sequence

ATGGGTGATATAGCCAAGGATTTAACAGCTGGGACTGTAGGTGGTGTAGCACAATTGGTC
GTTGGTCACCCTTTTGATACCATAAAGGTCAAGCTTCAAAGCCAGCCTACTCCACTTCCA
GGGCAGCTTCCAAGATATTCTGGTGCTATAGATGCTGTCCGGCAAACAGTAGCTGCGGAA
GGTGCCGGGGGGTTGTTCAAAGGCATGGGAGCCCCACTTGCCACTGTGGCAGCCTTTAAT
GCTGTGCTCTTCACCGTGAGAGGTCAAACAGAGGCATTCTTGAGGTCTGAACCTGGAGTC
CCTCTTACTGTGAACCAGCAAATCGTTTGCGGGGCTGTTGCTGGAACTGCTGTGTCTTTT
CTTGCTTGCCCAACTGAGCTTATAAAATGCAGATTGCAAGCTCAGGGTGCATTGGCAAGT
ATAGGCTCAGCTGCTGTGGCAGTGAAATATGCAGGGCCAATGGATGTAGCAAGACATGTT
CTTCAATCCGAAGGAGGCATGAGGGGTCTCTTCAAGGGCTTGTTTCCCACCATGGCACGT
GAAATACCCGGAAATGCTGCTATGTTTGGCATGTATGAAGCACTAAAGCAGTACTTTGCA
GGAGGCACAGACACTTCAGGGTTGGGAAGAGGTTCTCTTATTGTAGCAGGTGGCCTGGCT
GGTGGTTCCTTCTGGATCTCCGTGTATCCAACAGATGTCATCAAGAGTGTAATCCAGATC
GATGACTATAAAAACCCAAAATTCTCTGGCTTTTTTGACGCTTTCAAGAAGATCTTGGCA
TCGGAGGGAATCAAAGGCCTTTACAAGGGCTTTGGACCTGCTATGGGACGTAGTGTCCCT
GCAAATGCTGCATGTTTCTTGGCGTATGAGATGGCTAAGTCTAGTTTGGGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400014328
PEP Infomation

pacid=37478619 transcript=PGSC0003DMT400021045 locus=PGSC0003DMG400008144 ID=PGSC0003DMT400021045.v4.03 annot-version=v4.03
Sequence

MGDIAKDLTAGTVGGVAQLVVGHPFDTIKVKLQSQPTPLPGQLPRYSGAIDAVRQTVAAE
GAGGLFKGMGAPLATVAAFNAVLFTVRGQTEAFLRSEPGVPLTVNQQIVCGAVAGTAVSF
LACPTELIKCRLQAQGALASIGSAAVAVKYAGPMDVARHVLQSEGGMRGLFKGLFPTMAR
EIPGNAAMFGMYEALKQYFAGGTDTSGLGRGSLIVAGGLAGGSFWISVYPTDVIKSVIQI
DDYKNPKFSGFFDAFKKILASEGIKGLYKGFGPAMGRSVPANAACFLAYEMAKSSLG*

Transcript Sequence

Transcript ID

PGSC0003DMT400021045
Transcript Infomation

pacid=37478619 locus=PGSC0003DMG400008144 ID=PGSC0003DMT400021045.v4.03 annot-version=v4.03
Sequence

ATGGGTGATATAGCCAAGGATTTAACAGCTGGGACTGTAGGTGGTGTAGCACAATTGGTC
GTTGGTCACCCTTTTGATACCATAAAGGTCAAGCTTCAAAGCCAGCCTACTCCACTTCCA
GGGCAGCTTCCAAGATATTCTGGTGCTATAGATGCTGTCCGGCAAACAGTAGCTGCGGAA
GGTGCCGGGGGGTTGTTCAAAGGCATGGGAGCCCCACTTGCCACTGTGGCAGCCTTTAAT
GCTGTGCTCTTCACCGTGAGAGGTCAAACAGAGGCATTCTTGAGGTCTGAACCTGGAGTC
CCTCTTACTGTGAACCAGCAAATCGTTTGCGGGGCTGTTGCTGGAACTGCTGTGTCTTTT
CTTGCTTGCCCAACTGAGCTTATAAAATGCAGATTGCAAGCTCAGGGTGCATTGGCAAGT
ATAGGCTCAGCTGCTGTGGCAGTGAAATATGCAGGGCCAATGGATGTAGCAAGACATGTT
CTTCAATCCGAAGGAGGCATGAGGGGTCTCTTCAAGGGCTTGTTTCCCACCATGGCACGT
GAAATACCCGGAAATGCTGCTATGTTTGGCATGTATGAAGCACTAAAGCAGTACTTTGCA
GGAGGCACAGACACTTCAGGGTTGGGAAGAGGTTCTCTTATTGTAGCAGGTGGCCTGGCT
GGTGGTTCCTTCTGGATCTCCGTGTATCCAACAGATGTCATCAAGAGTGTAATCCAGATC
GATGACTATAAAAACCCAAAATTCTCTGGCTTTTTTGACGCTTTCAAGAAGATCTTGGCA
TCGGAGGGAATCAAAGGCCTTTACAAGGGCTTTGGACCTGCTATGGGACGTAGTGTCCCT
GCAAATGCTGCATGTTTCTTGGCGTATGAGATGGCTAAGTCTAGTTTGGGATAA