Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020896
CDS Infomation

pacid=37466445 polypeptide=PGSC0003DMP400014237 locus=PGSC0003DMG400008091 ID=PGSC0003DMT400020896.v4.03 annot-version=v4.03
Sequence

ATGGGGAGTAAATGGAGAAAAGCAAAGCTTGCATTGGGTTTAAATACATGTCTTTATATT
CCAAAAACACTTGAAGATTCACCGGCGACGGCGTCGGCGTCGGCGTCGACGGTGACCGGA
GGGAGATTATTCGATGCTGTTTCATTGTCTCCGACGACCCCAAATAGAAATTCCGACTGT
CATGTTGATATGCCCACCACACCCACCCCTTCATCCTCTGGTCTTCGTATGCCTAAACAT
CATAACTCCAAATCTTCTAAGAGTACTTGTGCGATATGTTTGATGTCGATGAAACCAGGC
CAAGGTCATGCAATCTTTACAGCAGAATGCTCACATTCATTTCATTTCAACTGTATCACT
TCAAATGTAAAGCATGGAAACCAAATTTGTCCAGTTTGCAGAGCAAAATGGAAAGAAATA
CCCTTTCAGAGTCCTCTTACAGATATATCACAGCCAAGGTCTCGGAACGGACAAGTACAT
TGGCCTCAACATGATGCCTGGATGACAGTTGTAAGACAGGTCCCTCCTGCACGATTGGAT
ACCAATCGCAATATTTCTAATCTTTTTCAAACTGTGGAACCAAGTGTGTTTGATGATGAT
GAAGTTGTTGATCACCGACCCATGGGCAGCCAGAAAAACTCGTCAACTGATGCGACTAAT
CATCATTCTATGGGGGCTATAGAAGTTAAAACATGGCCGGAGATCTCTGCAGTTACAAAA
TCAGCATCTCACAGCAATTTTGCTGTTTTGGTGCATCTCAAAGCCCCTCACGCTGTTGGC
CTTCTAAACCAGAGTGGGATGCCAGTTACAGGTCAGAATTCCCGAGCTCCGGTTGATCTT
GTGACTGTTCTTGATGTTAGTGGCAGCATGGCTGGTACCAAACTTGCTTTGCTAAAGAGA
GCAATGGGGTTTGTGATTCAAAATTTAGGCCCTGCTGACAGGCTTTCTGTCATTGCCTTC
TCTTCTACTGCTCGTCGTCTCTTTCCTCTGCGTAGGATGAGCGATACTGGCAAGCAAGAA
GCACTACAGGCCGTGAATTCACTCAGCTCTAATGGTGGGACAAACATTGCCGAGGCCCTA
AAGAAGAGTGCCAAGATCATGACTGATCGCAAGTGGAAAAATCCAGTTAGCAGCATAATA
CTGTTGTCTGATGGACAAGACACGTATACCATTAACAGTCCTAGTGTAGCTGCTATGCAG
ACAAATTATCGGTCATTACTTCCTGCTTGCATGCAGCGTAATGCAGCTTCTTCAGGTCTC
CATATTCCAGTCCACGCATTTGGTTTTGGTGCTGACCACGATGCAGTCTCAATGCACTCA
ATCTCTGAAACTTCAGGTGGAACATTTTCCTTCATAGAAGCTGAGAATGTTATTCAAGAT
GCTTTTGCTCAGTGCATAGGTGGCCTTTTAAGCGTGGTGGTTCAGGAATTGCGTGTGGAA
GTTGAATGCGTTCACCCTGTTTTGCGTCTCAATTCAATAAAAGCTGGAAGTTACAATGCT
AGTTTAGCATCTGATAACAAAAGTGGCAATATTGAAGTTGGAGACTTATATGCAGATGAA
GAAAGAGATTTCTTGGTCATGTTAGATATTCCTGCTGATAGATCGAGCAACGATATGATG
ACCCTTGTAAAAGTTAAGTGTACATATAAAGACCCGACACAATCGGACAACTCAGATTTA
GTAACCTTGGATCATATTGATGATGTCAAAATTGAGAGGCCCGACACAATCGGACAACTT
ATTGTGTCAATGGAAGTTGACAAGCAGCGTAACCGGCTTCAATCAGCAGAAGCTATGGCT
GAAGCAAGATCTGCAGCTGAAAATGGTGATTTAGCAGCTGCAGTATCTGTTCTTGAGCGT
TGTCGGAAAAAATTGTCAGAAACAGTGTCTGCTAAAGCTGGAGACAGGCTATGTCTTGCA
CTAGATGCTGAGCTGAAGGAAATGCAAGAGAGGATGGCAAATCGTCGTGTTTATGAAACA
TCTGGTAGAGCTTACGTTCTGTCAGGACTAAGTTCACATTCATGGCAGAGAGCAACAGCT
CGCGGTGATTCTACTGATAGTACAAGCCTCATTCAGGCTTACCAGACACCATCCATGATG
GACATGGTTAGCCGATCACAGACAATGTACCTCGGTAGTCCAGCTCCTCGACCACCTCTA
AGGCCACTACGATCATTTCCTGCACGACAACAGCCTAGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400014237
PEP Infomation

pacid=37466445 transcript=PGSC0003DMT400020896 locus=PGSC0003DMG400008091 ID=PGSC0003DMT400020896.v4.03 annot-version=v4.03
Sequence

MGSKWRKAKLALGLNTCLYIPKTLEDSPATASASASTVTGGRLFDAVSLSPTTPNRNSDC
HVDMPTTPTPSSSGLRMPKHHNSKSSKSTCAICLMSMKPGQGHAIFTAECSHSFHFNCIT
SNVKHGNQICPVCRAKWKEIPFQSPLTDISQPRSRNGQVHWPQHDAWMTVVRQVPPARLD
TNRNISNLFQTVEPSVFDDDEVVDHRPMGSQKNSSTDATNHHSMGAIEVKTWPEISAVTK
SASHSNFAVLVHLKAPHAVGLLNQSGMPVTGQNSRAPVDLVTVLDVSGSMAGTKLALLKR
AMGFVIQNLGPADRLSVIAFSSTARRLFPLRRMSDTGKQEALQAVNSLSSNGGTNIAEAL
KKSAKIMTDRKWKNPVSSIILLSDGQDTYTINSPSVAAMQTNYRSLLPACMQRNAASSGL
HIPVHAFGFGADHDAVSMHSISETSGGTFSFIEAENVIQDAFAQCIGGLLSVVVQELRVE
VECVHPVLRLNSIKAGSYNASLASDNKSGNIEVGDLYADEERDFLVMLDIPADRSSNDMM
TLVKVKCTYKDPTQSDNSDLVTLDHIDDVKIERPDTIGQLIVSMEVDKQRNRLQSAEAMA
EARSAAENGDLAAAVSVLERCRKKLSETVSAKAGDRLCLALDAELKEMQERMANRRVYET
SGRAYVLSGLSSHSWQRATARGDSTDSTSLIQAYQTPSMMDMVSRSQTMYLGSPAPRPPL
RPLRSFPARQQPR*

Transcript Sequence

Transcript ID

PGSC0003DMT400020896
Transcript Infomation

pacid=37466445 locus=PGSC0003DMG400008091 ID=PGSC0003DMT400020896.v4.03 annot-version=v4.03
Sequence

ATGGGGAGTAAATGGAGAAAAGCAAAGCTTGCATTGGGTTTAAATACATGTCTTTATATT
CCAAAAACACTTGAAGATTCACCGGCGACGGCGTCGGCGTCGGCGTCGACGGTGACCGGA
GGGAGATTATTCGATGCTGTTTCATTGTCTCCGACGACCCCAAATAGAAATTCCGACTGT
CATGTTGATATGCCCACCACACCCACCCCTTCATCCTCTGGTCTTCGTATGCCTAAACAT
CATAACTCCAAATCTTCTAAGAGTACTTGTGCGATATGTTTGATGTCGATGAAACCAGGC
CAAGGTCATGCAATCTTTACAGCAGAATGCTCACATTCATTTCATTTCAACTGTATCACT
TCAAATGTAAAGCATGGAAACCAAATTTGTCCAGTTTGCAGAGCAAAATGGAAAGAAATA
CCCTTTCAGAGTCCTCTTACAGATATATCACAGCCAAGGTCTCGGAACGGACAAGTACAT
TGGCCTCAACATGATGCCTGGATGACAGTTGTAAGACAGGTCCCTCCTGCACGATTGGAT
ACCAATCGCAATATTTCTAATCTTTTTCAAACTGTGGAACCAAGTGTGTTTGATGATGAT
GAAGTTGTTGATCACCGACCCATGGGCAGCCAGAAAAACTCGTCAACTGATGCGACTAAT
CATCATTCTATGGGGGCTATAGAAGTTAAAACATGGCCGGAGATCTCTGCAGTTACAAAA
TCAGCATCTCACAGCAATTTTGCTGTTTTGGTGCATCTCAAAGCCCCTCACGCTGTTGGC
CTTCTAAACCAGAGTGGGATGCCAGTTACAGGTCAGAATTCCCGAGCTCCGGTTGATCTT
GTGACTGTTCTTGATGTTAGTGGCAGCATGGCTGGTACCAAACTTGCTTTGCTAAAGAGA
GCAATGGGGTTTGTGATTCAAAATTTAGGCCCTGCTGACAGGCTTTCTGTCATTGCCTTC
TCTTCTACTGCTCGTCGTCTCTTTCCTCTGCGTAGGATGAGCGATACTGGCAAGCAAGAA
GCACTACAGGCCGTGAATTCACTCAGCTCTAATGGTGGGACAAACATTGCCGAGGCCCTA
AAGAAGAGTGCCAAGATCATGACTGATCGCAAGTGGAAAAATCCAGTTAGCAGCATAATA
CTGTTGTCTGATGGACAAGACACGTATACCATTAACAGTCCTAGTGTAGCTGCTATGCAG
ACAAATTATCGGTCATTACTTCCTGCTTGCATGCAGCGTAATGCAGCTTCTTCAGGTCTC
CATATTCCAGTCCACGCATTTGGTTTTGGTGCTGACCACGATGCAGTCTCAATGCACTCA
ATCTCTGAAACTTCAGGTGGAACATTTTCCTTCATAGAAGCTGAGAATGTTATTCAAGAT
GCTTTTGCTCAGTGCATAGGTGGCCTTTTAAGCGTGGTGGTTCAGGAATTGCGTGTGGAA
GTTGAATGCGTTCACCCTGTTTTGCGTCTCAATTCAATAAAAGCTGGAAGTTACAATGCT
AGTTTAGCATCTGATAACAAAAGTGGCAATATTGAAGTTGGAGACTTATATGCAGATGAA
GAAAGAGATTTCTTGGTCATGTTAGATATTCCTGCTGATAGATCGAGCAACGATATGATG
ACCCTTGTAAAAGTTAAGTGTACATATAAAGACCCGACACAATCGGACAACTCAGATTTA
GTAACCTTGGATCATATTGATGATGTCAAAATTGAGAGGCCCGACACAATCGGACAACTT
ATTGTGTCAATGGAAGTTGACAAGCAGCGTAACCGGCTTCAATCAGCAGAAGCTATGGCT
GAAGCAAGATCTGCAGCTGAAAATGGTGATTTAGCAGCTGCAGTATCTGTTCTTGAGCGT
TGTCGGAAAAAATTGTCAGAAACAGTGTCTGCTAAAGCTGGAGACAGGCTATGTCTTGCA
CTAGATGCTGAGCTGAAGGAAATGCAAGAGAGGATGGCAAATCGTCGTGTTTATGAAACA
TCTGGTAGAGCTTACGTTCTGTCAGGACTAAGTTCACATTCATGGCAGAGAGCAACAGCT
CGCGGTGATTCTACTGATAGTACAAGCCTCATTCAGGCTTACCAGACACCATCCATGATG
GACATGGTTAGCCGATCACAGACAATGTACCTCGGTAGTCCAGCTCCTCGACCACCTCTA
AGGCCACTACGATCATTTCCTGCACGACAACAGCCTAGGTGA