Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020996
CDS Infomation

pacid=37479544 polypeptide=PGSC0003DMP400014300 locus=PGSC0003DMG400008131 ID=PGSC0003DMT400020996.v4.03 annot-version=v4.03
Sequence

ATGGATATCAAATTTTTCATGTTTTCATTCATTCTAACCTCACTTTTCCTCATTCTTATC
TACATGCCTACCCAATTTTCCCACTCACCCATCACCATTTTCAAGCCAAAAAAAACTTTC
ATAATCTCAAATACCACAACTAACCCTTACCCTGTAAAATTTGCTTACTTGATCTCTGCT
TCTAAAGGAGATGTACCAAAGCTAAAAAGACTTCTTTTTTCACTTTACCATCCTGGTAAT
TTTTACTTGATTCACTTAGATTTAGATGCACCAGAAAATGAACACCAAGAAATTTCAAGA
TTTGTGAGTGACAACTCTGTTTTTGGAGAAATTAATAATGTTTGGGTTGTTGGAAAGCCA
AATTTAGTGACATATAGAGGACCAACTATGTTAGCTACAACACTACATGCAATGGCTATG
CTTTTGAAGATTGCTAAATGGGATTGGTTTATTAATCTAAGTGCCTCTGATTATCCTTTA
GTTACTCAAGATGATCTGATCCATGCCTTCTCTGACTTACCAAGGGATCTTAATTTTGTA
CAACACACTAGCCACATGGGGTGGAAACTGAATAAGAGAGGAAAGCCAATTATTATAGAT
CCTGGTCTTCATACTCTAAACAAATCAGAGATTTGGTGGGTTATCAAGCAAAGAAGTCTT
CCAACTGCTTTCAAGCTTTATACAGGTTCAGCTTGGACAATATTGTCTAGATCCTTTGCT
GAATACTGCATAATAGGCTGGGAAAATCTTCCAAGAACTCTACTTCTTTACTACACAAAT
TTTGTGTCATCTCCAGAGGGTTATTTCCAAACAGTCATATGTAACTCTGAGGAATACAAG
AACACCACAGTGAACCATGATCTTCACTACATTGCATGGGACATTCCCCCGAAACAACAT
CCGAGATCCCTCGGTCCGAAGGATTTCAGGAGAATGGTCTTGAGTAACAGGCCATTCGCT
CGGAAGTTCAAGAACAACAACGTTGTCCTTAATAAAATTGATCGCGATCTTCTTAGAAGA
CAAAATGGACAGTACTTCTCAGCCGGAGGATGGTGCTCCAATGACAATGATCGAGGTTGT
TTGAATCTACAGGTTGAGAAATATGGCGTTTTAAAGCCTGGAACAGGTGCGAGAAGGTTG
AGAACATTATTGAAGAAATTGGTATCTGCACCACATTTTGCTAAGAGGCAGTGTAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400014300
PEP Infomation

pacid=37479544 transcript=PGSC0003DMT400020996 locus=PGSC0003DMG400008131 ID=PGSC0003DMT400020996.v4.03 annot-version=v4.03
Sequence

MDIKFFMFSFILTSLFLILIYMPTQFSHSPITIFKPKKTFIISNTTTNPYPVKFAYLISA
SKGDVPKLKRLLFSLYHPGNFYLIHLDLDAPENEHQEISRFVSDNSVFGEINNVWVVGKP
NLVTYRGPTMLATTLHAMAMLLKIAKWDWFINLSASDYPLVTQDDLIHAFSDLPRDLNFV
QHTSHMGWKLNKRGKPIIIDPGLHTLNKSEIWWVIKQRSLPTAFKLYTGSAWTILSRSFA
EYCIIGWENLPRTLLLYYTNFVSSPEGYFQTVICNSEEYKNTTVNHDLHYIAWDIPPKQH
PRSLGPKDFRRMVLSNRPFARKFKNNNVVLNKIDRDLLRRQNGQYFSAGGWCSNDNDRGC
LNLQVEKYGVLKPGTGARRLRTLLKKLVSAPHFAKRQCR*

Transcript Sequence

Transcript ID

PGSC0003DMT400020996
Transcript Infomation

pacid=37479544 locus=PGSC0003DMG400008131 ID=PGSC0003DMT400020996.v4.03 annot-version=v4.03
Sequence

ATGGATATCAAATTTTTCATGTTTTCATTCATTCTAACCTCACTTTTCCTCATTCTTATC
TACATGCCTACCCAATTTTCCCACTCACCCATCACCATTTTCAAGCCAAAAAAAACTTTC
ATAATCTCAAATACCACAACTAACCCTTACCCTGTAAAATTTGCTTACTTGATCTCTGCT
TCTAAAGGAGATGTACCAAAGCTAAAAAGACTTCTTTTTTCACTTTACCATCCTGGTAAT
TTTTACTTGATTCACTTAGATTTAGATGCACCAGAAAATGAACACCAAGAAATTTCAAGA
TTTGTGAGTGACAACTCTGTTTTTGGAGAAATTAATAATGTTTGGGTTGTTGGAAAGCCA
AATTTAGTGACATATAGAGGACCAACTATGTTAGCTACAACACTACATGCAATGGCTATG
CTTTTGAAGATTGCTAAATGGGATTGGTTTATTAATCTAAGTGCCTCTGATTATCCTTTA
GTTACTCAAGATGATCTGATCCATGCCTTCTCTGACTTACCAAGGGATCTTAATTTTGTA
CAACACACTAGCCACATGGGGTGGAAACTGAATAAGAGAGGAAAGCCAATTATTATAGAT
CCTGGTCTTCATACTCTAAACAAATCAGAGATTTGGTGGGTTATCAAGCAAAGAAGTCTT
CCAACTGCTTTCAAGCTTTATACAGGTTCAGCTTGGACAATATTGTCTAGATCCTTTGCT
GAATACTGCATAATAGGCTGGGAAAATCTTCCAAGAACTCTACTTCTTTACTACACAAAT
TTTGTGTCATCTCCAGAGGGTTATTTCCAAACAGTCATATGTAACTCTGAGGAATACAAG
AACACCACAGTGAACCATGATCTTCACTACATTGCATGGGACATTCCCCCGAAACAACAT
CCGAGATCCCTCGGTCCGAAGGATTTCAGGAGAATGGTCTTGAGTAACAGGCCATTCGCT
CGGAAGTTCAAGAACAACAACGTTGTCCTTAATAAAATTGATCGCGATCTTCTTAGAAGA
CAAAATGGACAGTACTTCTCAGCCGGAGGATGGTGCTCCAATGACAATGATCGAGGTTGT
TTGAATCTACAGGTTGAGAAATATGGCGTTTTAAAGCCTGGAACAGGTGCGAGAAGGTTG
AGAACATTATTGAAGAAATTGGTATCTGCACCACATTTTGCTAAGAGGCAGTGTAGATAA