Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400020895
CDS Infomation

pacid=37467526 polypeptide=PGSC0003DMP400014236 locus=PGSC0003DMG400008090 ID=PGSC0003DMT400020895.v4.03 annot-version=v4.03
Sequence

ATGAGGGGTCGAAAGGAAGCAGCAATTGCTTTCATCATTAGCTTGGTGTGGATACAGCAA
ATTGTTGGCGATGAACAAGTGCGTAATCAATCAGTAACAAGTAATTGGACCTGCAGCTGT
CTCGCCAACCCAAGTTTTGCTGTTCCAGAAAACTGTTCATCATCCTGTGATTGCACTATT
GACGAATCAAGCAAGAACAAATGGATATGTATATGTGCAGCTGATGGATTTCCTAGAGTG
GCTACTGATCATAATCACAGCAGCTGTTTTACAGCCTGTGATTGCCGTTATGGAACTCAA
CTTGAAACGCAATCTGCAAAGAAGAAGATATCCAGCAAAGTTATTTTGGTCATTCTCTTA
TTATGTGCAACGGTCATAACTCTTGGTTTTGTTGCGTCGATGTTGTGCTATGCCTATAGA
AAGGATAAATATTCTATTCAACGATCTCTATTTTCGTCCGACAAATATACAAGTTGCAAC
AGTGCTACCAACTTAATACTAAGCCAAGGAACTACAACTGGAGAACATGGAGGATACATA
AGTTCCTCCAACTGTATTGCAGGTTGTGTTCCCAAAGCATCTATTTTTTTCAAAAGAAAA
CCAGAAGTGTTTTACGGAACGATTATTCAATTTTCATATGCCGACTTAGAGAGTGCAACC
AATAAGTTCTCTGATTCCAATTTGATTGGGGTGGGAGGAAGCAGCTGCGTATACCGTGGT
CATTTCAAAGATGGAAAAGCTCTGGCAATTAAGCGAATTAAAACTCAGGCAGGGCGGGAC
GCTGACTCTGCTTTCTTGACAGAGATAGAACTCATTTCAAGACTTCATCATCGTCATGTG
GTTCCGTTGCTTGGCTACTGCTCCGAGCATCACGGTAAACATGCAGAGAGGCTGCTTGTT
TTCGAATTCATGGAAAATGGCAATCTGAGAGATTGTCTGGATGGGGATTCTGGGAGATAT
CTGGATTGGAGCACACGGGTCGCAGTTGCTTTTGGAGCTGCACGTGGTTTGGAGTATCTT
CATGAAGCAGCTGCACCAAGAATCTTACACCGAGATGTTAAGTCTACCAACGTCCTATTG
GATGATAACTATAGAGCTAAGATTACTGATCTTGGCATGGCGAAGCACCTCCAAAATGAT
GGTATTCCTAGCTGTTCCAGCTCTCCTGCGCGGATGCAGGGGACATTTGGCTATTTTGCA
CCTGAATATGCAATTATTGGAAGAGCTTCTCTGAAGTCGGATGTTTTTAGCTTTGGAGTT
GTGCTCCTTGAACTGATAACCGGACGACAACCAATCCATAAATCAGCCAACAAAGCAGAA
GAAAGCCTCGTGATATGGGCCACCCCTCGTCTACTAGACAGTAGACGTGTGGTCTCAGAA
TTGCCTGATCCAAATCTGAACGGGGATTTTGAAGAGGAAGAATTGCAGGTAATGGCTTAC
TTGGCTAAGGAGTGTCTTCTACTGGACCCAGATTCTCGGCCAACTATGAGTGAAGTTGTT
CAAATTTTGTCAACTATTGCACCTGAAACATCTAATCGGAAACACTTTTCGAGAGATGAC
TTCAAGGGCTCATTCAGTTATGACAACAAGAGTAATGGAGAAAGTTCCGGCTTTGTTGAA
GCCGAGGAGATCAAGCAAATCACATCTGAGAATCGCGCAGCTCACTGCTTGTTGCCAAAT
TGTGCATTCATTCATTGTAGTGATCCAAAAGAAGACGTTATACCAGCTGCATATGTCGAA
AATCTGCTCCTCCAGAGTTCAAATTCCAAATGTTGGAGTGCACATGATGATGAATCAGTG
GATCTAACTGAACCGCGATTTGAGAAATTTCATATGCCAACAGTACACATGAACAAGTGT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400014236
PEP Infomation

pacid=37467526 transcript=PGSC0003DMT400020895 locus=PGSC0003DMG400008090 ID=PGSC0003DMT400020895.v4.03 annot-version=v4.03
Sequence

MRGRKEAAIAFIISLVWIQQIVGDEQVRNQSVTSNWTCSCLANPSFAVPENCSSSCDCTI
DESSKNKWICICAADGFPRVATDHNHSSCFTACDCRYGTQLETQSAKKKISSKVILVILL
LCATVITLGFVASMLCYAYRKDKYSIQRSLFSSDKYTSCNSATNLILSQGTTTGEHGGYI
SSSNCIAGCVPKASIFFKRKPEVFYGTIIQFSYADLESATNKFSDSNLIGVGGSSCVYRG
HFKDGKALAIKRIKTQAGRDADSAFLTEIELISRLHHRHVVPLLGYCSEHHGKHAERLLV
FEFMENGNLRDCLDGDSGRYLDWSTRVAVAFGAARGLEYLHEAAAPRILHRDVKSTNVLL
DDNYRAKITDLGMAKHLQNDGIPSCSSSPARMQGTFGYFAPEYAIIGRASLKSDVFSFGV
VLLELITGRQPIHKSANKAEESLVIWATPRLLDSRRVVSELPDPNLNGDFEEEELQVMAY
LAKECLLLDPDSRPTMSEVVQILSTIAPETSNRKHFSRDDFKGSFSYDNKSNGESSGFVE
AEEIKQITSENRAAHCLLPNCAFIHCSDPKEDVIPAAYVENLLLQSSNSKCWSAHDDESV
DLTEPRFEKFHMPTVHMNKC*

Transcript Sequence

Transcript ID

PGSC0003DMT400020895
Transcript Infomation

pacid=37467526 locus=PGSC0003DMG400008090 ID=PGSC0003DMT400020895.v4.03 annot-version=v4.03
Sequence

ATGAGGGGTCGAAAGGAAGCAGCAATTGCTTTCATCATTAGCTTGGTGTGGATACAGCAA
ATTGTTGGCGATGAACAAGTGCGTAATCAATCAGTAACAAGTAATTGGACCTGCAGCTGT
CTCGCCAACCCAAGTTTTGCTGTTCCAGAAAACTGTTCATCATCCTGTGATTGCACTATT
GACGAATCAAGCAAGAACAAATGGATATGTATATGTGCAGCTGATGGATTTCCTAGAGTG
GCTACTGATCATAATCACAGCAGCTGTTTTACAGCCTGTGATTGCCGTTATGGAACTCAA
CTTGAAACGCAATCTGCAAAGAAGAAGATATCCAGCAAAGTTATTTTGGTCATTCTCTTA
TTATGTGCAACGGTCATAACTCTTGGTTTTGTTGCGTCGATGTTGTGCTATGCCTATAGA
AAGGATAAATATTCTATTCAACGATCTCTATTTTCGTCCGACAAATATACAAGTTGCAAC
AGTGCTACCAACTTAATACTAAGCCAAGGAACTACAACTGGAGAACATGGAGGATACATA
AGTTCCTCCAACTGTATTGCAGGTTGTGTTCCCAAAGCATCTATTTTTTTCAAAAGAAAA
CCAGAAGTGTTTTACGGAACGATTATTCAATTTTCATATGCCGACTTAGAGAGTGCAACC
AATAAGTTCTCTGATTCCAATTTGATTGGGGTGGGAGGAAGCAGCTGCGTATACCGTGGT
CATTTCAAAGATGGAAAAGCTCTGGCAATTAAGCGAATTAAAACTCAGGCAGGGCGGGAC
GCTGACTCTGCTTTCTTGACAGAGATAGAACTCATTTCAAGACTTCATCATCGTCATGTG
GTTCCGTTGCTTGGCTACTGCTCCGAGCATCACGGTAAACATGCAGAGAGGCTGCTTGTT
TTCGAATTCATGGAAAATGGCAATCTGAGAGATTGTCTGGATGGGGATTCTGGGAGATAT
CTGGATTGGAGCACACGGGTCGCAGTTGCTTTTGGAGCTGCACGTGGTTTGGAGTATCTT
CATGAAGCAGCTGCACCAAGAATCTTACACCGAGATGTTAAGTCTACCAACGTCCTATTG
GATGATAACTATAGAGCTAAGATTACTGATCTTGGCATGGCGAAGCACCTCCAAAATGAT
GGTATTCCTAGCTGTTCCAGCTCTCCTGCGCGGATGCAGGGGACATTTGGCTATTTTGCA
CCTGAATATGCAATTATTGGAAGAGCTTCTCTGAAGTCGGATGTTTTTAGCTTTGGAGTT
GTGCTCCTTGAACTGATAACCGGACGACAACCAATCCATAAATCAGCCAACAAAGCAGAA
GAAAGCCTCGTGATATGGGCCACCCCTCGTCTACTAGACAGTAGACGTGTGGTCTCAGAA
TTGCCTGATCCAAATCTGAACGGGGATTTTGAAGAGGAAGAATTGCAGGTAATGGCTTAC
TTGGCTAAGGAGTGTCTTCTACTGGACCCAGATTCTCGGCCAACTATGAGTGAAGTTGTT
CAAATTTTGTCAACTATTGCACCTGAAACATCTAATCGGAAACACTTTTCGAGAGATGAC
TTCAAGGGCTCATTCAGTTATGACAACAAGAGTAATGGAGAAAGTTCCGGCTTTGTTGAA
GCCGAGGAGATCAAGCAAATCACATCTGAGAATCGCGCAGCTCACTGCTTGTTGCCAAAT
TGTGCATTCATTCATTGTAGTGATCCAAAAGAAGACGTTATACCAGCTGCATATGTCGAA
AATCTGCTCCTCCAGAGTTCAAATTCCAAATGTTGGAGTGCACATGATGATGAATCAGTG
GATCTAACTGAACCGCGATTTGAGAAATTTCATATGCCAACAGTACACATGAACAAGTGT
TGA