Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020972
CDS Infomation

pacid=37465335 polypeptide=PGSC0003DMP400014286 locus=PGSC0003DMG400008119 ID=PGSC0003DMT400020972.v4.03 annot-version=v4.03
Sequence

ATGGTGTCGGATGCGGCGAAGAAGAGAGATGCGCAGAAGAAGGCGGCAGCAGCTGCTAGG
AGAGGAGGTAAAGGTGCGGCAGCGTCTAAATCGGCTGCGACGGCGTCTAAATCTGCGGGG
GAAAGTAACGGGGTTGATAATTTGACGAATGGAGTAGGGGATCTACAGATATCTGATCGG
ACTTGTACGGGTGTTTTATGTTCACATCCGCTATCGAGGGATATTCGGATAGAATCATTA
TCAGTCACTTTCCACGGACATGATCTAATCGTTGATTCTGAACTGGAGCTCAACTATGGC
AGACGTTATGGTTTGTTGGGATTGAATGGCTGCGGGAAGTCTACTCTTCTTACCGCTATA
GGGTTGAGGGAACTTCCCATCCCAGACCACATGGATATTTTTCATCTTTCTCGGGAGATT
GATGCCTCTGACATGACCTCTCTCGAGGCCGTCATTAATTGTGATGAAGAGAGGTTGCAA
TTGGAGAAAGAAGCTGAAGCTTTGGCTGCACAGGATGATGGTGGTGGAGAGCAACTTGAA
CGGATCTATGAGCGTTTAGAAGCTATGGATGCTGCCACTGCTGAGAAACGTGCTGCTGAA
ATCTTGTTTGGGCTTGGATTTGATAAGAAAATGCAAGCAAAGAAAACACGCGATTTTTCT
GGTGGCTGGAGAATGAGGATTGCTCTTGCCCGTGCCCTCTTTATGAATCCAACAATTTTG
TTGCTTGATGAGCCAACAAACCATCTTGACCTAGAAGCCTGTGTGTGGTTAGAAGAATCC
TTGAAGAACTTTGAGCGCATTCTGGTTGTCATTTCACACTCACAGGATTTTCTCAATGGT
GTGTGTACCAATATCATCCACATGCAAAACAAGAAGTTGAAACTCTATACAGGTAACTAC
GACCAATATGTGCAAACCCGTTCAGAGCTGGAAGAGAACCAGATGAAACAGTACAAGTGG
GAGCAGGAGCAGATTTCTGCAATGAAGGAATACATTGCTCGCTTTGGGCACGGTTCAGCT
AAACTAGCCCGTCAAGCACAGAGTAAAGAGAAGACATTGGCTAAGATGGAGCGTGGTGGG
CTTACTGAGAAGGTGGGGAGGGACAGCGTCCTGGTTTTCCGGTTTACTGATGTCGGCAAA
CTTCCTCCTCCAGTTCTACAGTTTTCTGAAGTTGCTTTTGGCTACACACCTGAAAACCTC
ATCTACAAGAACCTTGATTTTGGTGTAGATCTCGACTCCAGGGTAGCACTTGTAGGGCCT
AATGGAGCTGGAAAGAGCACACTGCTTAAGCTGATGATAGGGGAGTTATTTCCCACTGAT
GGCATGGTTAAGCGGCATAATCACCTAAAAATTGCACAGTACCACCAGCACTTGACTGAG
AAGCTAGACATGGAGGTGTCAGCTCTTTTGTACATGATGAGAGAGTACCCTGGGAATGAG
GAGGAGAAGATGAGGGCAGCAATTGGGAGGTTTGGACTCACAGGTAAAGCTCAAGTAATG
GCTATGAAGAACTTGTCAGATGGTCAACGTAGTCGGGTGATCTTTGCATGGTTGGCTTTT
AGACAACCCCACATGCTGCTGTTGGATGAGCCAACTAACCATCTTGATATTGAGACCATT
GACTCACTTGCAGAGGCCTTGAACGCATGGGATGGTGGGATGGTTCTAGTGAGTCACGAC
TTTAGGCTCATAAATCAGGTGGCCCATGAGATATGGGTATGTGAAAATCAGGCTGTGACA
CGATGGGAGGGTGGCATCATGGAGTTCAAGAAACACTTGAAGAAAAGGGCTGGATTGGGT
GATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400014286
PEP Infomation

pacid=37465335 transcript=PGSC0003DMT400020972 locus=PGSC0003DMG400008119 ID=PGSC0003DMT400020972.v4.03 annot-version=v4.03
Sequence

MVSDAAKKRDAQKKAAAAARRGGKGAAASKSAATASKSAGESNGVDNLTNGVGDLQISDR
TCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAI
GLRELPIPDHMDIFHLSREIDASDMTSLEAVINCDEERLQLEKEAEALAAQDDGGGEQLE
RIYERLEAMDAATAEKRAAEILFGLGFDKKMQAKKTRDFSGGWRMRIALARALFMNPTIL
LLDEPTNHLDLEACVWLEESLKNFERILVVISHSQDFLNGVCTNIIHMQNKKLKLYTGNY
DQYVQTRSELEENQMKQYKWEQEQISAMKEYIARFGHGSAKLARQAQSKEKTLAKMERGG
LTEKVGRDSVLVFRFTDVGKLPPPVLQFSEVAFGYTPENLIYKNLDFGVDLDSRVALVGP
NGAGKSTLLKLMIGELFPTDGMVKRHNHLKIAQYHQHLTEKLDMEVSALLYMMREYPGNE
EEKMRAAIGRFGLTGKAQVMAMKNLSDGQRSRVIFAWLAFRQPHMLLLDEPTNHLDIETI
DSLAEALNAWDGGMVLVSHDFRLINQVAHEIWVCENQAVTRWEGGIMEFKKHLKKRAGLG
D*

Transcript Sequence

Transcript ID

PGSC0003DMT400020972
Transcript Infomation

pacid=37465335 locus=PGSC0003DMG400008119 ID=PGSC0003DMT400020972.v4.03 annot-version=v4.03
Sequence

ATGGTGTCGGATGCGGCGAAGAAGAGAGATGCGCAGAAGAAGGCGGCAGCAGCTGCTAGG
AGAGGAGGTAAAGGTGCGGCAGCGTCTAAATCGGCTGCGACGGCGTCTAAATCTGCGGGG
GAAAGTAACGGGGTTGATAATTTGACGAATGGAGTAGGGGATCTACAGATATCTGATCGG
ACTTGTACGGGTGTTTTATGTTCACATCCGCTATCGAGGGATATTCGGATAGAATCATTA
TCAGTCACTTTCCACGGACATGATCTAATCGTTGATTCTGAACTGGAGCTCAACTATGGC
AGACGTTATGGTTTGTTGGGATTGAATGGCTGCGGGAAGTCTACTCTTCTTACCGCTATA
GGGTTGAGGGAACTTCCCATCCCAGACCACATGGATATTTTTCATCTTTCTCGGGAGATT
GATGCCTCTGACATGACCTCTCTCGAGGCCGTCATTAATTGTGATGAAGAGAGGTTGCAA
TTGGAGAAAGAAGCTGAAGCTTTGGCTGCACAGGATGATGGTGGTGGAGAGCAACTTGAA
CGGATCTATGAGCGTTTAGAAGCTATGGATGCTGCCACTGCTGAGAAACGTGCTGCTGAA
ATCTTGTTTGGGCTTGGATTTGATAAGAAAATGCAAGCAAAGAAAACACGCGATTTTTCT
GGTGGCTGGAGAATGAGGATTGCTCTTGCCCGTGCCCTCTTTATGAATCCAACAATTTTG
TTGCTTGATGAGCCAACAAACCATCTTGACCTAGAAGCCTGTGTGTGGTTAGAAGAATCC
TTGAAGAACTTTGAGCGCATTCTGGTTGTCATTTCACACTCACAGGATTTTCTCAATGGT
GTGTGTACCAATATCATCCACATGCAAAACAAGAAGTTGAAACTCTATACAGGTAACTAC
GACCAATATGTGCAAACCCGTTCAGAGCTGGAAGAGAACCAGATGAAACAGTACAAGTGG
GAGCAGGAGCAGATTTCTGCAATGAAGGAATACATTGCTCGCTTTGGGCACGGTTCAGCT
AAACTAGCCCGTCAAGCACAGAGTAAAGAGAAGACATTGGCTAAGATGGAGCGTGGTGGG
CTTACTGAGAAGGTGGGGAGGGACAGCGTCCTGGTTTTCCGGTTTACTGATGTCGGCAAA
CTTCCTCCTCCAGTTCTACAGTTTTCTGAAGTTGCTTTTGGCTACACACCTGAAAACCTC
ATCTACAAGAACCTTGATTTTGGTGTAGATCTCGACTCCAGGGTAGCACTTGTAGGGCCT
AATGGAGCTGGAAAGAGCACACTGCTTAAGCTGATGATAGGGGAGTTATTTCCCACTGAT
GGCATGGTTAAGCGGCATAATCACCTAAAAATTGCACAGTACCACCAGCACTTGACTGAG
AAGCTAGACATGGAGGTGTCAGCTCTTTTGTACATGATGAGAGAGTACCCTGGGAATGAG
GAGGAGAAGATGAGGGCAGCAATTGGGAGGTTTGGACTCACAGGTAAAGCTCAAGTAATG
GCTATGAAGAACTTGTCAGATGGTCAACGTAGTCGGGTGATCTTTGCATGGTTGGCTTTT
AGACAACCCCACATGCTGCTGTTGGATGAGCCAACTAACCATCTTGATATTGAGACCATT
GACTCACTTGCAGAGGCCTTGAACGCATGGGATGGTGGGATGGTTCTAGTGAGTCACGAC
TTTAGGCTCATAAATCAGGTGGCCCATGAGATATGGGTATGTGAAAATCAGGCTGTGACA
CGATGGGAGGGTGGCATCATGGAGTTCAAGAAACACTTGAAGAAAAGGGCTGGATTGGGT
GATTAA