Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400021019
CDS Infomation

pacid=37478544 polypeptide=PGSC0003DMP400014315 locus=PGSC0003DMG400008138 ID=PGSC0003DMT400021019.v4.03 annot-version=v4.03
Sequence

ATGGCCGAGAACTACCCCATAAAAAGCGATGGCAAAAAGGGTGTTCAGGATGCACAAGTG
GCAGTGGTTATGGTGCCACTTTCAGCACAAGGCCATCTCAACCAGCTTCTCCACCTCTCG
AGGCTCATCACCTCGTATAATATCCCAGTCCATTATGTTGGAGCAACCACTCATATTCGC
CAGGCTAAGTTTCGTGTCCATGGCTTCGATCCTGTCACAGCTAAAAATCTATATTTTCAT
GAATTCCCTACACCACCTTTTGAAAATCCCCCTCCAAATCCTAATGCTTCAAATAAATTT
CCTAACCAATTAATCCCTTCATTTTATGCAACAATCCATCTCCGTGAGCCAGTGTGCTCT
CTTGTACGCCAACTACTAGGCGTCAATCATCGGAGAGTGATTGTTATTTATGATTCTATG
ATGAGTTGGGTAGTAGAGGATGTGCCAGCAATTCCAAATGCTGAGTGCTACTGTTTTAAT
AGTATCTCAGCTTTCCATACGTTTTCATGCATCTGGGAATCCAGAGGAAAACCTTTACAA
GCTGGAACAGAAATATTTGAGGGCATTTCATCAAACAAAAACTGTGCTACCCCAGAGTTA
TGGGAATTATGGAGGAAACAAGAAGCCCTAATGAGGAAAGTTAGCTCCGGAGAACTTTAC
AATTCATCTAGAGTAATTGAAGGTTTATACCTTGATTTAGTAGCCAAAGAAAATGATGGA
CTAAACCAATGGGCTCTTGGTCCATTCAATCCGTTGTTGTCTGAGCAGAACAAAAACTCA
AATAAACACCATCAAACCCTGTATTGGCTTGACAAACAAGAAACAAACTCGGTAATATAT
GTGTCTTTTGGAACAACTACTTCCTTGTCGAATGAAGAAATTGAAGAACTCGCTGTTGGA
TTAGAGAAAAGTATGCAAAAGTTCATTTGGGTCCTCAGAGATGCTGACAAAGGAGATGTG
TTTGCAGGTGAAGAAAGGAGAGCTCAATTGCCTGATGGTTATGAAGAGAGGCTAAAAGGA
AGAGGAATTATTGTAAGAGATTGGGCACCTCAGTTGGAAATTTTGGCACATCCTTCCACA
GGTGGTTTTATGAGTCATTGCGGATGGAATTCGTGCATGGAAAGCATTTCTATGGGAGTT
CCTATAGCAGCTTGGCCAATGCATTCAGATCAACCAAGGAATTCTCAGTTAGTAACTAAG
TTCCTAAAAATCGGCCTAATTGTGAGGCATTGGGCATGTCGAGATGAATTGGTTACATCA
GAAATAGTTGAAAATGCTGTAAGAACTTTGATGGCTTCACCTGAGGGAGATGAAATGAGG
AAGAGAGCATCAGAATTAAGTAATGTTGTCAAACAATCAGTGGTGGATGGGGGTGTTAAC
CGTGAGGAGATGGATTCTTTTATCACTCACATTACTCGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400014315
PEP Infomation

pacid=37478544 transcript=PGSC0003DMT400021019 locus=PGSC0003DMG400008138 ID=PGSC0003DMT400021019.v4.03 annot-version=v4.03
Sequence

MAENYPIKSDGKKGVQDAQVAVVMVPLSAQGHLNQLLHLSRLITSYNIPVHYVGATTHIR
QAKFRVHGFDPVTAKNLYFHEFPTPPFENPPPNPNASNKFPNQLIPSFYATIHLREPVCS
LVRQLLGVNHRRVIVIYDSMMSWVVEDVPAIPNAECYCFNSISAFHTFSCIWESRGKPLQ
AGTEIFEGISSNKNCATPELWELWRKQEALMRKVSSGELYNSSRVIEGLYLDLVAKENDG
LNQWALGPFNPLLSEQNKNSNKHHQTLYWLDKQETNSVIYVSFGTTTSLSNEEIEELAVG
LEKSMQKFIWVLRDADKGDVFAGEERRAQLPDGYEERLKGRGIIVRDWAPQLEILAHPST
GGFMSHCGWNSCMESISMGVPIAAWPMHSDQPRNSQLVTKFLKIGLIVRHWACRDELVTS
EIVENAVRTLMASPEGDEMRKRASELSNVVKQSVVDGGVNREEMDSFITHITR*

Transcript Sequence

Transcript ID

PGSC0003DMT400021019
Transcript Infomation

pacid=37478544 locus=PGSC0003DMG400008138 ID=PGSC0003DMT400021019.v4.03 annot-version=v4.03
Sequence

ATGGCCGAGAACTACCCCATAAAAAGCGATGGCAAAAAGGGTGTTCAGGATGCACAAGTG
GCAGTGGTTATGGTGCCACTTTCAGCACAAGGCCATCTCAACCAGCTTCTCCACCTCTCG
AGGCTCATCACCTCGTATAATATCCCAGTCCATTATGTTGGAGCAACCACTCATATTCGC
CAGGCTAAGTTTCGTGTCCATGGCTTCGATCCTGTCACAGCTAAAAATCTATATTTTCAT
GAATTCCCTACACCACCTTTTGAAAATCCCCCTCCAAATCCTAATGCTTCAAATAAATTT
CCTAACCAATTAATCCCTTCATTTTATGCAACAATCCATCTCCGTGAGCCAGTGTGCTCT
CTTGTACGCCAACTACTAGGCGTCAATCATCGGAGAGTGATTGTTATTTATGATTCTATG
ATGAGTTGGGTAGTAGAGGATGTGCCAGCAATTCCAAATGCTGAGTGCTACTGTTTTAAT
AGTATCTCAGCTTTCCATACGTTTTCATGCATCTGGGAATCCAGAGGAAAACCTTTACAA
GCTGGAACAGAAATATTTGAGGGCATTTCATCAAACAAAAACTGTGCTACCCCAGAGTTA
TGGGAATTATGGAGGAAACAAGAAGCCCTAATGAGGAAAGTTAGCTCCGGAGAACTTTAC
AATTCATCTAGAGTAATTGAAGGTTTATACCTTGATTTAGTAGCCAAAGAAAATGATGGA
CTAAACCAATGGGCTCTTGGTCCATTCAATCCGTTGTTGTCTGAGCAGAACAAAAACTCA
AATAAACACCATCAAACCCTGTATTGGCTTGACAAACAAGAAACAAACTCGGTAATATAT
GTGTCTTTTGGAACAACTACTTCCTTGTCGAATGAAGAAATTGAAGAACTCGCTGTTGGA
TTAGAGAAAAGTATGCAAAAGTTCATTTGGGTCCTCAGAGATGCTGACAAAGGAGATGTG
TTTGCAGGTGAAGAAAGGAGAGCTCAATTGCCTGATGGTTATGAAGAGAGGCTAAAAGGA
AGAGGAATTATTGTAAGAGATTGGGCACCTCAGTTGGAAATTTTGGCACATCCTTCCACA
GGTGGTTTTATGAGTCATTGCGGATGGAATTCGTGCATGGAAAGCATTTCTATGGGAGTT
CCTATAGCAGCTTGGCCAATGCATTCAGATCAACCAAGGAATTCTCAGTTAGTAACTAAG
TTCCTAAAAATCGGCCTAATTGTGAGGCATTGGGCATGTCGAGATGAATTGGTTACATCA
GAAATAGTTGAAAATGCTGTAAGAACTTTGATGGCTTCACCTGAGGGAGATGAAATGAGG
AAGAGAGCATCAGAATTAAGTAATGTTGTCAAACAATCAGTGGTGGATGGGGGTGTTAAC
CGTGAGGAGATGGATTCTTTTATCACTCACATTACTCGATAA