Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020997
CDS Infomation

pacid=37478402 polypeptide=PGSC0003DMP400014301 locus=PGSC0003DMG400008132 ID=PGSC0003DMT400020997.v4.03 annot-version=v4.03
Sequence

ATGCTCCGTTCCTTCACTTCCAAACGCTCTCTCCAATCCCTTCTCCACCACCACCACCGC
CGCTGCCGTCAGAATCCCCAATTCCCAATCTTCAATCCCCGTCTCTTTTCATCTTCTCCG
GGACCTCCGTCTTCCGACGCCGAGCTCCGGAAATACATCGGATACACAATTCTCGTCTTA
GGTTCTGCTGCCGCCACATATTATTCCTTTCCATTCTCGGAAAACGCGAGAGACAAAAAA
GCTCAGCTATTTCGGTATGCTCCGTTGCCGGATGATCTTCATACTGTGTCTAATTGGAGT
GGGACCCATGAGGTTCGAACTCGGACTTTTTTGCAACCCGAGTCAATTGAAGAGCTTGAA
GGGATAGTGAAAGAAGCGAATGTGAGGAAGCATAAGATCCGGCCGGTTGGGTCGGGTTTG
TCGCCGAATGGGATTGGGTTAACACGAGCTGGGATGGTGAATCTGGCGTTAATGGATAAG
GTTTTGAGTGTGGATAAGGAGAAGAAAAGGGTTACTGTTCAAGCTGGGATTCGGGTTCAG
CAGCTTGTGGATGAGATTAAGGAGTTTGGGATTACTCTTCAGAACTTTGCTTCCATAAGA
GAACAGCAGATTGGTGGCATTGTTCAGGTTGGTGCCCATGGTACTGGTGCCAGGTTGCCT
CCAATTGATGAACAAGTCATAAGCATGAAATTGGTTACCCCTGCTAAGGGCACAATAGAA
ATTTCAAAAGAGAAAGATCCAGAATTCTTTTATCTAGCTCGATGTGGACTTGGGGGACTT
GGTGTGGTTGCAGAAGTCACTCTTCAGTGTGTTGAGAGGCAGGAGCTTGTAGAACATACT
TTCCTGTCTAACATGAAAGATATCAAGAAAAATCACAAGAAATTCCTATCTGAGAACAAG
CATGTCAAATACTTGTACATTCCATATACTGATGCAGTTGTGGTTGTGACATGCAATCCT
ATGTCTAAGAGGAAAGGTCCACCAAAGAATAAACCTAAATATACTACAGAAGAAGCCTTG
CAGCATGTCCGAGATCTCTATTTGGAGTCGTTGACTAAGTACAGAGGTCAAGTTACTGAT
TCTGGTTCTCCAGATGAACCTGAAATAGTTGAACTATCATTCACTGAACTGAGAGATAAA
CTACTTGCGATGGATCCTCTCAACAAGGAGCATGTAATTAAAGTCAACAAAGCTGAGGCA
GAATACTGGAGGAAATCAGAAGGGTATCGAGTTGGCTGGAGTGATGAAATTTTAGGGTTC
GACTGTGGTGGCCACCAGTGGGTATCAGAGACATGTTTCCCTGCAGGAACACTGTCAAAG
CCTAGCATGAAAGACCTGGAGTACATAGAGGAGTTGATGCAGCTCATTGAGAAAGAAAGT
GTACCTGCCCCTGCACCTATAGAGCAGAGATGGACTGCTAGCAGTAAAAGTCGAATGAGT
CCAGCTTATAGCTTAGCGGATGATGATATATTCTCATGGGTTGGAATTATCATGTATCTT
CCAACCATGGATACTCGGCAGAGAAGGCAAATCACGGAGGAGTTCTTCCACTACAGGCAT
ATGACGCAAGCACAGTTGTGGGGTCATTATTCTGCTTTTGAACATTGGGCAAAGATTGAG
GTTCCCAAGGACAAGGAAGAGCTCGCAGCTCTGCAGGCAAGGCTAAAGAAGAAATTCCCT
GTGGATTCATACAATCAAGCGCGAAAGGAGCTGGACCCAAACCGCATCCTATCTAATAAC
ATGCTTGAGAAGCTCTTCCCTTCCCTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400014301
PEP Infomation

pacid=37478402 transcript=PGSC0003DMT400020997 locus=PGSC0003DMG400008132 ID=PGSC0003DMT400020997.v4.03 annot-version=v4.03
Sequence

MLRSFTSKRSLQSLLHHHHRRCRQNPQFPIFNPRLFSSSPGPPSSDAELRKYIGYTILVL
GSAAATYYSFPFSENARDKKAQLFRYAPLPDDLHTVSNWSGTHEVRTRTFLQPESIEELE
GIVKEANVRKHKIRPVGSGLSPNGIGLTRAGMVNLALMDKVLSVDKEKKRVTVQAGIRVQ
QLVDEIKEFGITLQNFASIREQQIGGIVQVGAHGTGARLPPIDEQVISMKLVTPAKGTIE
ISKEKDPEFFYLARCGLGGLGVVAEVTLQCVERQELVEHTFLSNMKDIKKNHKKFLSENK
HVKYLYIPYTDAVVVVTCNPMSKRKGPPKNKPKYTTEEALQHVRDLYLESLTKYRGQVTD
SGSPDEPEIVELSFTELRDKLLAMDPLNKEHVIKVNKAEAEYWRKSEGYRVGWSDEILGF
DCGGHQWVSETCFPAGTLSKPSMKDLEYIEELMQLIEKESVPAPAPIEQRWTASSKSRMS
PAYSLADDDIFSWVGIIMYLPTMDTRQRRQITEEFFHYRHMTQAQLWGHYSAFEHWAKIE
VPKDKEELAALQARLKKKFPVDSYNQARKELDPNRILSNNMLEKLFPSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400020997
Transcript Infomation

pacid=37478402 locus=PGSC0003DMG400008132 ID=PGSC0003DMT400020997.v4.03 annot-version=v4.03
Sequence

ATGCTCCGTTCCTTCACTTCCAAACGCTCTCTCCAATCCCTTCTCCACCACCACCACCGC
CGCTGCCGTCAGAATCCCCAATTCCCAATCTTCAATCCCCGTCTCTTTTCATCTTCTCCG
GGACCTCCGTCTTCCGACGCCGAGCTCCGGAAATACATCGGATACACAATTCTCGTCTTA
GGTTCTGCTGCCGCCACATATTATTCCTTTCCATTCTCGGAAAACGCGAGAGACAAAAAA
GCTCAGCTATTTCGGTATGCTCCGTTGCCGGATGATCTTCATACTGTGTCTAATTGGAGT
GGGACCCATGAGGTTCGAACTCGGACTTTTTTGCAACCCGAGTCAATTGAAGAGCTTGAA
GGGATAGTGAAAGAAGCGAATGTGAGGAAGCATAAGATCCGGCCGGTTGGGTCGGGTTTG
TCGCCGAATGGGATTGGGTTAACACGAGCTGGGATGGTGAATCTGGCGTTAATGGATAAG
GTTTTGAGTGTGGATAAGGAGAAGAAAAGGGTTACTGTTCAAGCTGGGATTCGGGTTCAG
CAGCTTGTGGATGAGATTAAGGAGTTTGGGATTACTCTTCAGAACTTTGCTTCCATAAGA
GAACAGCAGATTGGTGGCATTGTTCAGGTTGGTGCCCATGGTACTGGTGCCAGGTTGCCT
CCAATTGATGAACAAGTCATAAGCATGAAATTGGTTACCCCTGCTAAGGGCACAATAGAA
ATTTCAAAAGAGAAAGATCCAGAATTCTTTTATCTAGCTCGATGTGGACTTGGGGGACTT
GGTGTGGTTGCAGAAGTCACTCTTCAGTGTGTTGAGAGGCAGGAGCTTGTAGAACATACT
TTCCTGTCTAACATGAAAGATATCAAGAAAAATCACAAGAAATTCCTATCTGAGAACAAG
CATGTCAAATACTTGTACATTCCATATACTGATGCAGTTGTGGTTGTGACATGCAATCCT
ATGTCTAAGAGGAAAGGTCCACCAAAGAATAAACCTAAATATACTACAGAAGAAGCCTTG
CAGCATGTCCGAGATCTCTATTTGGAGTCGTTGACTAAGTACAGAGGTCAAGTTACTGAT
TCTGGTTCTCCAGATGAACCTGAAATAGTTGAACTATCATTCACTGAACTGAGAGATAAA
CTACTTGCGATGGATCCTCTCAACAAGGAGCATGTAATTAAAGTCAACAAAGCTGAGGCA
GAATACTGGAGGAAATCAGAAGGGTATCGAGTTGGCTGGAGTGATGAAATTTTAGGGTTC
GACTGTGGTGGCCACCAGTGGGTATCAGAGACATGTTTCCCTGCAGGAACACTGTCAAAG
CCTAGCATGAAAGACCTGGAGTACATAGAGGAGTTGATGCAGCTCATTGAGAAAGAAAGT
GTACCTGCCCCTGCACCTATAGAGCAGAGATGGACTGCTAGCAGTAAAAGTCGAATGAGT
CCAGCTTATAGCTTAGCGGATGATGATATATTCTCATGGGTTGGAATTATCATGTATCTT
CCAACCATGGATACTCGGCAGAGAAGGCAAATCACGGAGGAGTTCTTCCACTACAGGCAT
ATGACGCAAGCACAGTTGTGGGGTCATTATTCTGCTTTTGAACATTGGGCAAAGATTGAG
GTTCCCAAGGACAAGGAAGAGCTCGCAGCTCTGCAGGCAAGGCTAAAGAAGAAATTCCCT
GTGGATTCATACAATCAAGCGCGAAAGGAGCTGGACCCAAACCGCATCCTATCTAATAAC
ATGCTTGAGAAGCTCTTCCCTTCCCTCTGA