Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020944
CDS Infomation

pacid=37466860 polypeptide=PGSC0003DMP400014267 locus=PGSC0003DMG400008109 ID=PGSC0003DMT400020944.v4.03 annot-version=v4.03
Sequence

ATGGAAAGAAAAAGTGGGTATTGTTTATCAGTTATAATGTTAGTGTTTGGAGTGGTTTTC
TTGCATTGTTTGGTGATGACGTCATTTGCCGCTAGTGTGACGTATGATCACCGGGCATTG
GTTATTGACGGAAAGAGAAGAGTTTTGATCTCCGGTTCAATACATTATCCTCGGAGTACT
CCTGATATGTGGCCAGACCTTATACAGAAATCAAAAGATGGAGGATTGGATGTTATAGAG
ACTTATGTTTTCTGGAACCTTCATGAACCTGTTCGAAATCTGTATGATTTTGAAGGAAGG
AAAGATTTGATTAATTTTGTGAAGTTGGTGGAGAAAGCTGGCTTATTTGTTCATATAAGG
ATTGGGCCTTATGTTTGTGCAGAATGGAACTATGGTGGGTTTCCTCTTTGGTTGCATTTC
ATTCCTGGAATTGAATTTCGAACCGACAATGAACCATTCAAGGCAGAAATGAAGCGATTC
ACGACTAAAATTGTTGACATGATCAAGCAAGAAAATCTTTTTGCATCCCAGGGTGGGCCG
GTTATCTTGTCTCAGATAGAAAATGAGTATGGCAATGGTGATATTGAGTCTCGTTATGGT
CCTCGTGCCAAACCTTACGTGAACTGGGCAGCATCAATGGCTACGACTTTGGATACGGGA
GTGCCATGGGTTATGTGTCAGCAACCAGATGCCCCTCCTTCCGTTATTAACACTTGCAAT
GGATTTTATTGTGACCAATTCAAGCAAAATTCTGATAAAACACCCAAGATGTGGACTGAG
AATTGGACCGGATGGTTTCTGTCTTTTGGTGGTCCTGTCCCTTACAGACCTGTGGAAGAC
ATTGCTTTCGCTGTGGCTCGATTTTTCCAGCGAGGCGGAACCTTCCAGAACTATTACATG
TACCACGGGGGAACTAACTTTGGCCGAACCAGTGGTGGACCGTTTATTGCAACTAGCTAT
GACTATGATGCTCCTTTAGATGAGTACGGGCTTATAAGACAACCAAAATGGGGTCACTTG
AAAGATCTCCATAAAGCCATAAAGCTTTGTGAGGCTGCAATGGTGGCAACTGATCCAAAC
ATCACTTCTCTGGGCTCTACTATAGAGGCCAGTGTTTATAAAACTGATTCACAGTGTGCT
GCATTTCTCGCCAATACTGCTACGCAATCTGATGCGGCTGTGAGCTTCAATGGAAACTCA
TATCATTTACCTCCATGGTCCGTCAGCATTTTACCTGACTGCAAGAATGTTGCTTTTAAT
ACTGCAAAGATTAATTCTGTATCAACCATCTCAACATTTGTTACTCAGTCTTCAGAAGCT
GATGCATCTGGCGCATCCCTATCAGGTTGGACTTCAGTTAATGAGCCTGTAGGCATCTCA
AGTGAAAATGCATTCACAAGAATGGGGTTGGTGGAACAGATAAATATTACAGCTGATAAA
AGCGATTATCTCTGGTACTCCCTGAGTGTCAATATAAAAAATGATGAGCCTTTCCTTCAA
GATGGATCTGCAACGGTACTTCATGTGAAAACACTTGGTCATGTTCTTCATGCTTTCATT
AATGGAAAGCTATCAGGTAACGGAAATAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400014267
PEP Infomation

pacid=37466860 transcript=PGSC0003DMT400020944 locus=PGSC0003DMG400008109 ID=PGSC0003DMT400020944.v4.03 annot-version=v4.03
Sequence

MERKSGYCLSVIMLVFGVVFLHCLVMTSFAASVTYDHRALVIDGKRRVLISGSIHYPRST
PDMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNLYDFEGRKDLINFVKLVEKAGLFVHIR
IGPYVCAEWNYGGFPLWLHFIPGIEFRTDNEPFKAEMKRFTTKIVDMIKQENLFASQGGP
VILSQIENEYGNGDIESRYGPRAKPYVNWAASMATTLDTGVPWVMCQQPDAPPSVINTCN
GFYCDQFKQNSDKTPKMWTENWTGWFLSFGGPVPYRPVEDIAFAVARFFQRGGTFQNYYM
YHGGTNFGRTSGGPFIATSYDYDAPLDEYGLIRQPKWGHLKDLHKAIKLCEAAMVATDPN
ITSLGSTIEASVYKTDSQCAAFLANTATQSDAAVSFNGNSYHLPPWSVSILPDCKNVAFN
TAKINSVSTISTFVTQSSEADASGASLSGWTSVNEPVGISSENAFTRMGLVEQINITADK
SDYLWYSLSVNIKNDEPFLQDGSATVLHVKTLGHVLHAFINGKLSGNGNK*

Transcript Sequence

Transcript ID

PGSC0003DMT400020944
Transcript Infomation

pacid=37466860 locus=PGSC0003DMG400008109 ID=PGSC0003DMT400020944.v4.03 annot-version=v4.03
Sequence

ATGGAAAGAAAAAGTGGGTATTGTTTATCAGTTATAATGTTAGTGTTTGGAGTGGTTTTC
TTGCATTGTTTGGTGATGACGTCATTTGCCGCTAGTGTGACGTATGATCACCGGGCATTG
GTTATTGACGGAAAGAGAAGAGTTTTGATCTCCGGTTCAATACATTATCCTCGGAGTACT
CCTGATATGTGGCCAGACCTTATACAGAAATCAAAAGATGGAGGATTGGATGTTATAGAG
ACTTATGTTTTCTGGAACCTTCATGAACCTGTTCGAAATCTGTATGATTTTGAAGGAAGG
AAAGATTTGATTAATTTTGTGAAGTTGGTGGAGAAAGCTGGCTTATTTGTTCATATAAGG
ATTGGGCCTTATGTTTGTGCAGAATGGAACTATGGTGGGTTTCCTCTTTGGTTGCATTTC
ATTCCTGGAATTGAATTTCGAACCGACAATGAACCATTCAAGGCAGAAATGAAGCGATTC
ACGACTAAAATTGTTGACATGATCAAGCAAGAAAATCTTTTTGCATCCCAGGGTGGGCCG
GTTATCTTGTCTCAGATAGAAAATGAGTATGGCAATGGTGATATTGAGTCTCGTTATGGT
CCTCGTGCCAAACCTTACGTGAACTGGGCAGCATCAATGGCTACGACTTTGGATACGGGA
GTGCCATGGGTTATGTGTCAGCAACCAGATGCCCCTCCTTCCGTTATTAACACTTGCAAT
GGATTTTATTGTGACCAATTCAAGCAAAATTCTGATAAAACACCCAAGATGTGGACTGAG
AATTGGACCGGATGGTTTCTGTCTTTTGGTGGTCCTGTCCCTTACAGACCTGTGGAAGAC
ATTGCTTTCGCTGTGGCTCGATTTTTCCAGCGAGGCGGAACCTTCCAGAACTATTACATG
TACCACGGGGGAACTAACTTTGGCCGAACCAGTGGTGGACCGTTTATTGCAACTAGCTAT
GACTATGATGCTCCTTTAGATGAGTACGGGCTTATAAGACAACCAAAATGGGGTCACTTG
AAAGATCTCCATAAAGCCATAAAGCTTTGTGAGGCTGCAATGGTGGCAACTGATCCAAAC
ATCACTTCTCTGGGCTCTACTATAGAGGCCAGTGTTTATAAAACTGATTCACAGTGTGCT
GCATTTCTCGCCAATACTGCTACGCAATCTGATGCGGCTGTGAGCTTCAATGGAAACTCA
TATCATTTACCTCCATGGTCCGTCAGCATTTTACCTGACTGCAAGAATGTTGCTTTTAAT
ACTGCAAAGATTAATTCTGTATCAACCATCTCAACATTTGTTACTCAGTCTTCAGAAGCT
GATGCATCTGGCGCATCCCTATCAGGTTGGACTTCAGTTAATGAGCCTGTAGGCATCTCA
AGTGAAAATGCATTCACAAGAATGGGGTTGGTGGAACAGATAAATATTACAGCTGATAAA
AGCGATTATCTCTGGTACTCCCTGAGTGTCAATATAAAAAATGATGAGCCTTTCCTTCAA
GATGGATCTGCAACGGTACTTCATGTGAAAACACTTGGTCATGTTCTTCATGCTTTCATT
AATGGAAAGCTATCAGGTAACGGAAATAAATGA